| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0048442.1 pol protein [Cucumis melo var. makuwa] | 2.2e-229 | 68.47 | Show/hide |
Query: ARRGGGKGGRGAGRTQSEEQPTVQAANPPAP-----------------------------TQASPAQAQIVPPPVPMEAQPAPVQLSGKAKHLRDFRKYN
ARRGGG+GGRGAGR Q E P A +P AP QA+P QAQ V PP P EAQP PVQLS +AKHLRDFRKYN
Subjt: ARRGGGKGGRGAGRTQSEEQPTVQAANPPAP-----------------------------TQASPAQAQIVPPPVPMEAQPAPVQLSGKAKHLRDFRKYN
Query: PKTFDGSMDNPTKAQMWLTSIEKIFRYIKCPDDQKVQCTVFFLEDRGTAWWETAERMLGRDVSKITWEQFKDSFNAKFFSANVKYVKQQEFLNLEQGDMT
PKTFDGSMDNPTKAQMWLTSIE IFRY+KCP+DQKVQC VFFLEDRGTAWWETAERMLG DV+KITWEQFK++F AKFFSANVK+ K QEFLNLEQGDMT
Subjt: PKTFDGSMDNPTKAQMWLTSIEKIFRYIKCPDDQKVQCTVFFLEDRGTAWWETAERMLGRDVSKITWEQFKDSFNAKFFSANVKYVKQQEFLNLEQGDMT
Query: VEQYDAEFDMLSRFAADVLKDEEARTEKLIRGLRQDLQGIVRALRPTTHANDLRLALDLSLHERAYPSKAIGRGSALGQKSKVESQPDMTPQRNLRSGGI
VEQYDAEFDMLSRFA D+++DE ARTEK +RGLR DLQGIVRALRP THA+ LR+ALDLSL ERA SKA GRGSALGQK KVE+QPD+TPQR LRSGG+
Subjt: VEQYDAEFDMLSRFAADVLKDEEARTEKLIRGLRQDLQGIVRALRPTTHANDLRLALDLSLHERAYPSKAIGRGSALGQKSKVESQPDMTPQRNLRSGGI
Query: FQRHRRKLAAAGRTLKELPVCPSCGRVHGGRCLAGSGVCFRCRQPGHTADACPWKLIETTPHQPPASKQGRVFATTRQEAKRAGNVVT------------
FQRHRR+LAAAGRTL+ELP C +CGRVHGGRCLAGSGVCFRCRQ GHTAD CP K ETTP QP AS+QGRVFATTRQEA+RAG VVT
Subjt: FQRHRRKLAAAGRTLKELPVCPSCGRVHGGRCLAGSGVCFRCRQPGHTADACPWKLIETTPHQPPASKQGRVFATTRQEAKRAGNVVT------------
Query: -------------------------------------------------------------------------GIVCIPKVISAMKAGKLLSQGTWSILA
G+VCIPKVISAMKA KLLSQGTW ILA
Subjt: -------------------------------------------------------------------------GIVCIPKVISAMKAGKLLSQGTWSILA
Query: SVLDTRELEVSLSSKPVVREYPDVFPDELPGLPPPREIDFAIELESDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSM
SV+D RE EVSLSS+PVVREYPDVFPDELPGLP PRE+DFAIELE TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW AP+LFVK KDGSM
Subjt: SVLDTRELEVSLSSKPVVREYPDVFPDELPGLPPPREIDFAIELESDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSM
Query: RLCIDYRELNKVTVKNRYPLPMIDDLFD
RLCIDYRELNKVTVKNRYPLP IDDLFD
Subjt: RLCIDYRELNKVTVKNRYPLPMIDDLFD
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| KAA0053272.1 gag protease polyprotein [Cucumis melo var. makuwa] | 6.7e-226 | 64.71 | Show/hide |
Query: ARRGGGKGGRGAGRTQSEEQPTVQAANPPAP-----------------------------TQASPAQAQIVPPPVPMEAQPAPVQLSGKAKHLRDFRKYN
ARRGGG+GGRGAGR Q E P A +P AP QA+P QAQ V PP P EAQP PVQLS +AKHLRDFRKYN
Subjt: ARRGGGKGGRGAGRTQSEEQPTVQAANPPAP-----------------------------TQASPAQAQIVPPPVPMEAQPAPVQLSGKAKHLRDFRKYN
Query: PKTFDGSMDNPTKAQMWLTSIEKIFRYIKCPDDQKVQCTVFFLEDRGTAWWETAERMLGRDVSKITWEQFKDSFNAKFFSANVKYVKQQEFLNLEQGDMT
PKTFDGSMDNPTKAQMWLTSIE IFRY+KCP+DQKVQC VFFLEDRGTAWWETAERMLG DVSKITWEQFK++F AKFFSANVK+ K QEFLNLEQGDMT
