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Pay0014117 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0014117
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrotransposon protein
Genome locationchr05:20997392..20997864
RNA-Seq ExpressionPay0014117
SyntenyPay0014117
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035539.1 retrotransposon protein [Cucumis melo var. makuwa]5.8e-4878.86Show/hide
Query:  MAEKLPGCQIHATTVIDSRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFAD
        MAEKLP CQ+ ATTVID RIKTLK+TFQAIA+M G AC+ FGWND+EKCIIAEK LFDNWVRS+PAAK LLNKLF YYDELTYV   D   GRFAETFAD
Subjt:  MAEKLPGCQIHATTVIDSRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFAD

Query:  VGLTSLTGMTDLIWEMEMRSSRP
        VGLTSLTGM +LIW ME +SSRP
Subjt:  VGLTSLTGMTDLIWEMEMRSSRP

KAA0049990.1 retrotransposon protein [Cucumis melo var. makuwa]3.7e-4792.08Show/hide
Query:  MMAEKLPGCQIHATTVIDSRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFA
        MMAEKLPGCQ+HATTVIDSRIKTLKQTFQAIAEM+G AC+  GWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLF YYDELTYVF RDKATGRFAETFA
Subjt:  MMAEKLPGCQIHATTVIDSRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFA

Query:  D
        D
Subjt:  D

KAA0056560.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-4776.8Show/hide
Query:  MMAEKLPGCQIHATTVIDSRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFA
        MMAEKLPGCQ+ ATTVID RIKTLK+TFQAIAEM+G AC+ FGWND+EKCI+AEK LFDNWVRS+PAAK LLNK F YYDELTYVF RD+ATGRFAETFA
Subjt:  MMAEKLPGCQIHATTVIDSRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFA

Query:  DVGLTS-LTGMTDLIWEMEMRSSRP
        +V     +  MTDLIW ME R+SRP
Subjt:  DVGLTS-LTGMTDLIWEMEMRSSRP

TYK07718.1 retrotransposon protein [Cucumis melo var. makuwa]3.7e-4792.08Show/hide
Query:  MMAEKLPGCQIHATTVIDSRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFA
        MMAEKLPGCQ+HATTVIDSRIKTLKQTFQAIAEM+G AC+  GWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLF YYDELTYVF RDKATGRFAETFA
Subjt:  MMAEKLPGCQIHATTVIDSRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFA

Query:  D
        D
Subjt:  D

XP_016899497.1 PREDICTED: uncharacterized protein LOC107990554 [Cucumis melo]3.8e-6092.74Show/hide
Query:  MMAEKLPGCQIHATTVIDSRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFA
        MMAEKLPGCQ+HATTVIDSRIKTLKQTFQAIAEM+G AC+  GWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLF YYDELTYVF RDKATGRFAETFA
Subjt:  MMAEKLPGCQIHATTVIDSRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFA

Query:  DVGLTSLTGMTDLIWEMEMRSSRP
        DVGLTSLTGMTDLIW MEMRSSRP
Subjt:  DVGLTSLTGMTDLIWEMEMRSSRP

TrEMBL top hitse value%identityAlignment
A0A1S4DU21 uncharacterized protein LOC1079905541.9e-6092.74Show/hide
Query:  MMAEKLPGCQIHATTVIDSRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFA
        MMAEKLPGCQ+HATTVIDSRIKTLKQTFQAIAEM+G AC+  GWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLF YYDELTYVF RDKATGRFAETFA
Subjt:  MMAEKLPGCQIHATTVIDSRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFA

Query:  DVGLTSLTGMTDLIWEMEMRSSRP
        DVGLTSLTGMTDLIW MEMRSSRP
Subjt:  DVGLTSLTGMTDLIWEMEMRSSRP

A0A5A7T2E6 Retrotransposon protein2.8e-4878.86Show/hide
Query:  MAEKLPGCQIHATTVIDSRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFAD
        MAEKLP CQ+ ATTVID RIKTLK+TFQAIA+M G AC+ FGWND+EKCIIAEK LFDNWVRS+PAAK LLNKLF YYDELTYV   D   GRFAETFAD
Subjt:  MAEKLPGCQIHATTVIDSRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFAD

Query:  VGLTSLTGMTDLIWEMEMRSSRP
        VGLTSLTGM +LIW ME +SSRP
Subjt:  VGLTSLTGMTDLIWEMEMRSSRP

A0A5A7U3X7 Retrotransposon protein1.8e-4792.08Show/hide
Query:  MMAEKLPGCQIHATTVIDSRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFA
        MMAEKLPGCQ+HATTVIDSRIKTLKQTFQAIAEM+G AC+  GWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLF YYDELTYVF RDKATGRFAETFA
Subjt:  MMAEKLPGCQIHATTVIDSRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFA

Query:  D
        D
Subjt:  D

A0A5A7UNC0 Retrotransposon protein6.2e-4876.8Show/hide
Query:  MMAEKLPGCQIHATTVIDSRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFA
        MMAEKLPGCQ+ ATTVID RIKTLK+TFQAIAEM+G AC+ FGWND+EKCI+AEK LFDNWVRS+PAAK LLNK F YYDELTYVF RD+ATGRFAETFA
Subjt:  MMAEKLPGCQIHATTVIDSRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFA

Query:  DVGLTS-LTGMTDLIWEMEMRSSRP
        +V     +  MTDLIW ME R+SRP
Subjt:  DVGLTS-LTGMTDLIWEMEMRSSRP

A0A5D3C970 Retrotransposon protein1.8e-4792.08Show/hide
Query:  MMAEKLPGCQIHATTVIDSRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFA
        MMAEKLPGCQ+HATTVIDSRIKTLKQTFQAIAEM+G AC+  GWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLF YYDELTYVF RDKATGRFAETFA
Subjt:  MMAEKLPGCQIHATTVIDSRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFA

Query:  D
        D
Subjt:  D

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G27260.1 unknown protein2.6e-0631.18Show/hide
Query:  SRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFADV--GLTSLTG
        SR+K LK  +Q+  ++Q  + + FGW+   K   A   ++ ++++++P  K+L    F ++DEL  +F    ATG+ A    D   GLT   G
Subjt:  SRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFADV--GLTSLTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGCGGAGAAACTACCTGGATGTCAGATCCACGCAACGACTGTAATTGACAGTAGAATAAAGACACTGAAGCAGACATTCCAGGCCATCGCCGAAATGCAGGGTTC
AGCGTGTAATGACTTTGGGTGGAACGATAAAGAGAAATGTATCATTGCGGAGAAAGGATTATTTGATAATTGGGTTAGGTCGTATCCTGCAGCAAAGGAACTCCTGAACA
AACTGTTTTCGTATTACGACGAACTTACATATGTGTTCAGTCGCGATAAGGCAACGGGTCGGTTCGCTGAGACATTTGCCGACGTGGGTCTAACGAGCTTAACGGGTATG
ACGGATTTGATATGGGAGATGGAAATGAGGAGTTCTCGCCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGCGGAGAAACTACCTGGATGTCAGATCCACGCAACGACTGTAATTGACAGTAGAATAAAGACACTGAAGCAGACATTCCAGGCCATCGCCGAAATGCAGGGTTC
AGCGTGTAATGACTTTGGGTGGAACGATAAAGAGAAATGTATCATTGCGGAGAAAGGATTATTTGATAATTGGGTTAGGTCGTATCCTGCAGCAAAGGAACTCCTGAACA
AACTGTTTTCGTATTACGACGAACTTACATATGTGTTCAGTCGCGATAAGGCAACGGGTCGGTTCGCTGAGACATTTGCCGACGTGGGTCTAACGAGCTTAACGGGTATG
ACGGATTTGATATGGGAGATGGAAATGAGGAGTTCTCGCCCGTGA
Protein sequenceShow/hide protein sequence
MMAEKLPGCQIHATTVIDSRIKTLKQTFQAIAEMQGSACNDFGWNDKEKCIIAEKGLFDNWVRSYPAAKELLNKLFSYYDELTYVFSRDKATGRFAETFADVGLTSLTGM
TDLIWEMEMRSSRP