; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0014023 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0014023
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase
Genome locationchr03:16704590..16706209
RNA-Seq ExpressionPay0014023
SyntenyPay0014023
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR005162 - Retrotransposon gag domain
IPR021109 - Aspartic peptidase domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031931.1 pol protein [Cucumis melo var. makuwa]4.3e-23278.43Show/hide
Query:  MEQRFRDLIMQMQKQHQPAPPVPAPA------------LVVPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTKAQMWLSSLENIFRYMK--------
        MEQRFRDLIMQM++Q QP PP PAPA             V PQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPT+AQ+WLSSLE IFRYMK        
Subjt:  MEQRFRDLIMQMQKQHQPAPPVPAPA------------LVVPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTKAQMWLSSLENIFRYMK--------

Query:  -------------------MLGGDVGQITWEQFKESFYEKFFSASLRDAKQQEFLNLEQGDRTVEQYDAEFDMLSRFAPEMIATEAARAN----------
                           MLGGDV QITW+QFKESFY KFFSASLRDAK+QEFLNLEQGD TVEQYDAEFDMLSRFAPEMIATEAARA+          
Subjt:  -------------------MLGGDVGQITWEQFKESFYEKFFSASLRDAKQQEFLNLEQGDRTVEQYDAEFDMLSRFAPEMIATEAARAN----------

Query:  ----------------------NLQERANSSKVAGRGSTSGQKRKAEQQPISVPQWNFRPGGEFHRFQQRPFEAREVARGKPLCTTCGKHYLGRCLFGTR
                              +LQERANSSK AGRGSTSGQKRKAEQQP+ VPQ NFR GGEF RFQQ+PFEA E ARGKPLCTTCGKH+LGRCLFGTR
Subjt:  ----------------------NLQERANSSKVAGRGSTSGQKRKAEQQPISVPQWNFRPGGEFHRFQQRPFEAREVARGKPLCTTCGKHYLGRCLFGTR

Query:  TCFKCRKEGHTADRCPMRLTGGTQNQGAGAPHQSKVFATNKTEAERAGTVVIGTLPVLGHYALVLFDSSSSHSFISSAFVLHARLEVEPLHHVLSVSTPS
        TCFKCR+EGHTADRCP+RLTG  QNQGAGAPHQ +VFATNKTEAERAGTVV GTLPVLGHYALVLFDS SSHSFISSAFVLHARLEVEPLHHVLSVSTPS
Subjt:  TCFKCRKEGHTADRCPMRLTGGTQNQGAGAPHQSKVFATNKTEAERAGTVVIGTLPVLGHYALVLFDSSSSHSFISSAFVLHARLEVEPLHHVLSVSTPS

Query:  GENMLLKEKVKACQIEIAGHVIEVTLLVLDMLDFNVILGMDWLAANHASIDCSRKEVAFNPPLMASFKFKGEGSRSLPKVISAMRASKLLSQGTWSILAS
        GE ML KEKVKACQIEIAGHVIEVTLLVLDMLDF+VILGMDWLAANHASIDCSRKEV FNPP MASFKFKG GSRSLP+VISA+RASKLLSQGTW ILAS
Subjt:  GENMLLKEKVKACQIEIAGHVIEVTLLVLDMLDFNVILGMDWLAANHASIDCSRKEVAFNPPLMASFKFKGEGSRSLPKVISAMRASKLLSQGTWSILAS

Query:  VMDTREVDVSLSSEPVVRDYPDVFLEELPGLPPHREIEFAIELEPGT
        V+DTREVDVSLSSEPVVRDYPDVF EELPGLPPHRE+EFAIELEPGT
Subjt:  VMDTREVDVSLSSEPVVRDYPDVFLEELPGLPPHREIEFAIELEPGT

KAA0036666.1 pol protein [Cucumis melo var. makuwa]1.7e-23178.82Show/hide
Query:  MEQRFRDLIMQMQKQHQPAPPVPAPA--------LVVPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTKAQMWLSSLENIFRYMK------------
        MEQRFRDLIMQM++Q QPAPP PAPA         V P+VVPDQLS EAKHLRDFRKYNPTTFDGSLEDPT+AQ+WLSSLE IFRYMK            
Subjt:  MEQRFRDLIMQMQKQHQPAPPVPAPA--------LVVPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTKAQMWLSSLENIFRYMK------------

Query:  ---------------MLGGDVGQITWEQFKESFYEKFFSASLRDAKQQEFLNLEQGDRTVEQYDAEFDMLSRFAPEMIATEAARAN--------------
                       MLGGDV QITW+QFKESFY KFFS SLRDAK+QEFLNLEQGD TVEQYDAEFDMLS FAPEMIATEAARA+              
Subjt:  ---------------MLGGDVGQITWEQFKESFYEKFFSASLRDAKQQEFLNLEQGDRTVEQYDAEFDMLSRFAPEMIATEAARAN--------------