Subjt: PKTFDGSMDNPTKAQMWLTSIEKIFRYIKCPDDQKVQCTVFFLEDRGTAWWETAERMLGRDVSKITWEQFKDSFNAKFFSANVKYVKQQEFLNLEQGDMT
Query: VEQYDAEFDMLSRFAADVLKDEEARTEKLIRGLRQDLQGIVRALRPTTHANDLRLALDLSLHERAYPSKAIGRGSALGQKSKVESQPDMTPQRNLRSGGI
VEQYDAEFDMLSRFA D+++DE ARTEK +RGLR DLQGIVRALRP THA+ LR+ALDLSL ERA SKA GRGSALGQK KVE+QPD+ PQR LRSGG+
Subjt: VEQYDAEFDMLSRFAADVLKDEEARTEKLIRGLRQDLQGIVRALRPTTHANDLRLALDLSLHERAYPSKAIGRGSALGQKSKVESQPDMTPQRNLRSGGI
Query: FQRHRRKLAAAGRTLKELPVCPSCGRVHGGRCLAGSGVCFRCRQPGHTADACPWKLIETTPHQPPASKQGRVFATTRQEAKRAGNVVT------------
FQRHR++LAAAGRTL+ELP C +CGRVHGGRCLAGSGVCFRCRQPGHTAD CP K ETTP QP A++QGRVFATTRQEA+RAG VVT
Subjt: FQRHRRKLAAAGRTLKELPVCPSCGRVHGGRCLAGSGVCFRCRQPGHTADACPWKLIETTPHQPPASKQGRVFATTRQEAKRAGNVVT------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------GIVCIPKVISAMKAGKLLSQGTWSILASVLDTRELEVSLSSKPVVREYPDVFPDELPGLPPPREIDFAIELESDTAPISRAPYRMAPAELKE
G+VCIPKVISAMKA KLLSQGTW ILASV+D RE EVSLSS+PVVREYPDVFPDELPGLPPPRE+DFAIELE TAPISRAPYRMAPAELKE
Subjt: --------GIVCIPKVISAMKAGKLLSQGTWSILASVLDTRELEVSLSSKPVVREYPDVFPDELPGLPPPREIDFAIELESDTAPISRAPYRMAPAELKE
Query: LKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPMIDDLFD
KVQLQELLDKGFIRPSVSPW AP+LFVKKKDGSMRLCIDYRELNKVTVKNRYPLP I+DLFD
Subjt: LKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPMIDDLFD
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| KAA0053574.1 pol protein [Cucumis melo var. makuwa] | 2.7e-227 | 78.88 | Show/hide |
Query: QASPAQAQIVPPPVPMEAQPAPVQLSGKAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIEKIFRYIKCPDDQKVQCTVFFLEDRGTAWWETAERMLGRD
QA+ QAQ V PP PM +QP PVQLS +AKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIE IFRY+KCP+DQKVQC VFFLEDRGTAWWETAERMLG D
Subjt: QASPAQAQIVPPPVPMEAQPAPVQLSGKAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIEKIFRYIKCPDDQKVQCTVFFLEDRGTAWWETAERMLGRD
Query: VSKITWEQFKDSFNAKFFSANVKYVKQQEFLNLEQGDMTVEQYDAEFDMLSRFAADVLKDEEARTEKLIRGLRQDLQGIVRALRPTTHANDLRLALDLSL
VSKITWEQFKD+F AKFFSANVK+ K QEFLNLEQGDMTVEQYDAEFDMLSRFA DV++DE ARTEK IR LR DLQGIVRALRP THA+ LR+ALDLSL
Subjt: VSKITWEQFKDSFNAKFFSANVKYVKQQEFLNLEQGDMTVEQYDAEFDMLSRFAADVLKDEEARTEKLIRGLRQDLQGIVRALRPTTHANDLRLALDLSL
Query: HERAYPSKAIGRGSALGQKSKVESQPDMTPQRNLRSGGIFQRHRRKLAAAGRTLKELPVCPSCGRVHGGRCLAGSGVCFRCRQPGHTADACPWKLIETTP
+ERA SKA+GRG ALGQK KVE+QPD+ PQR LRSGG+FQRHRR+LAAAGRTL+ LP C +CGRVHGGRCLAGSGVCFRCRQPGHTADACP K IETTP
Subjt: HERAYPSKAIGRGSALGQKSKVESQPDMTPQRNLRSGGIFQRHRRKLAAAGRTLKELPVCPSCGRVHGGRCLAGSGVCFRCRQPGHTADACPWKLIETTP
Query: HQPPASKQGRVFATTRQEAKRAGNVVT----------------------------------GIVCIPKVISAMKAGKLLSQGTWSILASVLDTRELEVSL
HQP AS+QG FATTRQEA+RAG VVT GIVC+PKVISAMKA KLLSQGTW +LA+V+D RE EVSL
Subjt: HQPPASKQGRVFATTRQEAKRAGNVVT----------------------------------GIVCIPKVISAMKAGKLLSQGTWSILASVLDTRELEVSL
