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Pay0014110 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0014110
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationchr06:13861422..13862095
RNA-Seq ExpressionPay0014110
SyntenyPay0014110
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060761.1 formin-like protein 3 [Cucumis melo var. makuwa]1.2e-7197.28Show/hide
Query:  MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLS--PPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTG
        MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLS  PPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTG
Subjt:  MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLS--PPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTG

Query:  VPGNLYEIDANNSWYYFSGTTRTWPGMAAVVVALGCGALHLMGFSKW
        VPGNLYEIDANNSWYYFSGTT T PGMAAVVVALGCGALHLMGFSKW
Subjt:  VPGNLYEIDANNSWYYFSGTTRTWPGMAAVVVALGCGALHLMGFSKW

KAE8650628.1 hypothetical protein Csa_011452 [Cucumis sativus]5.2e-6488.59Show/hide
Query:  MKMPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLS-----PPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRF
        MKM   AAILLSFSFLS LLLLA+SQTSSPI +DPQNPDAEIKCGSCPCSNPCIQQLS     PPPPPPPSPCTPTVSSRPPPPRFIYT SSPAPPPPRF
Subjt:  MKMPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLS-----PPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRF

Query:  TYTTGVPGNLYEIDANNSWYYFSGTTRTWPGMAAVVVALGCGALHLMGF
        TYTTGVPGNLYEIDANNSWYYFSGT RT PGMAAV VA+GCGALHLMGF
Subjt:  TYTTGVPGNLYEIDANNSWYYFSGTTRTWPGMAAVVVALGCGALHLMGF

KAE8653002.1 hypothetical protein Csa_004575 [Cucumis sativus]4.1e-5389.06Show/hide
Query:  MKMPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLS-----PPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRF
        MKM   AAILLSFSFLS LLLLA+SQTSSPI +DPQNPDAEIKCGSCPCSNPCIQQLS     PPPPPPPSPCTPTVSSRPPPPRFIYT SSPAPPPPRF
Subjt:  MKMPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLS-----PPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRF

Query:  TYTTGVPGNLYEIDANNSWYYFSGTTRT
        TYTTGVPGNLYEIDANNSWYYFSGT RT
Subjt:  TYTTGVPGNLYEIDANNSWYYFSGTTRT

XP_011651408.1 leucine-rich repeat extensin-like protein 3 [Cucumis sativus]1.9e-6688.82Show/hide
Query:  MKMPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLS-----PPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRF
        MKM   AAILLSFSFLS LLLLA+SQTSSPI +DPQNPDAEIKCGSCPCSNPCIQQLS     PPPPPPPSPCTPTVSSRPPPPRFIYT SSPAPPPPRF
Subjt:  MKMPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLS-----PPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRF

Query:  TYTTGVPGNLYEIDANNSWYYFSGTTRTWPGMAAVVVALGCGALHLMGFSKW
        TYTTGVPGNLYEIDANNSWYYFSGT RT PGMAAV VA+GCGALHLMGFSKW
Subjt:  TYTTGVPGNLYEIDANNSWYYFSGTTRTWPGMAAVVVALGCGALHLMGFSKW

XP_022984145.1 probable pathogenesis-related protein ARB_02861 [Cucurbita maxima]2.0e-4771.03Show/hide
Query:  MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTGVP
        M  SAAI LS SFL L L LA+SQ  SP  +DPQ+P++EIKCGSCPCSNPC++Q  PPPPPPP  C P +   PPPPRFIYT  SP PPPPRF YTTGVP
Subjt:  MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTGVP

Query:  GNLYEIDANNSWYYFSGTTRTWPGMAAVVVALGCGALHLMGFSKW
        GNLY+IDANN WYYFSGTTR W   AA+VVALGCGAL+LM F KW
Subjt:  GNLYEIDANNSWYYFSGTTRTWPGMAAVVVALGCGALHLMGFSKW

TrEMBL top hitse value%identityAlignment
A0A0A0L7R0 Uncharacterized protein9.2e-6788.82Show/hide
Query:  MKMPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLS-----PPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRF
        MKM   AAILLSFSFLS LLLLA+SQTSSPI +DPQNPDAEIKCGSCPCSNPCIQQLS     PPPPPPPSPCTPTVSSRPPPPRFIYT SSPAPPPPRF
Subjt:  MKMPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLS-----PPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRF

Query:  TYTTGVPGNLYEIDANNSWYYFSGTTRTWPGMAAVVVALGCGALHLMGFSKW
        TYTTGVPGNLYEIDANNSWYYFSGT RT PGMAAV VA+GCGALHLMGFSKW
Subjt:  TYTTGVPGNLYEIDANNSWYYFSGTTRTWPGMAAVVVALGCGALHLMGFSKW

A0A5A7V4T2 Formin-like protein 35.6e-7297.28Show/hide
Query:  MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLS--PPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTG
        MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLS  PPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTG
Subjt:  MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLS--PPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTG

Query:  VPGNLYEIDANNSWYYFSGTTRTWPGMAAVVVALGCGALHLMGFSKW
        VPGNLYEIDANNSWYYFSGTT T PGMAAVVVALGCGALHLMGFSKW
Subjt:  VPGNLYEIDANNSWYYFSGTTRTWPGMAAVVVALGCGALHLMGFSKW

A0A6J1BC02 probable pathogenesis-related protein ARB_028612.1e-1854.55Show/hide
Query:  PQNPDAEIKCGSCPCSNPCIQQ-LSPPPPPPPSPCTPTVSSRPPPPRFIYTMSSP-APPPPRFTYTTGVPGNLYEIDANNSWYYFSGTTRTWPGMAAVVV
        PQ P  EIKCG+CPC NPC QQ L PPPPPPPSP        PPPPRFIY    P  PPPPRF Y TGVPG LY  DA++ W +FS   R   G+  +++
Subjt:  PQNPDAEIKCGSCPCSNPCIQQ-LSPPPPPPPSPCTPTVSSRPPPPRFIYTMSSP-APPPPRFTYTTGVPGNLYEIDANNSWYYFSGTTRTWPGMAAVVV

Query:  ALGCGALHLM
        + G G L L+
Subjt:  ALGCGALHLM

A0A6J1GAW3 leucine-rich repeat extensin-like protein 21.0e-2555.1Show/hide
Query:  MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCP-CSNPCIQQLSPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTGV
        M  SAAI LS       LLL+  QTS PIS  P +PD EI C S   CSNP +QQL P PP PP P         PPPRF YT  S  PPP RF YTTGV
Subjt:  MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCP-CSNPCIQQLSPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTGV

Query:  PGNLYEIDANNSWYYFSGTTRTWPGMAA-VVVALGCGALHLMGFSKW
        P +LY+ D  N WYYFSG     P MAA VVV L CGAL L+ F KW
Subjt:  PGNLYEIDANNSWYYFSGTTRTWPGMAA-VVVALGCGALHLMGFSKW

A0A6J1J7W0 probable pathogenesis-related protein ARB_028619.6e-4871.03Show/hide
Query:  MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTGVP
        M  SAAI LS SFL L L LA+SQ  SP  +DPQ+P++EIKCGSCPCSNPC++Q  PPPPPPP  C P +   PPPPRFIYT  SP PPPPRF YTTGVP
Subjt:  MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTGVP

Query:  GNLYEIDANNSWYYFSGTTRTWPGMAAVVVALGCGALHLMGFSKW
        GNLY+IDANN WYYFSGTTR W   AA+VVALGCGAL+LM F KW
Subjt:  GNLYEIDANNSWYYFSGTTRTWPGMAAVVVALGCGALHLMGFSKW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02405.1 proline-rich family protein9.9e-0538.24Show/hide
Query:  LSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPSPCTPT-VSSRPPPPRFIYTMSSPAPPPPR-------FTYTTGVPGNLYE
        L+  +L+A    +SPI I+ ++  AE+     PC      Q  PPP PPP  CTP+     PPPP+      SP PPPP        FTY    PG+LY 
Subjt:  LSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPSPCTPT-VSSRPPPPRFIYTMSSPAPPPPR-------FTYTTGVPGNLYE

Query:  ID
        I+
Subjt:  ID

AT1G23040.1 hydroxyproline-rich glycoprotein family protein4.8e-0739.05Show/hide
Query:  FSFLSLLLL----LAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPSP----CTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTGVPGN
        F+ + + LL    L +  +SS  S++ +  D   +     CS  CIQ   PP PPPPSP    C P  +  PPPP+ + +   P PPP  F Y TG PGN
Subjt:  FSFLSLLLL----LAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPSP----CTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTGVPGN

Query:  LYEID
        LY +D
Subjt:  LYEID

AT1G70990.1 proline-rich family protein1.5e-0537.38Show/hide
Query:  SAAILLSFSFLSLLLLL--AHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPSPCTPTVSSRPPP-PRFIYTMSSPAPPPPRFTYTTGVP
        +A +L +  FL+  +++  + S T+  +  DP      IKC       PC+Q + PP PPPPSP  P+ +  PPP P      S   PPP  + Y TG P
Subjt:  SAAILLSFSFLSLLLLL--AHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPSPCTPTVSSRPPP-PRFIYTMSSPAPPPPRFTYTTGVP

Query:  GNLYEID
        G LY ID
Subjt:  GNLYEID

AT3G03350.1 NAD(P)-binding Rossmann-fold superfamily protein2.8e-0749.06Show/hide
Query:  TVSSRPPPPRFIY-TMSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTTR
        T   RPPPPR  Y + SS +PPPP++ Y TGVPG LY  + ++ W Y S   R
Subjt:  TVSSRPPPPRFIY-TMSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTTR

AT3G03350.2 NAD(P)-binding Rossmann-fold superfamily protein5.1e-0942.25Show/hide
Query:  TVSSRPPPPRFIY-TMSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTTRTWPGMAAVVVALGCGALH
        T   RPPPPR  Y + SS +PPPP++ Y TGVPG LY  + ++ W Y S   R       V+V +G G ++
Subjt:  TVSSRPPPPRFIY-TMSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTTRTWPGMAAVVVALGCGALH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATGCCCTCTTCCGCCGCCATTTTACTCTCCTTTTCTTTCCTCTCCCTCCTCCTTCTTCTCGCCCACTCTCAAACCTCCTCCCCGATATCAATAGATCCTCAAAA
TCCCGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGTATTCAACAATTATCACCGCCACCGCCACCGCCTCCTTCTCCTTGTACCCCAACGGTGTCCT
CTCGACCACCGCCTCCTAGGTTTATTTATACCATGTCATCACCTGCACCACCGCCTCCAAGGTTTACTTACACGACGGGTGTTCCCGGTAATTTATACGAGATTGATGCG
AATAATAGCTGGTATTACTTCTCTGGCACGACGAGGACGTGGCCTGGCATGGCGGCGGTTGTGGTGGCGCTTGGCTGTGGAGCTTTGCATCTAATGGGGTTTAGTAAGTG
GTGA
mRNA sequenceShow/hide mRNA sequence
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCGCCAACTCAATCCTCATCGATTTTAGAGCTTTTCCCATTACATGAAAATGCCCTCTTCCGCCGCCATTTTACTCTC
CTTTTCTTTCCTCTCCCTCCTCCTTCTTCTCGCCCACTCTCAAACCTCCTCCCCGATATCAATAGATCCTCAAAATCCCGACGCTGAGATCAAATGTGGATCATGCCCTT
GTTCCAATCCATGTATTCAACAATTATCACCGCCACCGCCACCGCCTCCTTCTCCTTGTACCCCAACGGTGTCCTCTCGACCACCGCCTCCTAGGTTTATTTATACCATG
TCATCACCTGCACCACCGCCTCCAAGGTTTACTTACACGACGGGTGTTCCCGGTAATTTATACGAGATTGATGCGAATAATAGCTGGTATTACTTCTCTGGCACGACGAG
GACGTGGCCTGGCATGGCGGCGGTTGTGGTGGCGCTTGGCTGTGGAGCTTTGCATCTAATGGGGTTTAGTAAGTGGTGAAGGATGAATAGCCATATAAAGAAAATTATTG
ATTAATGTGTTGAATTTGGTCTAATTACTAAAAGAAATATTTACTCTTAGTTCATAAAGTATTAAGTATATATATGTATGCTATATGATCTTAATGATTAGATGTCTATT
TATTTACCTTTTCT
Protein sequenceShow/hide protein sequence
MKMPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTGVPGNLYEIDA
NNSWYYFSGTTRTWPGMAAVVVALGCGALHLMGFSKW