Query:  ------------------NLQERANSSKVAGRGSTSGQKRKAEQQPISVPQWNFRPGGEFHRFQQRPFEAREVARGKPLCTTCGKHYLGRCLFGTRTCFK
                          +LQERANSSKVAGRGSTSGQKRKAEQQPI VPQ NFRPGGEF RFQQ+PFEA E ARGKPLC TCGKH+LGRCLFGTRTCFK
Subjt:  ------------------NLQERANSSKVAGRGSTSGQKRKAEQQPISVPQWNFRPGGEFHRFQQRPFEAREVARGKPLCTTCGKHYLGRCLFGTRTCFK

Query:  CRKEGHTADRCPMRLTGGTQNQGAGAPHQSKVFATNKTEAERAGTVVIGTLPVLGHYALVLFDSSSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGENM
        CR+EGHTADRCPMRLTG  QNQGAGAPHQ +VFATNKTEAERAGTVV GTLPVLGHYALVLFDS SSHSFISSAFVLHARLEVEPLHHVLSVSTPS E M
Subjt:  CRKEGHTADRCPMRLTGGTQNQGAGAPHQSKVFATNKTEAERAGTVVIGTLPVLGHYALVLFDSSSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGENM

Query:  LLKEKVKACQIEIAGHVIEVTLLVLDMLDFNVILGMDWLAANHASIDCSRKEVAFNPPLMASFKFKGEGSRSLPKVISAMRASKLLSQGTWSILASVMDT
        L KEKVKACQIEIAGHVIEVTLLVLDMLDF+V+LGMDWLAANHASIDCS KEVAFNPP MASFKFKGEGSRSLP+VISA+RASKLLSQGTW ILASV+DT
Subjt:  LLKEKVKACQIEIAGHVIEVTLLVLDMLDFNVILGMDWLAANHASIDCSRKEVAFNPPLMASFKFKGEGSRSLPKVISAMRASKLLSQGTWSILASVMDT

Query:  REVDVSLSSEPVVRDYPDVFLEELPGLPPHREIEFAIELEPGT
        REVDVSLSSEPVVRDYPDVF EELPGLPPHRE+EFAIELEPGT
Subjt:  REVDVSLSSEPVVRDYPDVFLEELPGLPPHREIEFAIELEPGT

KAA0040871.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.9e-23382.52Show/hide
Query:  MEQRFRDLIMQMQKQHQPAPPVPAPAL------------VVPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTKAQMWLSSLENIFRYMK--------
        MEQRFRDLIMQM++Q Q APP PAPA             V PQVV DQLS EAKHLRDFRKYNPTTFDGSLEDPT+AQ+WLSSLE IFRYMK        
Subjt:  MEQRFRDLIMQMQKQHQPAPPVPAPAL------------VVPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTKAQMWLSSLENIFRYMK--------

Query:  -------------------MLGGDVGQITWEQFKESFYEKFFSASLRDAKQQEFLNLEQGDRTVEQYDAEFDMLSRFAPEMIATEAARANNLQERANSSK
                           MLGGDV QITW+QFKESFY KFFSASLRDAK+QEFLNLEQGD TVEQYDAEFDMLSRFAPEMIATEAARANNLQE  NSSK
Subjt:  -------------------MLGGDVGQITWEQFKESFYEKFFSASLRDAKQQEFLNLEQGDRTVEQYDAEFDMLSRFAPEMIATEAARANNLQERANSSK

Query:  VAGRGSTSGQKRKAEQQPISVPQWNFRPGGEFHRFQQRPFEAREVARGKPLCTTCGKHYLGRCLFGTRTCFKCRKEGHTADRCPMRLTGGTQNQGAGAPH
         AGRGSTSGQKRKAEQQ + VPQ NFR GGEF RFQQ+PFEA E ARGK LCTTCGKH+LGRCLFGTRTCFKCR+EGHTADRCP+RLTG  QNQGAGAPH
Subjt:  VAGRGSTSGQKRKAEQQPISVPQWNFRPGGEFHRFQQRPFEAREVARGKPLCTTCGKHYLGRCLFGTRTCFKCRKEGHTADRCPMRLTGGTQNQGAGAPH

Query:  QSKVFATNKTEAERAGTVVIGTLPVLGHYALVLFDSSSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGENMLLKEKVKACQIEIAGHVIEVTLLVLDML
        Q +VFATNKTEAERAGTVV GTLPVLGHYALVLFDS SSHSFISSAFVLHARLEVEPLHHVLSVSTPSGE ML KEKVKACQIEIAGHVIEVTLLVLDML
Subjt:  QSKVFATNKTEAERAGTVVIGTLPVLGHYALVLFDSSSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGENMLLKEKVKACQIEIAGHVIEVTLLVLDML

Query:  DFNVILGMDWLAANHASIDCSRKEVAFNPPLMASFKFKGEGSRSLPKVISAMRASKLLSQGTWSILASVMDTREVDVSLSSEPVVRDYPDVFLEELPGLP
        DF+VILGMDWLAANHASIDCSRKEV FNP  MASFKFKGEGSRSLP+VISA+RASKLLSQGTW ILASV+DTREVDVSLSSEPVVRDYPDVF EELPGLP
Subjt:  DFNVILGMDWLAANHASIDCSRKEVAFNPPLMASFKFKGEGSRSLPKVISAMRASKLLSQGTWSILASVMDTREVDVSLSSEPVVRDYPDVFLEELPGLP