Query: SSKPVVREYPDVFPDELPGLPPPREIDFAIELESDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKV
SS+PVVREYPDVFP+EL GLPPPREIDFAIELE TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW AP+LFVKKKDGSMRLCIDYRELNK+
Subjt: SSKPVVREYPDVFPDELPGLPPPREIDFAIELESDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKV
Query: TVKNRYPLPMIDDLFD
TVKN YPLP IDDLFD
Subjt: TVKNRYPLPMIDDLFD
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| KAA0066101.1 reverse transcriptase [Cucumis melo var. makuwa] | 8.8e-226 | 64.71 | Show/hide |
Query: ARRGGGKGGRGAGRTQSEEQPTVQAANPPAP-----------------------------TQASPAQAQIVPPPVPMEAQPAPVQLSGKAKHLRDFRKYN
ARRGGG+GGRGAGR QSEEQP V +P AP QA+P QAQ V PP P+EAQP PVQLS +AKHLRDFRKYN
Subjt: ARRGGGKGGRGAGRTQSEEQPTVQAANPPAP-----------------------------TQASPAQAQIVPPPVPMEAQPAPVQLSGKAKHLRDFRKYN
Query: PKTFDGSMDNPTKAQMWLTSIEKIFRYIKCPDDQKVQCTVFFLEDRGTAWWETAERMLGRDVSKITWEQFKDSFNAKFFSANVKYVKQQEFLNLEQGDMT
PKTFDGSMDNPT AQMWLTSIE IFRY+KCP+DQKVQC VFFLEDRG+AWWETAERMLG DVSKITWEQFK++F AKFFS NVK+ K QEFLNLEQGDMT
Subjt: PKTFDGSMDNPTKAQMWLTSIEKIFRYIKCPDDQKVQCTVFFLEDRGTAWWETAERMLGRDVSKITWEQFKDSFNAKFFSANVKYVKQQEFLNLEQGDMT
Query: VEQYDAEFDMLSRFAADVLKDEEARTEKLIRGLRQDLQGIVRALRPTTHANDLRLALDLSLHERAYPSKAIGRGSALGQKSKVESQPDMTPQRNLRSGGI
VEQYDAEFDMLSRFA DV++DE ARTEK +RGLR DLQGIVRALRP THA+ LR+ALDLSLHERA SKA+ RG ALGQK KVE+QPD+ PQ+ LR GG+
Subjt: VEQYDAEFDMLSRFAADVLKDEEARTEKLIRGLRQDLQGIVRALRPTTHANDLRLALDLSLHERAYPSKAIGRGSALGQKSKVESQPDMTPQRNLRSGGI
Query: FQRHRRKLAAAGRTLKELPVCPSCGRVHGGRCLAGSGVCFRCRQPGHTADACPWKLIETTPHQPPASKQGRVFATTRQEAKRAGNVVT------------
FQRHRR+LAAAGRTL+ELP C +CGRVHGGRCLAGSGVCFRCRQ GHTADACP K ETTPHQP AS+QGRVF TTRQEA+RAG VVT
Subjt: FQRHRRKLAAAGRTLKELPVCPSCGRVHGGRCLAGSGVCFRCRQPGHTADACPWKLIETTPHQPPASKQGRVFATTRQEAKRAGNVVT------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------GIVCIPKVISAMKAGKLLSQGTWSILASVLDTRELEVSLSSKPVVREYPDVFPDELPGLPPPREIDFAIELESDTAPISRAPYRMAPAELKE
GIVCIPKVISAMKA KLL+QGTW ILASV+DTRE EVSLSS+PVVREYPDVFPDEL GLPPPREI FAIELE TAPISRAPYRMAPAELKE
Subjt: --------GIVCIPKVISAMKAGKLLSQGTWSILASVLDTRELEVSLSSKPVVREYPDVFPDELPGLPPPREIDFAIELESDTAPISRAPYRMAPAELKE
Query: LKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPMIDDLFD
KVQLQELLDKGFIRPSVSPW AP+LFVKKKDGSMRLCIDYRELNKVT+KNRYPLP IDDLFD
Subjt: LKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPMIDDLFD
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| TYK19164.1 pol protein [Cucumis melo var. makuwa] | 2.7e-227 | 78.88 | Show/hide |
Query: QASPAQAQIVPPPVPMEAQPAPVQLSGKAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIEKIFRYIKCPDDQKVQCTVFFLEDRGTAWWETAERMLGRD
