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Pay0013980 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0013980
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRibosome biogenesis protein BRX1-like protein
Genome locationchr07:11619030..11622001
RNA-Seq ExpressionPay0013980
SyntenyPay0013980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031641.1 ribosome biogenesis protein BRX1-like protein [Cucumis melo var. makuwa]1.1e-1657.43Show/hide
Query:  RSGRLMKAKRVNKNENALFCGPKQKERISMAKGCSFSKNRCNECN----GRIEAYRELSERFPSN------------------------LTFSSNFDKDV
        RSGRLMKAKRVNKNENALFCGPKQKERISMAKGCSFSKNRCNE N     R    + L+  F ++                        LTFSSNFDKDV
Subjt:  RSGRLMKAKRVNKNENALFCGPKQKERISMAKGCSFSKNRCNECN----GRIEAYRELSERFPSN------------------------LTFSSNFDKDV

Query:  V
        +
Subjt:  V
XP_016899860.1 PREDICTED: uncharacterized protein LOC103487553 [Cucumis melo]9.3e-4889.74Show/hide
Query:  MPPLSAVRCTAVRPLSPPNE------SVLQTVLPDKNEKLQDKTRSGRLMKAKRVNKNENALFCGPKQKERISMAKGCSFSKNRCNECNGRIEAYRELSE
        MP LSAVR TAVRPLS PNE      SVLQTVLPDKN+KL DKTRSGRLMKAKRVNKNENALFCGPKQKERISMAKGCSFSKNRCNECNGRIEAYRELSE
Subjt:  MPPLSAVRCTAVRPLSPPNE------SVLQTVLPDKNEKLQDKTRSGRLMKAKRVNKNENALFCGPKQKERISMAKGCSFSKNRCNECNGRIEAYRELSE

Query:  RFPSNLTFSSNFDKDVV
        RFPSNLTFSSNFDKDV+
Subjt:  RFPSNLTFSSNFDKDVV
TrEMBL top hitse value%identityAlignment
A0A1S4DVW8 uncharacterized protein LOC1034875534.5e-4889.74Show/hide
Query:  MPPLSAVRCTAVRPLSPPNE------SVLQTVLPDKNEKLQDKTRSGRLMKAKRVNKNENALFCGPKQKERISMAKGCSFSKNRCNECNGRIEAYRELSE
        MP LSAVR TAVRPLS PNE      SVLQTVLPDKN+KL DKTRSGRLMKAKRVNKNENALFCGPKQKERISMAKGCSFSKNRCNECNGRIEAYRELSE
Subjt:  MPPLSAVRCTAVRPLSPPNE------SVLQTVLPDKNEKLQDKTRSGRLMKAKRVNKNENALFCGPKQKERISMAKGCSFSKNRCNECNGRIEAYRELSE

Query:  RFPSNLTFSSNFDKDVV
        RFPSNLTFSSNFDKDV+
Subjt:  RFPSNLTFSSNFDKDVV
A0A5A7SQ25 Ribosome biogenesis protein BRX1-like protein5.3e-1757.43Show/hide
Query:  RSGRLMKAKRVNKNENALFCGPKQKERISMAKGCSFSKNRCNECN----GRIEAYRELSERFPSN------------------------LTFSSNFDKDV
        RSGRLMKAKRVNKNENALFCGPKQKERISMAKGCSFSKNRCNE N     R    + L+  F ++                        LTFSSNFDKDV
Subjt:  RSGRLMKAKRVNKNENALFCGPKQKERISMAKGCSFSKNRCNECN----GRIEAYRELSERFPSN------------------------LTFSSNFDKDV

Query:  V
        +
Subjt:  V
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCCGCTCTCTGCTGTACGCTGCACTGCTGTACGCCCTCTTTCTCCTCCAAATGAAAGCGTCCTTCAAACAGTCCTACCAGACAAAAACGAAAAGCTACAGGACAA
AACGAGAAGCGGTCGCTTGATGAAAGCGAAAAGGGTGAATAAAAATGAAAACGCTTTGTTCTGTGGTCCTAAACAAAAAGAAAGAATTTCAATGGCAAAGGGTTGTTCTT
TTTCTAAGAATAGGTGCAATGAGTGCAATGGAAGAATTGAAGCTTATAGGGAACTATCTGAAAGGTTCCCGTCCAATTTGACATTTTCATCGAATTTTGATAAAGATGTT
GTTGCTTCAAGAATTATTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGCCGCTCTCTGCTGTACGCTGCACTGCTGTACGCCCTCTTTCTCCTCCAAATGAAAGCGTCCTTCAAACAGTCCTACCAGACAAAAACGAAAAGCTACAGGACAA
AACGAGAAGCGGTCGCTTGATGAAAGCGAAAAGGGTGAATAAAAATGAAAACGCTTTGTTCTGTGGTCCTAAACAAAAAGAAAGAATTTCAATGGCAAAGGGTTGTTCTT
TTTCTAAGAATAGGTGCAATGAGTGCAATGGAAGAATTGAAGCTTATAGGGAACTATCTGAAAGGTTCCCGTCCAATTTGACATTTTCATCGAATTTTGATAAAGATGTT
GTTGCTTCAAGAATTATTTGGTGA
Protein sequenceShow/hide protein sequence
MPPLSAVRCTAVRPLSPPNESVLQTVLPDKNEKLQDKTRSGRLMKAKRVNKNENALFCGPKQKERISMAKGCSFSKNRCNECNGRIEAYRELSERFPSNLTFSSNFDKDV
VASRIIW