Query:  PHREIEFAIELEPGT
        PHRE+EFAIELEPGT
Subjt:  PHREIEFAIELEPGT

KAA0047038.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.3e-23178.82Show/hide
Query:  MEQRFRDLIMQMQKQHQPAPPVPAPA--------LVVPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTKAQMWLSSLENIFRYMK------------
        MEQRFR LIMQM++Q QPAPP PAPA         V PQVVPDQLSAEAKHLRDFRKYNPTTF+GSLEDPT+AQ+WLSSLE IFRYMK            
Subjt:  MEQRFRDLIMQMQKQHQPAPPVPAPA--------LVVPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTKAQMWLSSLENIFRYMK------------

Query:  ---------------MLGGDVGQITWEQFKESFYEKFFSASLRDAKQQEFLNLEQGDRTVEQYDAEFDMLSRFAPEMIATEAARAN--------------
                       MLGGDV QITW+QFKESFY KFFSASLRDAK+QEFLNLEQGD TVEQYDAEFDMLSRFAPEMIATEAARA+              
Subjt:  ---------------MLGGDVGQITWEQFKESFYEKFFSASLRDAKQQEFLNLEQGDRTVEQYDAEFDMLSRFAPEMIATEAARAN--------------

Query:  ------------------NLQERANSSKVAGRGSTSGQKRKAEQQPISVPQWNFRPGGEFHRFQQRPFEAREVARGKPLCTTCGKHYLGRCLFGTRTCFK
                          +LQERANSSK AGRGSTSGQKRKAEQQP+ VPQ NFR GGEF RFQQ+PFEA E ARGKPLCTTCGKH+LGRCLFGTRTCFK
Subjt:  ------------------NLQERANSSKVAGRGSTSGQKRKAEQQPISVPQWNFRPGGEFHRFQQRPFEAREVARGKPLCTTCGKHYLGRCLFGTRTCFK

Query:  CRKEGHTADRCPMRLTGGTQNQGAGAPHQSKVFATNKTEAERAGTVVIGTLPVLGHYALVLFDSSSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGENM
        CR+EGHTADRCP+RLTG  QNQGAGAPHQ +VFATNKTEAERAGTVV GTLPVLGHYALVLFDS SSHSFISSAFVLHARLEVEPLHHVLSVSTPSGE M
Subjt:  CRKEGHTADRCPMRLTGGTQNQGAGAPHQSKVFATNKTEAERAGTVVIGTLPVLGHYALVLFDSSSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGENM

Query:  LLKEKVKACQIEIAGHVIEVTLLVLDMLDFNVILGMDWLAANHASIDCSRKEVAFNPPLMASFKFKGEGSRSLPKVISAMRASKLLSQGTWSILASVMDT
        L KEKVKACQIEIAGHVIEVTLLVLDMLDF+VILGMDWLAANHASIDCSRKEV FNPP MASFKFKG GSRSLP+VISA+RASKLLSQGTW ILASV+DT
Subjt:  LLKEKVKACQIEIAGHVIEVTLLVLDMLDFNVILGMDWLAANHASIDCSRKEVAFNPPLMASFKFKGEGSRSLPKVISAMRASKLLSQGTWSILASVMDT

Query:  REVDVSLSSEPVVRDYPDVFLEELPGLPPHREIEFAIELEPGT
        REVDVSLSSEPVVRDYPDVF EELPGLPPHRE+EFAIELEPGT
Subjt:  REVDVSLSSEPVVRDYPDVFLEELPGLPPHREIEFAIELEPGT

KAA0056464.1 gag protease polyprotein [Cucumis melo var. makuwa]3.6e-23482.52Show/hide
Query:  MEQRFRDLIMQMQKQHQPAPPVPAPA------------LVVPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTKAQMWLSSLENIFRYMK--------
        MEQRFRDLIMQM++Q QPAPP PAPA             V PQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPT+AQ+WL SLE IFRYMK        
Subjt:  MEQRFRDLIMQMQKQHQPAPPVPAPA------------LVVPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTKAQMWLSSLENIFRYMK--------

Query:  -------------------MLGGDVGQITWEQFKESFYEKFFSASLRDAKQQEFLNLEQGDRTVEQYDAEFDMLSRFAPEMIATEAARANNLQERANSSK
                           MLGGDV QITW+QFKESFY KFFSASLRDAK+QEFLNLEQGD TVEQYDAEFDMLSRFAPEMIATEAARA+NLQERANSSK
Subjt:  -------------------MLGGDVGQITWEQFKESFYEKFFSASLRDAKQQEFLNLEQGDRTVEQYDAEFDMLSRFAPEMIATEAARANNLQERANSSK

Query:  VAGRGSTSGQKRKAEQQPISVPQWNFRPGGEFHRFQQRPFEAREVARGKPLCTTCGKHYLGRCLFGTRTCFKCRKEGHTADRCPMRLTGGTQNQGAGAPH
         AGRGSTSGQKRKAEQQP+ VPQ NFR GGEF RFQQ+PFEA E ARGK  CTTCGKH+LGRCLFGT+TCFKCR+EGHTADRCP+RLT   QNQGAGAPH
Subjt:  VAGRGSTSGQKRKAEQQPISVPQWNFRPGGEFHRFQQRPFEAREVARGKPLCTTCGKHYLGRCLFGTRTCFKCRKEGHTADRCPMRLTGGTQNQGAGAPH