QA+ QAQ V PP PM +QP PVQLS +AKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIE IFRY+KCP+DQKVQC VFFLEDRGTAWWETAERMLG D
Subjt: QASPAQAQIVPPPVPMEAQPAPVQLSGKAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIEKIFRYIKCPDDQKVQCTVFFLEDRGTAWWETAERMLGRD
Query: VSKITWEQFKDSFNAKFFSANVKYVKQQEFLNLEQGDMTVEQYDAEFDMLSRFAADVLKDEEARTEKLIRGLRQDLQGIVRALRPTTHANDLRLALDLSL
VSKITWEQFKD+F AKFFSANVK+ K QEFLNLEQGDMTVEQYDAEFDMLSRFA DV++DE ARTEK IR LR DLQGIVRALRP THA+ LR+ALDLSL
Subjt: VSKITWEQFKDSFNAKFFSANVKYVKQQEFLNLEQGDMTVEQYDAEFDMLSRFAADVLKDEEARTEKLIRGLRQDLQGIVRALRPTTHANDLRLALDLSL
Query: HERAYPSKAIGRGSALGQKSKVESQPDMTPQRNLRSGGIFQRHRRKLAAAGRTLKELPVCPSCGRVHGGRCLAGSGVCFRCRQPGHTADACPWKLIETTP
+ERA SKA+GRG ALGQK KVE+QPD+ PQR LRSGG+FQRHRR+LAAAGRTL+ LP C +CGRVHGGRCLAGSGVCFRCRQPGHTADACP K IETTP
Subjt: HERAYPSKAIGRGSALGQKSKVESQPDMTPQRNLRSGGIFQRHRRKLAAAGRTLKELPVCPSCGRVHGGRCLAGSGVCFRCRQPGHTADACPWKLIETTP
Query: HQPPASKQGRVFATTRQEAKRAGNVVT----------------------------------GIVCIPKVISAMKAGKLLSQGTWSILASVLDTRELEVSL
HQP AS+QG FATTRQEA+RAG VVT GIVC+PKVISAMKA KLLSQGTW +LA+V+D RE EVSL
Subjt: HQPPASKQGRVFATTRQEAKRAGNVVT----------------------------------GIVCIPKVISAMKAGKLLSQGTWSILASVLDTRELEVSL
Query: SSKPVVREYPDVFPDELPGLPPPREIDFAIELESDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKV
SS+PVVREYPDVFP+EL GLPPPREIDFAIELE TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW AP+LFVKKKDGSMRLCIDYRELNK+
Subjt: SSKPVVREYPDVFPDELPGLPPPREIDFAIELESDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKV
Query: TVKNRYPLPMIDDLFD
TVKN YPLP IDDLFD
Subjt: TVKNRYPLPMIDDLFD
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TY28 Reverse transcriptase | 1.1e-229 | 68.47 | Show/hide |
Query: ARRGGGKGGRGAGRTQSEEQPTVQAANPPAP-----------------------------TQASPAQAQIVPPPVPMEAQPAPVQLSGKAKHLRDFRKYN
ARRGGG+GGRGAGR Q E P A +P AP QA+P QAQ V PP P EAQP PVQLS +AKHLRDFRKYN
Subjt: ARRGGGKGGRGAGRTQSEEQPTVQAANPPAP-----------------------------TQASPAQAQIVPPPVPMEAQPAPVQLSGKAKHLRDFRKYN
Query: PKTFDGSMDNPTKAQMWLTSIEKIFRYIKCPDDQKVQCTVFFLEDRGTAWWETAERMLGRDVSKITWEQFKDSFNAKFFSANVKYVKQQEFLNLEQGDMT
PKTFDGSMDNPTKAQMWLTSIE IFRY+KCP+DQKVQC VFFLEDRGTAWWETAERMLG DV+KITWEQFK++F AKFFSANVK+ K QEFLNLEQGDMT
Subjt: PKTFDGSMDNPTKAQMWLTSIEKIFRYIKCPDDQKVQCTVFFLEDRGTAWWETAERMLGRDVSKITWEQFKDSFNAKFFSANVKYVKQQEFLNLEQGDMT
Query: VEQYDAEFDMLSRFAADVLKDEEARTEKLIRGLRQDLQGIVRALRPTTHANDLRLALDLSLHERAYPSKAIGRGSALGQKSKVESQPDMTPQRNLRSGGI
VEQYDAEFDMLSRFA D+++DE ARTEK +RGLR DLQGIVRALRP THA+ LR+ALDLSL ERA SKA GRGSALGQK KVE+QPD+TPQR LRSGG+
Subjt: VEQYDAEFDMLSRFAADVLKDEEARTEKLIRGLRQDLQGIVRALRPTTHANDLRLALDLSLHERAYPSKAIGRGSALGQKSKVESQPDMTPQRNLRSGGI
Query: FQRHRRKLAAAGRTLKELPVCPSCGRVHGGRCLAGSGVCFRCRQPGHTADACPWKLIETTPHQPPASKQGRVFATTRQEAKRAGNVVT------------
FQRHRR+LAAAGRTL+ELP C +CGRVHGGRCLAGSGVCFRCRQ GHTAD CP K ETTP QP AS+QGRVFATTRQEA+RAG VVT
