| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0043391.1 pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 80.41 | Show/hide |
Query: MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMREQQKPASPTPA APAPAPAP PAPAPAPVPVAPQFVPDQLS
Subjt: MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
Query: AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Subjt: AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Query: RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
RQEFLN+EQG+MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKAEQQP
Subjt: RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Query: VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
VPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTG AQNQGAGAPHQGRVFATN+TEAEKAGTV
Subjt: VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
Query: VT------------------------------------------------------------------GHVIEVTLIVLDMLDFDVILGMDWLAANHASI
VT GHVIEVTLIVLDMLDFDVILGMDWLAANHASI
Subjt: VT------------------------------------------------------------------GHVIEVTLIVLDMLDFDVILGMDWLAANHASI
Query: DCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG--------------------
DCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG
Subjt: DCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG--------------------
Query: -----------------------------------------------------------------------IDDLFDQLQGATVFSKIDLRSGYHQLRIK
IDDLFDQLQGATVFSKIDLRSGYHQLRIK
Subjt: -----------------------------------------------------------------------IDDLFDQLQGATVFSKIDLRSGYHQLRIK
Query: DEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGH
DEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGH
Subjt: DEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGH
Query: VVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLNR
VVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYY RFVENFS IATPLTQLTRKGAPFVWSKACEDSFQ L +
Subjt: VVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLNR
|
|
| KAA0046014.1 gag protease polyprotein [Cucumis melo var. makuwa] | 0.0e+00 | 80.41 | Show/hide |
Query: MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKP SPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
Subjt: MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
Query: AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
AEAKHLRDFRKYNPTTFD SLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCA+FMLT+RGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Subjt: AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Query: RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
RQEFLNLEQGD+TVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRP THADALRL VDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Subjt: RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Query: VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHL RCLFGTRTCFKCRQEGHTAD+CPLR+TGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
Subjt: VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
Query: VT------------------------------------------------------------------GHVIEVTLIVLDMLDFDVILGMDWLAANHASI
VT GHVIEVTLIVLDMLDFDVILGMDWLAANHASI
Subjt: VT------------------------------------------------------------------GHVIEVTLIVLDMLDFDVILGMDWLAANHASI
Query: DCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG--------------------
DCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG
Subjt: DCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG--------------------
Query: -----------------------------------------------------------------------IDDLFDQLQGATVFSKIDLRSGYHQLRIK
IDDLFDQLQGATVFSKIDLRSGYHQLRIK
Subjt: -----------------------------------------------------------------------IDDLFDQLQGATVFSKIDLRSGYHQLRIK
Query: DEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGH
DEDVPKT FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGH
Subjt: DEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGH
Query: VVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLNR
VVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTL +
Subjt: VVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLNR
|
|
| KAA0048687.1 pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 82.73 | Show/hide |
Query: MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMREQQKPASPTPAPAPAPAPAP PAPA APVPVAPQFVPDQLS
Subjt: MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
Query: AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Subjt: AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Query: RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKAEQQP
Subjt: RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Query: VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
VPVPQRNFR GGEFR FQQKPFEAGEAAR KPLCT CGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTG AQNQGAGAPHQGRVFATN+TEAEKAGTV
Subjt: VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
Query: VT---------------------------------------GHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSL
VT GHVIEVTL+VLDMLDFDVILGMDWLAA+HASIDCSRKEVTFNPPS ASFKFKGGGS+SL
Subjt: VT---------------------------------------GHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSL
Query: PQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG-----------------------------------------------
PQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG
Subjt: PQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG-----------------------------------------------
Query: --------------------------------------------IDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTN
IDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTN
Subjt: --------------------------------------------IDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTN
Query: APAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVS
APAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVS
Subjt: APAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVS
Query: EVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLNR
EVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ L +
Subjt: EVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLNR
|
|
| KAA0066456.1 pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 83.49 | Show/hide |
Query: MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKP SP PAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
Subjt: MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
Query: AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Subjt: AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Query: RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATH DALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Subjt: RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Query: VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
VPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGT+
Subjt: VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
Query: VT------------------------------------------------------------------GHVIEVTLIVLDMLDFDVILGMDWLAANHASI
VT GHVIEVTLIVLDMLDFDVILGMDWLAANHASI
Subjt: VT------------------------------------------------------------------GHVIEVTLIVLDMLDFDVILGMDWLAANHASI
Query: DCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG--------------------
DCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG
Subjt: DCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG--------------------
Query: -----------------------------------------IDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPA
IDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKT FRSRYGHYEFIVMSFGLTNAPA
Subjt: -----------------------------------------IDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPA
Query: VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR
VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRD KLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR
Subjt: VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR
Query: SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLNR
SFLGL GYYRRFVENFSRIATPLTQLTRKG PFVWSKACEDSFQ L +
Subjt: SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLNR
|
|
| TYK01613.1 pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 81.89 | Show/hide |
Query: MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
Subjt: MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
Query: AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Subjt: AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Query: RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Subjt: RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Query: VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
Subjt: VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
Query: VT------------------------------------------------------------------GHVIEVTLIVLDMLDFDVILGMDWLAANHASI
VT GHVIEVTLIVLDMLDFDVILGMDWLAANHASI
Subjt: VT------------------------------------------------------------------GHVIEVTLIVLDMLDFDVILGMDWLAANHASI
Query: DCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG--------------------
DCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG
Subjt: DCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG--------------------
Query: -----------------------------------------------------------------------IDDLFDQLQGATVFSKIDLRSGYHQLRIK
IDDLFDQLQGATVFSKIDLRSGYHQLRIK
Subjt: -----------------------------------------------------------------------IDDLFDQLQGATVFSKIDLRSGYHQLRIK
Query: DEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGH
DEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGH
Subjt: DEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGH
Query: VVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLNR
VVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTL +
Subjt: VVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLNR
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TSI1 Gag protease polyprotein | 0.0e+00 | 80.41 | Show/hide |
Query: MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKP SPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
Subjt: MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
Query: AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
AEAKHLRDFRKYNPTTFD SLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCA+FMLT+RGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Subjt: AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Query: RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
RQEFLNLEQGD+TVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRP THADALRL VDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Subjt: RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Query: VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHL RCLFGTRTCFKCRQEGHTAD+CPLR+TGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
Subjt: VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
Query: VT------------------------------------------------------------------GHVIEVTLIVLDMLDFDVILGMDWLAANHASI
VT GHVIEVTLIVLDMLDFDVILGMDWLAANHASI
Subjt: VT------------------------------------------------------------------GHVIEVTLIVLDMLDFDVILGMDWLAANHASI
Query: DCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG--------------------
DCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG
Subjt: DCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG--------------------
Query: -----------------------------------------------------------------------IDDLFDQLQGATVFSKIDLRSGYHQLRIK
IDDLFDQLQGATVFSKIDLRSGYHQLRIK
Subjt: -----------------------------------------------------------------------IDDLFDQLQGATVFSKIDLRSGYHQLRIK
Query: DEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGH
DEDVPKT FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGH
Subjt: DEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGH
Query: VVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLNR
VVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTL +
Subjt: VVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLNR
|
|
| A0A5A7U330 Reverse transcriptase | 0.0e+00 | 82.73 | Show/hide |
Query: MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMREQQKPASPTPAPAPAPAPAP PAPA APVPVAPQFVPDQLS
Subjt: MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
Query: AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Subjt: AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Query: RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKAEQQP
Subjt: RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Query: VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
VPVPQRNFR GGEFR FQQKPFEAGEAAR KPLCT CGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTG AQNQGAGAPHQGRVFATN+TEAEKAGTV
Subjt: VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
Query: VT---------------------------------------GHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSL
VT GHVIEVTL+VLDMLDFDVILGMDWLAA+HASIDCSRKEVTFNPPS ASFKFKGGGS+SL
Subjt: VT---------------------------------------GHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSL
Query: PQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG-----------------------------------------------
PQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG
Subjt: PQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG-----------------------------------------------
Query: --------------------------------------------IDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTN
IDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTN
Subjt: --------------------------------------------IDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTN
Query: APAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVS
APAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVS
Subjt: APAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVS
Query: EVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLNR
EVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ L +
Subjt: EVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLNR
|
|
| A0A5A7UDB1 Reverse transcriptase | 0.0e+00 | 82.72 | Show/hide |
Query: MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRF+D+IMQMREQQKPASP PAPAPAPAP P PAPAPAPVPVAPQ VPDQLS
Subjt: MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
Query: AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
AEAKHLRDFRKYNPTTFDGSLEDPTRAQ+WLSSLETIFRYMKCPED KVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Subjt: AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Query: RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGL LDIQGLVRAFRP THADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Subjt: RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Query: VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
VPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTG A NQGAGAPHQGRVFATN+TEAEKAGTV
Subjt: VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
Query: VT---------------------------------GHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISA
VT GHVIEVTL+VLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISA
Subjt: VT---------------------------------GHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISA
Query: IRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG-----------------------------------------------------
I+ASKLLSQGTWGILASVVDTREADVSLSSEPVVRDY DVFPEELPG
Subjt: IRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG-----------------------------------------------------
Query: --------------------------------------IDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFM
IDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFM
Subjt: --------------------------------------IDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFM
Query: DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL
DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL
Subjt: DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL
Query: GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLNR
GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ L +
Subjt: GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLNR
|
|
| A0A5A7VJE2 Reverse transcriptase | 0.0e+00 | 83.49 | Show/hide |
Query: MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKP SP PAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
Subjt: MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
Query: AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Subjt: AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Query: RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATH DALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Subjt: RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Query: VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
VPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGT+
Subjt: VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
Query: VT------------------------------------------------------------------GHVIEVTLIVLDMLDFDVILGMDWLAANHASI
VT GHVIEVTLIVLDMLDFDVILGMDWLAANHASI
Subjt: VT------------------------------------------------------------------GHVIEVTLIVLDMLDFDVILGMDWLAANHASI
Query: DCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG--------------------
DCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG
Subjt: DCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG--------------------
Query: -----------------------------------------IDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPA
IDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKT FRSRYGHYEFIVMSFGLTNAPA
Subjt: -----------------------------------------IDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPA
Query: VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR
VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRD KLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR
Subjt: VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR
Query: SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLNR
SFLGL GYYRRFVENFSRIATPLTQLTRKG PFVWSKACEDSFQ L +
Subjt: SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLNR
|
|
| A0A5D3BPI1 Reverse transcriptase | 0.0e+00 | 81.89 | Show/hide |
Query: MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
Subjt: MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLS
Query: AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Subjt: AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Query: RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Subjt: RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Query: VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
Subjt: VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTV
Query: VT------------------------------------------------------------------GHVIEVTLIVLDMLDFDVILGMDWLAANHASI
VT GHVIEVTLIVLDMLDFDVILGMDWLAANHASI
Subjt: VT------------------------------------------------------------------GHVIEVTLIVLDMLDFDVILGMDWLAANHASI
Query: DCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG--------------------
DCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG
Subjt: DCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPG--------------------
Query: -----------------------------------------------------------------------IDDLFDQLQGATVFSKIDLRSGYHQLRIK
IDDLFDQLQGATVFSKIDLRSGYHQLRIK
Subjt: -----------------------------------------------------------------------IDDLFDQLQGATVFSKIDLRSGYHQLRIK
Query: DEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGH
DEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGH
Subjt: DEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGH
Query: VVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLNR
VVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTL +
Subjt: VVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLNR
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 6.4e-41 | 40.31 | Show/hide |
Query: LPGIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
+P +D++ +L F+ IDL G+HQ+ + E V KTAF +++GHYE++ M FGL NAPA F MN + R L+ +V++DDI+++S + EH +
Subjt: LPGIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Query: LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRK
L +V + L L + KCEF ++ +FLGHV++ G+ +P KIEA+ + P+ E+++FLGL GYYR+F+ NF+ IA P+T+ +K
Subjt: LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRK
|
|
| P0CT34 Transposon Tf2-1 polyprotein | 3.5e-39 | 35.94 | Show/hide |
Query: PDVFPEELPGIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKT
P+++P LP I+ L ++QG+T+F+K+DL+S YH +R++ D K AFR G +E++VM +G++ APA F +N + E ++ V+ ++DDILI+SK+
Subjt: PDVFPEELPGIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKT
Query: EAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGA
E+EH +H++ VLQ L++ L +KCEF QV F+G+ +S+ G + I+ V W +P E+R FLG Y R+F+ S++ PL L +K
Subjt: EAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGA
Query: PFVWSKACEDSFQTLNR
+ W+ + + + +
Subjt: PFVWSKACEDSFQTLNR
|
|
| P0CT41 Transposon Tf2-12 polyprotein | 3.5e-39 | 35.94 | Show/hide |
Query: PDVFPEELPGIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKT
P+++P LP I+ L ++QG+T+F+K+DL+S YH +R++ D K AFR G +E++VM +G++ APA F +N + E ++ V+ ++DDILI+SK+
Subjt: PDVFPEELPGIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKT
Query: EAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGA
E+EH +H++ VLQ L++ L +KCEF QV F+G+ +S+ G + I+ V W +P E+R FLG Y R+F+ S++ PL L +K
Subjt: EAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGA
Query: PFVWSKACEDSFQTLNR
+ W+ + + + +
Subjt: PFVWSKACEDSFQTLNR
|
|
| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 2.0e-42 | 39.9 | Show/hide |
Query: PDVFPEELPGIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKT
PD +P +P +D++ +L F+ IDL G+HQ+ + +E + KTAF ++ GHYE++ M FGL NAPA F MN + R L+ +V++DDI+I+S +
Subjt: PDVFPEELPGIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKT
Query: EAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRK
EH +++V L D L + KCEF K+ +FLGH+V+ G+ +P K++A+ + P+ E+R+FLGL GYYR+F+ N++ IA P+T +K
Subjt: EAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRK
|
|
| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 1.8e-40 | 39.59 | Show/hide |
Query: PDVFPEELPGIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKT
PD +P +P I+ L A F+ +DL SG+HQ+ +K+ D+PKTAF + G YEF+ + FGL NAPA+F +++ + RE + V+IDDI+++S+
Subjt: PDVFPEELPGIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKT
Query: EAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTR
H ++LR+VL +L L K F QV FLG++V+ G+ DP K+ A++ P++V E++ FLG+ YYR+F+++++++A PLT LTR
Subjt: EAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTR
|
|