Query:  QSKVFATNKTEAERAGTVVIGTLPVLGHYALVLFDSSSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGENMLLKEKVKACQIEIAGHVIEVTLLVLDML
        Q +VFATNKTEAERAGTVV GTLPVLGHYALVLFDS SSHSFISSAF+LHARLEVEPLHHVLSVSTPSGE ML KEKVKACQIEIAGHVIEVTLLVLDML
Subjt:  QSKVFATNKTEAERAGTVVIGTLPVLGHYALVLFDSSSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGENMLLKEKVKACQIEIAGHVIEVTLLVLDML

Query:  DFNVILGMDWLAANHASIDCSRKEVAFNPPLMASFKFKGEGSRSLPKVISAMRASKLLSQGTWSILASVMDTREVDVSLSSEPVVRDYPDVFLEELPGLP
        DF+VILGMDWLAANHASIDCSRKEV FNPP MASFKFKG GSRSLP+VISA+RASKLLSQGTW ILASV+DTREVDVSLSSEPVVRDYPDVF EELPGLP
Subjt:  DFNVILGMDWLAANHASIDCSRKEVAFNPPLMASFKFKGEGSRSLPKVISAMRASKLLSQGTWSILASVMDTREVDVSLSSEPVVRDYPDVFLEELPGLP

Query:  PHREIEFAIELEPGT
        PHRE+EFAIELEPGT
Subjt:  PHREIEFAIELEPGT

TrEMBL top hitse value%identityAlignment
A0A5A7SQU8 Reverse transcriptase2.1e-23278.43Show/hide
Query:  MEQRFRDLIMQMQKQHQPAPPVPAPA------------LVVPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTKAQMWLSSLENIFRYMK--------
        MEQRFRDLIMQM++Q QP PP PAPA             V PQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPT+AQ+WLSSLE IFRYMK        
Subjt:  MEQRFRDLIMQMQKQHQPAPPVPAPA------------LVVPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTKAQMWLSSLENIFRYMK--------

Query:  -------------------MLGGDVGQITWEQFKESFYEKFFSASLRDAKQQEFLNLEQGDRTVEQYDAEFDMLSRFAPEMIATEAARAN----------
                           MLGGDV QITW+QFKESFY KFFSASLRDAK+QEFLNLEQGD TVEQYDAEFDMLSRFAPEMIATEAARA+          
Subjt:  -------------------MLGGDVGQITWEQFKESFYEKFFSASLRDAKQQEFLNLEQGDRTVEQYDAEFDMLSRFAPEMIATEAARAN----------

Query:  ----------------------NLQERANSSKVAGRGSTSGQKRKAEQQPISVPQWNFRPGGEFHRFQQRPFEAREVARGKPLCTTCGKHYLGRCLFGTR
                              +LQERANSSK AGRGSTSGQKRKAEQQP+ VPQ NFR GGEF RFQQ+PFEA E ARGKPLCTTCGKH+LGRCLFGTR
Subjt:  ----------------------NLQERANSSKVAGRGSTSGQKRKAEQQPISVPQWNFRPGGEFHRFQQRPFEAREVARGKPLCTTCGKHYLGRCLFGTR

Query:  TCFKCRKEGHTADRCPMRLTGGTQNQGAGAPHQSKVFATNKTEAERAGTVVIGTLPVLGHYALVLFDSSSSHSFISSAFVLHARLEVEPLHHVLSVSTPS
        TCFKCR+EGHTADRCP+RLTG  QNQGAGAPHQ +VFATNKTEAERAGTVV GTLPVLGHYALVLFDS SSHSFISSAFVLHARLEVEPLHHVLSVSTPS
Subjt:  TCFKCRKEGHTADRCPMRLTGGTQNQGAGAPHQSKVFATNKTEAERAGTVVIGTLPVLGHYALVLFDSSSSHSFISSAFVLHARLEVEPLHHVLSVSTPS

Query:  GENMLLKEKVKACQIEIAGHVIEVTLLVLDMLDFNVILGMDWLAANHASIDCSRKEVAFNPPLMASFKFKGEGSRSLPKVISAMRASKLLSQGTWSILAS
        GE ML KEKVKACQIEIAGHVIEVTLLVLDMLDF+VILGMDWLAANHASIDCSRKEV FNPP MASFKFKG GSRSLP+VISA+RASKLLSQGTW ILAS
Subjt:  GENMLLKEKVKACQIEIAGHVIEVTLLVLDMLDFNVILGMDWLAANHASIDCSRKEVAFNPPLMASFKFKGEGSRSLPKVISAMRASKLLSQGTWSILAS

Query:  VMDTREVDVSLSSEPVVRDYPDVFLEELPGLPPHREIEFAIELEPGT
        V+DTREVDVSLSSEPVVRDYPDVF EELPGLPPHRE+EFAIELEPGT
Subjt:  VMDTREVDVSLSSEPVVRDYPDVFLEELPGLPPHREIEFAIELEPGT