Subjt: FQRHRRKLAAAGRTLKELPVCPSCGRVHGGRCLAGSGVCFRCRQPGHTADACPWKLIETTPHQPPASKQGRVFATTRQEAKRAGNVVT------------
Query: -------------------------------------------------------------------------GIVCIPKVISAMKAGKLLSQGTWSILA
G+VCIPKVISAMKA KLLSQGTW ILA
Subjt: -------------------------------------------------------------------------GIVCIPKVISAMKAGKLLSQGTWSILA
Query: SVLDTRELEVSLSSKPVVREYPDVFPDELPGLPPPREIDFAIELESDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSM
SV+D RE EVSLSS+PVVREYPDVFPDELPGLP PRE+DFAIELE TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW AP+LFVK KDGSM
Subjt: SVLDTRELEVSLSSKPVVREYPDVFPDELPGLPPPREIDFAIELESDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSM
Query: RLCIDYRELNKVTVKNRYPLPMIDDLFD
RLCIDYRELNKVTVKNRYPLP IDDLFD
Subjt: RLCIDYRELNKVTVKNRYPLPMIDDLFD
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| A0A5A7UC03 Gag protease polyprotein | 3.3e-226 | 64.71 | Show/hide |
Query: ARRGGGKGGRGAGRTQSEEQPTVQAANPPAP-----------------------------TQASPAQAQIVPPPVPMEAQPAPVQLSGKAKHLRDFRKYN
ARRGGG+GGRGAGR Q E P A +P AP QA+P QAQ V PP P EAQP PVQLS +AKHLRDFRKYN
Subjt: ARRGGGKGGRGAGRTQSEEQPTVQAANPPAP-----------------------------TQASPAQAQIVPPPVPMEAQPAPVQLSGKAKHLRDFRKYN
Query: PKTFDGSMDNPTKAQMWLTSIEKIFRYIKCPDDQKVQCTVFFLEDRGTAWWETAERMLGRDVSKITWEQFKDSFNAKFFSANVKYVKQQEFLNLEQGDMT
PKTFDGSMDNPTKAQMWLTSIE IFRY+KCP+DQKVQC VFFLEDRGTAWWETAERMLG DVSKITWEQFK++F AKFFSANVK+ K QEFLNLEQGDMT
Subjt: PKTFDGSMDNPTKAQMWLTSIEKIFRYIKCPDDQKVQCTVFFLEDRGTAWWETAERMLGRDVSKITWEQFKDSFNAKFFSANVKYVKQQEFLNLEQGDMT
Query: VEQYDAEFDMLSRFAADVLKDEEARTEKLIRGLRQDLQGIVRALRPTTHANDLRLALDLSLHERAYPSKAIGRGSALGQKSKVESQPDMTPQRNLRSGGI
VEQYDAEFDMLSRFA D+++DE ARTEK +RGLR DLQGIVRALRP THA+ LR+ALDLSL ERA SKA GRGSALGQK KVE+QPD+ PQR LRSGG+
Subjt: VEQYDAEFDMLSRFAADVLKDEEARTEKLIRGLRQDLQGIVRALRPTTHANDLRLALDLSLHERAYPSKAIGRGSALGQKSKVESQPDMTPQRNLRSGGI
Query: FQRHRRKLAAAGRTLKELPVCPSCGRVHGGRCLAGSGVCFRCRQPGHTADACPWKLIETTPHQPPASKQGRVFATTRQEAKRAGNVVT------------
FQRHR++LAAAGRTL+ELP C +CGRVHGGRCLAGSGVCFRCRQPGHTAD CP K ETTP QP A++QGRVFATTRQEA+RAG VVT
Subjt: FQRHRRKLAAAGRTLKELPVCPSCGRVHGGRCLAGSGVCFRCRQPGHTADACPWKLIETTPHQPPASKQGRVFATTRQEAKRAGNVVT------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------GIVCIPKVISAMKAGKLLSQGTWSILASVLDTRELEVSLSSKPVVREYPDVFPDELPGLPPPREIDFAIELESDTAPISRAPYRMAPAELKE
G+VCIPKVISAMKA KLLSQGTW ILASV+D RE EVSLSS+PVVREYPDVFPDELPGLPPPRE+DFAIELE TAPISRAPYRMAPAELKE
Subjt: --------GIVCIPKVISAMKAGKLLSQGTWSILASVLDTRELEVSLSSKPVVREYPDVFPDELPGLPPPREIDFAIELESDTAPISRAPYRMAPAELKE
Query: LKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPMIDDLFD
KVQLQELLDKGFIRPSVSPW AP+LFVKKKDGSMRLCIDYRELNKVTVKNRYPLP I+DLFD
Subjt: LKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPMIDDLFD
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| A0A5A7UED4 Pol protein | 1.3e-227 | 78.88 | Show/hide |
Query: QASPAQAQIVPPPVPMEAQPAPVQLSGKAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIEKIFRYIKCPDDQKVQCTVFFLEDRGTAWWETAERMLGRD
QA+ QAQ V PP PM +QP PVQLS +AKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIE IFRY+KCP+DQKVQC VFFLEDRGTAWWETAERMLG D
Subjt: QASPAQAQIVPPPVPMEAQPAPVQLSGKAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIEKIFRYIKCPDDQKVQCTVFFLEDRGTAWWETAERMLGRD
Query: VSKITWEQFKDSFNAKFFSANVKYVKQQEFLNLEQGDMTVEQYDAEFDMLSRFAADVLKDEEARTEKLIRGLRQDLQGIVRALRPTTHANDLRLALDLSL
VSKITWEQFKD+F AKFFSANVK+ K QEFLNLEQGDMTVEQYDAEFDMLSRFA DV++DE ARTEK IR LR DLQGIVRALRP THA+ LR+ALDLSL
Subjt: VSKITWEQFKDSFNAKFFSANVKYVKQQEFLNLEQGDMTVEQYDAEFDMLSRFAADVLKDEEARTEKLIRGLRQDLQGIVRALRPTTHANDLRLALDLSL
Query: HERAYPSKAIGRGSALGQKSKVESQPDMTPQRNLRSGGIFQRHRRKLAAAGRTLKELPVCPSCGRVHGGRCLAGSGVCFRCRQPGHTADACPWKLIETTP
+ERA SKA+GRG ALGQK KVE+QPD+ PQR LRSGG+FQRHRR+LAAAGRTL+ LP C +CGRVHGGRCLAGSGVCFRCRQPGHTADACP K IETTP
Subjt: HERAYPSKAIGRGSALGQKSKVESQPDMTPQRNLRSGGIFQRHRRKLAAAGRTLKELPVCPSCGRVHGGRCLAGSGVCFRCRQPGHTADACPWKLIETTP
Query: HQPPASKQGRVFATTRQEAKRAGNVVT----------------------------------GIVCIPKVISAMKAGKLLSQGTWSILASVLDTRELEVSL
HQP AS+QG FATTRQEA+RAG VVT GIVC+PKVISAMKA KLLSQGTW +LA+V+D RE EVSL
Subjt: HQPPASKQGRVFATTRQEAKRAGNVVT----------------------------------GIVCIPKVISAMKAGKLLSQGTWSILASVLDTRELEVSL
Query: SSKPVVREYPDVFPDELPGLPPPREIDFAIELESDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKV
SS+PVVREYPDVFP+EL GLPPPREIDFAIELE TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW AP+LFVKKKDGSMRLCIDYRELNK+
Subjt: SSKPVVREYPDVFPDELPGLPPPREIDFAIELESDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKV
Query: TVKNRYPLPMIDDLFD
TVKN YPLP IDDLFD
Subjt: TVKNRYPLPMIDDLFD
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| A0A5A7VK60 Reverse transcriptase | 4.3e-226 | 64.71 | Show/hide |
Query: ARRGGGKGGRGAGRTQSEEQPTVQAANPPAP-----------------------------TQASPAQAQIVPPPVPMEAQPAPVQLSGKAKHLRDFRKYN
ARRGGG+GGRGAGR QSEEQP V +P AP QA+P QAQ V PP P+EAQP PVQLS +AKHLRDFRKYN
Subjt: ARRGGGKGGRGAGRTQSEEQPTVQAANPPAP-----------------------------TQASPAQAQIVPPPVPMEAQPAPVQLSGKAKHLRDFRKYN
Query: PKTFDGSMDNPTKAQMWLTSIEKIFRYIKCPDDQKVQCTVFFLEDRGTAWWETAERMLGRDVSKITWEQFKDSFNAKFFSANVKYVKQQEFLNLEQGDMT
PKTFDGSMDNPT AQMWLTSIE IFRY+KCP+DQKVQC VFFLEDRG+AWWETAERMLG DVSKITWEQFK++F AKFFS NVK+ K QEFLNLEQGDMT
Subjt: PKTFDGSMDNPTKAQMWLTSIEKIFRYIKCPDDQKVQCTVFFLEDRGTAWWETAERMLGRDVSKITWEQFKDSFNAKFFSANVKYVKQQEFLNLEQGDMT
Query: VEQYDAEFDMLSRFAADVLKDEEARTEKLIRGLRQDLQGIVRALRPTTHANDLRLALDLSLHERAYPSKAIGRGSALGQKSKVESQPDMTPQRNLRSGGI