A0A5A7T3J6 Reverse transcriptase8.0e-23278.82Show/hide
Query:  MEQRFRDLIMQMQKQHQPAPPVPAPA--------LVVPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTKAQMWLSSLENIFRYMK------------
        MEQRFRDLIMQM++Q QPAPP PAPA         V P+VVPDQLS EAKHLRDFRKYNPTTFDGSLEDPT+AQ+WLSSLE IFRYMK            
Subjt:  MEQRFRDLIMQMQKQHQPAPPVPAPA--------LVVPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTKAQMWLSSLENIFRYMK------------

Query:  ---------------MLGGDVGQITWEQFKESFYEKFFSASLRDAKQQEFLNLEQGDRTVEQYDAEFDMLSRFAPEMIATEAARAN--------------
                       MLGGDV QITW+QFKESFY KFFS SLRDAK+QEFLNLEQGD TVEQYDAEFDMLS FAPEMIATEAARA+              
Subjt:  ---------------MLGGDVGQITWEQFKESFYEKFFSASLRDAKQQEFLNLEQGDRTVEQYDAEFDMLSRFAPEMIATEAARAN--------------

Query:  ------------------NLQERANSSKVAGRGSTSGQKRKAEQQPISVPQWNFRPGGEFHRFQQRPFEAREVARGKPLCTTCGKHYLGRCLFGTRTCFK
                          +LQERANSSKVAGRGSTSGQKRKAEQQPI VPQ NFRPGGEF RFQQ+PFEA E ARGKPLC TCGKH+LGRCLFGTRTCFK
Subjt:  ------------------NLQERANSSKVAGRGSTSGQKRKAEQQPISVPQWNFRPGGEFHRFQQRPFEAREVARGKPLCTTCGKHYLGRCLFGTRTCFK

Query:  CRKEGHTADRCPMRLTGGTQNQGAGAPHQSKVFATNKTEAERAGTVVIGTLPVLGHYALVLFDSSSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGENM
        CR+EGHTADRCPMRLTG  QNQGAGAPHQ +VFATNKTEAERAGTVV GTLPVLGHYALVLFDS SSHSFISSAFVLHARLEVEPLHHVLSVSTPS E M
Subjt:  CRKEGHTADRCPMRLTGGTQNQGAGAPHQSKVFATNKTEAERAGTVVIGTLPVLGHYALVLFDSSSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGENM

Query:  LLKEKVKACQIEIAGHVIEVTLLVLDMLDFNVILGMDWLAANHASIDCSRKEVAFNPPLMASFKFKGEGSRSLPKVISAMRASKLLSQGTWSILASVMDT
        L KEKVKACQIEIAGHVIEVTLLVLDMLDF+V+LGMDWLAANHASIDCS KEVAFNPP MASFKFKGEGSRSLP+VISA+RASKLLSQGTW ILASV+DT
Subjt:  LLKEKVKACQIEIAGHVIEVTLLVLDMLDFNVILGMDWLAANHASIDCSRKEVAFNPPLMASFKFKGEGSRSLPKVISAMRASKLLSQGTWSILASVMDT

Query:  REVDVSLSSEPVVRDYPDVFLEELPGLPPHREIEFAIELEPGT
        REVDVSLSSEPVVRDYPDVF EELPGLPPHRE+EFAIELEPGT
Subjt:  REVDVSLSSEPVVRDYPDVFLEELPGLPPHREIEFAIELEPGT

A0A5A7TGS7 Reverse transcriptase1.9e-23382.52Show/hide
Query:  MEQRFRDLIMQMQKQHQPAPPVPAPAL------------VVPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTKAQMWLSSLENIFRYMK--------
        MEQRFRDLIMQM++Q Q APP PAPA             V PQVV DQLS EAKHLRDFRKYNPTTFDGSLEDPT+AQ+WLSSLE IFRYMK        
Subjt:  MEQRFRDLIMQMQKQHQPAPPVPAPAL------------VVPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTKAQMWLSSLENIFRYMK--------

Query:  -------------------MLGGDVGQITWEQFKESFYEKFFSASLRDAKQQEFLNLEQGDRTVEQYDAEFDMLSRFAPEMIATEAARANNLQERANSSK
                           MLGGDV QITW+QFKESFY KFFSASLRDAK+QEFLNLEQGD TVEQYDAEFDMLSRFAPEMIATEAARANNLQE  NSSK
Subjt:  -------------------MLGGDVGQITWEQFKESFYEKFFSASLRDAKQQEFLNLEQGDRTVEQYDAEFDMLSRFAPEMIATEAARANNLQERANSSK

Query:  VAGRGSTSGQKRKAEQQPISVPQWNFRPGGEFHRFQQRPFEAREVARGKPLCTTCGKHYLGRCLFGTRTCFKCRKEGHTADRCPMRLTGGTQNQGAGAPH
         AGRGSTSGQKRKAEQQ + VPQ NFR GGEF RFQQ+PFEA E ARGK LCTTCGKH+LGRCLFGTRTCFKCR+EGHTADRCP+RLTG  QNQGAGAPH
Subjt:  VAGRGSTSGQKRKAEQQPISVPQWNFRPGGEFHRFQQRPFEAREVARGKPLCTTCGKHYLGRCLFGTRTCFKCRKEGHTADRCPMRLTGGTQNQGAGAPH