VEQYDAEFDMLSRFA DV++DE ARTEK +RGLR DLQGIVRALRP THA+ LR+ALDLSLHERA SKA+ RG ALGQK KVE+QPD+ PQ+ LR GG+
Subjt: VEQYDAEFDMLSRFAADVLKDEEARTEKLIRGLRQDLQGIVRALRPTTHANDLRLALDLSLHERAYPSKAIGRGSALGQKSKVESQPDMTPQRNLRSGGI
Query: FQRHRRKLAAAGRTLKELPVCPSCGRVHGGRCLAGSGVCFRCRQPGHTADACPWKLIETTPHQPPASKQGRVFATTRQEAKRAGNVVT------------
FQRHRR+LAAAGRTL+ELP C +CGRVHGGRCLAGSGVCFRCRQ GHTADACP K ETTPHQP AS+QGRVF TTRQEA+RAG VVT
Subjt: FQRHRRKLAAAGRTLKELPVCPSCGRVHGGRCLAGSGVCFRCRQPGHTADACPWKLIETTPHQPPASKQGRVFATTRQEAKRAGNVVT------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------GIVCIPKVISAMKAGKLLSQGTWSILASVLDTRELEVSLSSKPVVREYPDVFPDELPGLPPPREIDFAIELESDTAPISRAPYRMAPAELKE
GIVCIPKVISAMKA KLL+QGTW ILASV+DTRE EVSLSS+PVVREYPDVFPDEL GLPPPREI FAIELE TAPISRAPYRMAPAELKE
Subjt: --------GIVCIPKVISAMKAGKLLSQGTWSILASVLDTRELEVSLSSKPVVREYPDVFPDELPGLPPPREIDFAIELESDTAPISRAPYRMAPAELKE
Query: LKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPMIDDLFD
KVQLQELLDKGFIRPSVSPW AP+LFVKKKDGSMRLCIDYRELNKVT+KNRYPLP IDDLFD
Subjt: LKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPMIDDLFD
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| A0A5D3D6H0 Pol protein | 1.3e-227 | 78.88 | Show/hide |
Query: QASPAQAQIVPPPVPMEAQPAPVQLSGKAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIEKIFRYIKCPDDQKVQCTVFFLEDRGTAWWETAERMLGRD
QA+ QAQ V PP PM +QP PVQLS +AKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIE IFRY+KCP+DQKVQC VFFLEDRGTAWWETAERMLG D
Subjt: QASPAQAQIVPPPVPMEAQPAPVQLSGKAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIEKIFRYIKCPDDQKVQCTVFFLEDRGTAWWETAERMLGRD
Query: VSKITWEQFKDSFNAKFFSANVKYVKQQEFLNLEQGDMTVEQYDAEFDMLSRFAADVLKDEEARTEKLIRGLRQDLQGIVRALRPTTHANDLRLALDLSL
VSKITWEQFKD+F AKFFSANVK+ K QEFLNLEQGDMTVEQYDAEFDMLSRFA DV++DE ARTEK IR LR DLQGIVRALRP THA+ LR+ALDLSL
Subjt: VSKITWEQFKDSFNAKFFSANVKYVKQQEFLNLEQGDMTVEQYDAEFDMLSRFAADVLKDEEARTEKLIRGLRQDLQGIVRALRPTTHANDLRLALDLSL
Query: HERAYPSKAIGRGSALGQKSKVESQPDMTPQRNLRSGGIFQRHRRKLAAAGRTLKELPVCPSCGRVHGGRCLAGSGVCFRCRQPGHTADACPWKLIETTP
+ERA SKA+GRG ALGQK KVE+QPD+ PQR LRSGG+FQRHRR+LAAAGRTL+ LP C +CGRVHGGRCLAGSGVCFRCRQPGHTADACP K IETTP
Subjt: HERAYPSKAIGRGSALGQKSKVESQPDMTPQRNLRSGGIFQRHRRKLAAAGRTLKELPVCPSCGRVHGGRCLAGSGVCFRCRQPGHTADACPWKLIETTP
Query: HQPPASKQGRVFATTRQEAKRAGNVVT----------------------------------GIVCIPKVISAMKAGKLLSQGTWSILASVLDTRELEVSL
HQP AS+QG FATTRQEA+RAG VVT GIVC+PKVISAMKA KLLSQGTW +LA+V+D RE EVSL
Subjt: HQPPASKQGRVFATTRQEAKRAGNVVT----------------------------------GIVCIPKVISAMKAGKLLSQGTWSILASVLDTRELEVSL
Query: SSKPVVREYPDVFPDELPGLPPPREIDFAIELESDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKV
SS+PVVREYPDVFP+EL GLPPPREIDFAIELE TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW AP+LFVKKKDGSMRLCIDYRELNK+
Subjt: SSKPVVREYPDVFPDELPGLPPPREIDFAIELESDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKV
Query: TVKNRYPLPMIDDLFD
TVKN YPLP IDDLFD
Subjt: TVKNRYPLPMIDDLFD
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| SwissProt top hits | e value | %identity | Alignment |
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| P0CT41 Transposon Tf2-12 polyprotein | 5.7e-10 | 30.36 | Show/hide |
Query: VVREYPDVFPD-ELPGLPPP-REIDFAIELESDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKVTV
+ +E+ D+ + LP P + ++F +EL + + Y + P +++ + ++ + L G IR S + P++FV KK+G++R+ +DY+ LNK
Subjt: VVREYPDVFPD-ELPGLPPP-REIDFAIELESDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKVTV
Query: KNRYPLPMIDDL
N YPLP+I+ L
Subjt: KNRYPLPMIDDL
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| P10394 Retrovirus-related Pol polyprotein from transposon 412 | 1.2e-10 | 30 | Show/hide |
Query: REYPDVFPDELPGLPPPREIDFAIELE--------------SDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDG------
+ +P++F +L + FA+E E D P+ YR ++++E++ Q+Q+L+ + PSVS + +P+L V KK
Subjt: REYPDVFPDELPGLPPPREIDFAIELE--------------SDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDG------
Query: SMRLCIDYRELNKVTVKNRYPLPMIDDLFD
RL IDYR++NK + +++PLP IDD+ D
Subjt: SMRLCIDYRELNKVTVKNRYPLPMIDDLFD
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 1.1e-13 | 38.05 | Show/hide |
Query: REYPDVFPDELPGLPPPREI-DFAIELESDTAPISR----APYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKVT
++Y ++ ++LP P P +I + ++ + + P +R PY + +E+ +Q+LLD FI PS SP +P++ V KKDG+ RLC+DYR LNK T
Subjt: REYPDVFPDELPGLPPPREI-DFAIELESDTAPISR----APYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKVT
Query: VKNRYPLPMIDDL
+ + +PLP ID+L
Subjt: VKNRYPLPMIDDL
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 1.1e-13 | 38.05 | Show/hide |
Query: REYPDVFPDELPGLPPPREI-DFAIELESDTAPISR----APYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKVT
++Y ++ ++LP P P +I + ++ + + P +R PY + +E+ +Q+LLD FI PS SP +P++ V KKDG+ RLC+DYR LNK T
Subjt: REYPDVFPDELPGLPPPREI-DFAIELESDTAPISR----APYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKVT
Query: VKNRYPLPMIDDL
+ + +PLP ID+L
Subjt: VKNRYPLPMIDDL
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| Q9UR07 Transposon Tf2-11 polyprotein | 5.7e-10 | 30.36 | Show/hide |
Query: VVREYPDVFPD-ELPGLPPP-REIDFAIELESDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKVTV
+ +E+ D+ + LP P + ++F +EL + + Y + P +++ + ++ + L G IR S + P++FV KK+G++R+ +DY+ LNK
Subjt: VVREYPDVFPD-ELPGLPPP-REIDFAIELESDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPMLFVKKKDGSMRLCIDYRELNKVTV
Query: KNRYPLPMIDDL
N YPLP+I+ L
Subjt: KNRYPLPMIDDL
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