Query:  QSKVFATNKTEAERAGTVVIGTLPVLGHYALVLFDSSSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGENMLLKEKVKACQIEIAGHVIEVTLLVLDML
        Q +VFATNKTEAERAGTVV GTLPVLGHYALVLFDS SSHSFISSAFVLHARLEVEPLHHVLSVSTPSGE ML KEKVKACQIEIAGHVIEVTLLVLDML
Subjt:  QSKVFATNKTEAERAGTVVIGTLPVLGHYALVLFDSSSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGENMLLKEKVKACQIEIAGHVIEVTLLVLDML

Query:  DFNVILGMDWLAANHASIDCSRKEVAFNPPLMASFKFKGEGSRSLPKVISAMRASKLLSQGTWSILASVMDTREVDVSLSSEPVVRDYPDVFLEELPGLP
        DF+VILGMDWLAANHASIDCSRKEV FNP  MASFKFKGEGSRSLP+VISA+RASKLLSQGTW ILASV+DTREVDVSLSSEPVVRDYPDVF EELPGLP
Subjt:  DFNVILGMDWLAANHASIDCSRKEVAFNPPLMASFKFKGEGSRSLPKVISAMRASKLLSQGTWSILASVMDTREVDVSLSSEPVVRDYPDVFLEELPGLP

Query:  PHREIEFAIELEPGT
        PHRE+EFAIELEPGT
Subjt:  PHREIEFAIELEPGT

A0A5A7TVX7 Reverse transcriptase6.1e-23278.82Show/hide
Query:  MEQRFRDLIMQMQKQHQPAPPVPAPA--------LVVPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTKAQMWLSSLENIFRYMK------------
        MEQRFR LIMQM++Q QPAPP PAPA         V PQVVPDQLSAEAKHLRDFRKYNPTTF+GSLEDPT+AQ+WLSSLE IFRYMK            
Subjt:  MEQRFRDLIMQMQKQHQPAPPVPAPA--------LVVPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTKAQMWLSSLENIFRYMK------------

Query:  ---------------MLGGDVGQITWEQFKESFYEKFFSASLRDAKQQEFLNLEQGDRTVEQYDAEFDMLSRFAPEMIATEAARAN--------------
                       MLGGDV QITW+QFKESFY KFFSASLRDAK+QEFLNLEQGD TVEQYDAEFDMLSRFAPEMIATEAARA+              
Subjt:  ---------------MLGGDVGQITWEQFKESFYEKFFSASLRDAKQQEFLNLEQGDRTVEQYDAEFDMLSRFAPEMIATEAARAN--------------

Query:  ------------------NLQERANSSKVAGRGSTSGQKRKAEQQPISVPQWNFRPGGEFHRFQQRPFEAREVARGKPLCTTCGKHYLGRCLFGTRTCFK
                          +LQERANSSK AGRGSTSGQKRKAEQQP+ VPQ NFR GGEF RFQQ+PFEA E ARGKPLCTTCGKH+LGRCLFGTRTCFK
Subjt:  ------------------NLQERANSSKVAGRGSTSGQKRKAEQQPISVPQWNFRPGGEFHRFQQRPFEAREVARGKPLCTTCGKHYLGRCLFGTRTCFK

Query:  CRKEGHTADRCPMRLTGGTQNQGAGAPHQSKVFATNKTEAERAGTVVIGTLPVLGHYALVLFDSSSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGENM
        CR+EGHTADRCP+RLTG  QNQGAGAPHQ +VFATNKTEAERAGTVV GTLPVLGHYALVLFDS SSHSFISSAFVLHARLEVEPLHHVLSVSTPSGE M
Subjt:  CRKEGHTADRCPMRLTGGTQNQGAGAPHQSKVFATNKTEAERAGTVVIGTLPVLGHYALVLFDSSSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGENM

Query:  LLKEKVKACQIEIAGHVIEVTLLVLDMLDFNVILGMDWLAANHASIDCSRKEVAFNPPLMASFKFKGEGSRSLPKVISAMRASKLLSQGTWSILASVMDT
        L KEKVKACQIEIAGHVIEVTLLVLDMLDF+VILGMDWLAANHASIDCSRKEV FNPP MASFKFKG GSRSLP+VISA+RASKLLSQGTW ILASV+DT
Subjt:  LLKEKVKACQIEIAGHVIEVTLLVLDMLDFNVILGMDWLAANHASIDCSRKEVAFNPPLMASFKFKGEGSRSLPKVISAMRASKLLSQGTWSILASVMDT

Query:  REVDVSLSSEPVVRDYPDVFLEELPGLPPHREIEFAIELEPGT
        REVDVSLSSEPVVRDYPDVF EELPGLPPHRE+EFAIELEPGT
Subjt:  REVDVSLSSEPVVRDYPDVFLEELPGLPPHREIEFAIELEPGT

A0A5A7UMP2 Gag protease polyprotein1.7e-23482.52Show/hide
Query:  MEQRFRDLIMQMQKQHQPAPPVPAPA------------LVVPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTKAQMWLSSLENIFRYMK--------
        MEQRFRDLIMQM++Q QPAPP PAPA             V PQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPT+AQ+WL SLE IFRYMK        
Subjt:  MEQRFRDLIMQMQKQHQPAPPVPAPA------------LVVPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTKAQMWLSSLENIFRYMK--------

Query:  -------------------MLGGDVGQITWEQFKESFYEKFFSASLRDAKQQEFLNLEQGDRTVEQYDAEFDMLSRFAPEMIATEAARANNLQERANSSK
                           MLGGDV QITW+QFKESFY KFFSASLRDAK+QEFLNLEQGD TVEQYDAEFDMLSRFAPEMIATEAARA+NLQERANSSK
Subjt:  -------------------MLGGDVGQITWEQFKESFYEKFFSASLRDAKQQEFLNLEQGDRTVEQYDAEFDMLSRFAPEMIATEAARANNLQERANSSK

Query:  VAGRGSTSGQKRKAEQQPISVPQWNFRPGGEFHRFQQRPFEAREVARGKPLCTTCGKHYLGRCLFGTRTCFKCRKEGHTADRCPMRLTGGTQNQGAGAPH
         AGRGSTSGQKRKAEQQP+ VPQ NFR GGEF RFQQ+PFEA E ARGK  CTTCGKH+LGRCLFGT+TCFKCR+EGHTADRCP+RLT   QNQGAGAPH
Subjt:  VAGRGSTSGQKRKAEQQPISVPQWNFRPGGEFHRFQQRPFEAREVARGKPLCTTCGKHYLGRCLFGTRTCFKCRKEGHTADRCPMRLTGGTQNQGAGAPH

Query:  QSKVFATNKTEAERAGTVVIGTLPVLGHYALVLFDSSSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGENMLLKEKVKACQIEIAGHVIEVTLLVLDML
        Q +VFATNKTEAERAGTVV GTLPVLGHYALVLFDS SSHSFISSAF+LHARLEVEPLHHVLSVSTPSGE ML KEKVKACQIEIAGHVIEVTLLVLDML
Subjt:  QSKVFATNKTEAERAGTVVIGTLPVLGHYALVLFDSSSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGENMLLKEKVKACQIEIAGHVIEVTLLVLDML

Query:  DFNVILGMDWLAANHASIDCSRKEVAFNPPLMASFKFKGEGSRSLPKVISAMRASKLLSQGTWSILASVMDTREVDVSLSSEPVVRDYPDVFLEELPGLP
        DF+VILGMDWLAANHASIDCSRKEV FNPP MASFKFKG GSRSLP+VISA+RASKLLSQGTW ILASV+DTREVDVSLSSEPVVRDYPDVF EELPGLP
Subjt:  DFNVILGMDWLAANHASIDCSRKEVAFNPPLMASFKFKGEGSRSLPKVISAMRASKLLSQGTWSILASVMDTREVDVSLSSEPVVRDYPDVFLEELPGLP

Query:  PHREIEFAIELEPGT
        PHRE+EFAIELEPGT
Subjt:  PHREIEFAIELEPGT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACAGAGGTTCAGGGATTTGATTATGCAGATGCAGAAGCAGCACCAGCCTGCCCCACCAGTTCCTGCTCCAGCTCTAGTTGTGCCCCAAGTCGTGCCGGATCAGTT
GTCGGCAGAGGCCAAGCATTTGAGAGATTTTAGAAAGTACAACCCCACGACATTCGATGGGTCTTTGGAGGACCCCACCAAGGCTCAAATGTGGTTATCTTCTTTGGAGA
ACATATTTCGGTATATGAAGATGTTAGGGGGTGACGTGGGTCAGATCACTTGGGAACAGTTCAAGGAGAGTTTCTATGAGAAATTCTTCTCTGCCAGTTTGCGAGATGCC
AAGCAGCAGGAGTTTCTGAACCTGGAGCAAGGCGATAGGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGC
GGCCAGAGCTAATAATTTACAGGAGAGGGCTAACTCGTCCAAGGTTGCAGGTAGAGGTTCGACCTCAGGACAAAAAAGGAAGGCTGAGCAACAGCCTATTTCAGTGCCAC
AGTGGAATTTCAGACCAGGTGGTGAGTTTCACCGCTTCCAGCAGAGACCTTTTGAGGCAAGGGAAGTTGCCAGAGGGAAGCCTTTATGTACCACTTGTGGGAAGCACTAT
CTGGGCCGTTGTTTATTTGGGACCAGGACTTGCTTCAAGTGTAGGAAAGAGGGGCATACAGCTGATAGATGCCCGATGAGACTTACCGGGGGTACACAGAATCAGGGAGC
AGGTGCTCCACATCAGAGTAAAGTCTTTGCTACAAATAAGACTGAGGCTGAGAGAGCAGGCACGGTGGTGATAGGTACGCTTCCAGTGTTGGGGCATTATGCCTTAGTTT
TGTTTGATTCTAGTTCGTCACATTCCTTTATCTCTTCTGCATTTGTGTTGCATGCTCGCTTAGAGGTAGAGCCCCTGCACCATGTTTTATCAGTATCTACTCCTTCTGGG
GAGAATATGTTGTTGAAAGAAAAGGTGAAGGCATGCCAGATTGAGATAGCAGGTCATGTGATTGAAGTAACGTTGTTGGTCCTTGATATGCTTGACTTTAATGTAATTCT
GGGTATGGATTGGCTAGCTGCTAACCATGCTAGCATAGATTGTTCCCGTAAGGAGGTAGCGTTTAACCCTCCCTTGATGGCCAGTTTTAAGTTTAAGGGAGAAGGATCAA
GGTCGTTACCTAAGGTAATCTCAGCTATGAGGGCCAGCAAACTGCTTAGTCAGGGTACTTGGAGTATCTTAGCAAGTGTGATGGATACTAGAGAGGTTGATGTGTCCTTG
TCATCAGAACCAGTGGTGAGGGACTATCCGGATGTCTTTCTTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGATTGAGTTTGCCATAGAACTGGAGCCGGGTACGTT
CCTATATGCAGAGCTCCATACAGAATGGCCCCAAGAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACAGAGGTTCAGGGATTTGATTATGCAGATGCAGAAGCAGCACCAGCCTGCCCCACCAGTTCCTGCTCCAGCTCTAGTTGTGCCCCAAGTCGTGCCGGATCAGTT
GTCGGCAGAGGCCAAGCATTTGAGAGATTTTAGAAAGTACAACCCCACGACATTCGATGGGTCTTTGGAGGACCCCACCAAGGCTCAAATGTGGTTATCTTCTTTGGAGA
ACATATTTCGGTATATGAAGATGTTAGGGGGTGACGTGGGTCAGATCACTTGGGAACAGTTCAAGGAGAGTTTCTATGAGAAATTCTTCTCTGCCAGTTTGCGAGATGCC
AAGCAGCAGGAGTTTCTGAACCTGGAGCAAGGCGATAGGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGC
GGCCAGAGCTAATAATTTACAGGAGAGGGCTAACTCGTCCAAGGTTGCAGGTAGAGGTTCGACCTCAGGACAAAAAAGGAAGGCTGAGCAACAGCCTATTTCAGTGCCAC
AGTGGAATTTCAGACCAGGTGGTGAGTTTCACCGCTTCCAGCAGAGACCTTTTGAGGCAAGGGAAGTTGCCAGAGGGAAGCCTTTATGTACCACTTGTGGGAAGCACTAT
CTGGGCCGTTGTTTATTTGGGACCAGGACTTGCTTCAAGTGTAGGAAAGAGGGGCATACAGCTGATAGATGCCCGATGAGACTTACCGGGGGTACACAGAATCAGGGAGC
AGGTGCTCCACATCAGAGTAAAGTCTTTGCTACAAATAAGACTGAGGCTGAGAGAGCAGGCACGGTGGTGATAGGTACGCTTCCAGTGTTGGGGCATTATGCCTTAGTTT
TGTTTGATTCTAGTTCGTCACATTCCTTTATCTCTTCTGCATTTGTGTTGCATGCTCGCTTAGAGGTAGAGCCCCTGCACCATGTTTTATCAGTATCTACTCCTTCTGGG
GAGAATATGTTGTTGAAAGAAAAGGTGAAGGCATGCCAGATTGAGATAGCAGGTCATGTGATTGAAGTAACGTTGTTGGTCCTTGATATGCTTGACTTTAATGTAATTCT
GGGTATGGATTGGCTAGCTGCTAACCATGCTAGCATAGATTGTTCCCGTAAGGAGGTAGCGTTTAACCCTCCCTTGATGGCCAGTTTTAAGTTTAAGGGAGAAGGATCAA
GGTCGTTACCTAAGGTAATCTCAGCTATGAGGGCCAGCAAACTGCTTAGTCAGGGTACTTGGAGTATCTTAGCAAGTGTGATGGATACTAGAGAGGTTGATGTGTCCTTG
TCATCAGAACCAGTGGTGAGGGACTATCCGGATGTCTTTCTTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGATTGAGTTTGCCATAGAACTGGAGCCGGGTACGTT
CCTATATGCAGAGCTCCATACAGAATGGCCCCAAGAGAATTGA
Protein sequenceShow/hide protein sequence
MEQRFRDLIMQMQKQHQPAPPVPAPALVVPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTKAQMWLSSLENIFRYMKMLGGDVGQITWEQFKESFYEKFFSASLRDA
KQQEFLNLEQGDRTVEQYDAEFDMLSRFAPEMIATEAARANNLQERANSSKVAGRGSTSGQKRKAEQQPISVPQWNFRPGGEFHRFQQRPFEAREVARGKPLCTTCGKHY
LGRCLFGTRTCFKCRKEGHTADRCPMRLTGGTQNQGAGAPHQSKVFATNKTEAERAGTVVIGTLPVLGHYALVLFDSSSSHSFISSAFVLHARLEVEPLHHVLSVSTPSG
ENMLLKEKVKACQIEIAGHVIEVTLLVLDMLDFNVILGMDWLAANHASIDCSRKEVAFNPPLMASFKFKGEGSRSLPKVISAMRASKLLSQGTWSILASVMDTREVDVSL
SSEPVVRDYPDVFLEELPGLPPHREIEFAIELEPGTFLYAELHTEWPQEN