; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0014130 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0014130
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionHistone H2B
Genome locationchr12:9104569..9108622
RNA-Seq ExpressionPay0014130
SyntenyPay0014130
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR000558 - Histone H2B
IPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032592.1 histone H2B.3-like [Cucumis melo var. makuwa]1.6e-51100Show/hide
Query:  MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK
        MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK
Subjt:  MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK

KAA0067561.1 histone H2B.3-like [Cucumis melo var. makuwa]1.3e-3781Show/hide
Query:  MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK
        MEKRYQDML D L  FHAA QT T+P PAPVESQ VP++L VEAKH+RDFRKYN KTFDGSMDNPTKAQMWLTSI+TIFRYMKC NDQKVQ  VFFLE K
Subjt:  MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK

TYJ96192.1 histone H2B.3-like [Cucumis melo var. makuwa]2.0e-3856.88Show/hide
Query:  MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK
        MEKRYQDML+D L  FHAAQQTPT P PA VESQ VPD+L VEAKH+RDFRKYN K FDGSMDNPTKAQMWLTSI+TIFRYM C NDQKVQC VFF ED+
Subjt:  MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK

Query:  VHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARY-----NKKPTITSREIQTAVRLVL
               + + +G     ++ I E+   E   L+R+       +  +T +   TA+  +L
Subjt:  VHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARY-----NKKPTITSREIQTAVRLVL

TYK01350.1 gag protease polyprotein [Cucumis melo var. makuwa]1.3e-3753.63Show/hide
Query:  MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK
        +EKRYQDML+D L SFHAAQQTPT P  A VE Q VP++L  EAKH+RDFRKYN KTFDGSMDNPTK QMWLTSIETIF YMKCH+DQKVQC VFFL+D+
Subjt:  MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK

Query:  VHPDIGISSKAMGIMNSFINDIFEKLAQES------SKLARYNKKPTITSREIQT---AVRLVLPGELAKHAVSEGTKA
            I     A  ++   ++ I  +  +ES      S   RY K+    + E+ T   A+RL L   ++ H  +  +KA
Subjt:  VHPDIGISSKAMGIMNSFINDIFEKLAQES------SKLARYNKKPTITSREIQT---AVRLVLPGELAKHAVSEGTKA

XP_008464373.1 PREDICTED: histone H2B.3-like [Cucumis melo]3.5e-9198.31Show/hide
Query:  MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK
        MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK
Subjt:  MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK

Query:  VHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
           DIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  VHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

TrEMBL top hitse value%identityAlignment
A0A1S3CLF8 Histone H2B1.7e-9198.31Show/hide
Query:  MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK
        MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK
Subjt:  MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK

Query:  VHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
           DIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  VHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

A0A5A7SNH2 Histone H2B.3-like7.7e-52100Show/hide
Query:  MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK
        MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK
Subjt:  MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK

A0A5A7VPS2 Histone H2B.3-like6.4e-3881Show/hide
Query:  MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK
        MEKRYQDML D L  FHAA QT T+P PAPVESQ VP++L VEAKH+RDFRKYN KTFDGSMDNPTKAQMWLTSI+TIFRYMKC NDQKVQ  VFFLE K
Subjt:  MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK

A0A5D3B8M3 Histone H2B.3-like9.8e-3956.88Show/hide
Query:  MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK
        MEKRYQDML+D L  FHAAQQTPT P PA VESQ VPD+L VEAKH+RDFRKYN K FDGSMDNPTKAQMWLTSI+TIFRYM C NDQKVQC VFF ED+
Subjt:  MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK

Query:  VHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARY-----NKKPTITSREIQTAVRLVL
               + + +G     ++ I E+   E   L+R+       +  +T +   TA+  +L
Subjt:  VHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARY-----NKKPTITSREIQTAVRLVL

A0A5D3BQK4 Gag protease polyprotein6.4e-3853.63Show/hide
Query:  MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK
        +EKRYQDML+D L SFHAAQQTPT P  A VE Q VP++L  EAKH+RDFRKYN KTFDGSMDNPTK QMWLTSIETIF YMKCH+DQKVQC VFFL+D+
Subjt:  MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDK

Query:  VHPDIGISSKAMGIMNSFINDIFEKLAQES------SKLARYNKKPTITSREIQT---AVRLVLPGELAKHAVSEGTKA
            I     A  ++   ++ I  +  +ES      S   RY K+    + E+ T   A+RL L   ++ H  +  +KA
Subjt:  VHPDIGISSKAMGIMNSFINDIFEKLAQES------SKLARYNKKPTITSREIQT---AVRLVLPGELAKHAVSEGTKA

SwissProt top hitse value%identityAlignment
O23629 Histone H2B.62.8e-3582.29Show/hide
Query:  MKCHNDQKVQCTVFFLEDKVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        MK  + +  +  +F +  +VHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  MKCHNDQKVQCTVFFLEDKVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

P40283 Histone H2B.111.7e-3582.29Show/hide
Query:  MKCHNDQKVQCTVFFLEDKVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        MK  + +  +  +F +  +VHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  MKCHNDQKVQCTVFFLEDKVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Q1S9I9 Probable histone H2B.13.7e-3591.67Show/hide
Query:  VFFLEDKVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        +F +  +VHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  VFFLEDKVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Q9LQQ4 Histone H2B.19.8e-3685.87Show/hide
Query:  NDQKVQCTVFFLEDKVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        N +  +  +F +  +VHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  NDQKVQCTVFFLEDKVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Q9LZT0 Histone H2B.72.8e-3582.29Show/hide
Query:  MKCHNDQKVQCTVFFLEDKVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        MK  + +  +  +F +  +VHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  MKCHNDQKVQCTVFFLEDKVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Arabidopsis top hitse value%identityAlignment
AT1G07790.1 Histone superfamily protein7.0e-3785.87Show/hide
Query:  NDQKVQCTVFFLEDKVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        N +  +  +F +  +VHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  NDQKVQCTVFFLEDKVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

AT2G28720.1 Histone superfamily protein2.6e-3691.67Show/hide
Query:  VFFLEDKVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        +F +  +VHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  VFFLEDKVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

AT3G45980.1 Histone superfamily protein2.0e-3682.29Show/hide
Query:  MKCHNDQKVQCTVFFLEDKVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        MK  + +  +  +F +  +VHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  MKCHNDQKVQCTVFFLEDKVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

AT3G46030.1 Histone superfamily protein2.0e-3682.29Show/hide
Query:  MKCHNDQKVQCTVFFLEDKVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        MK  + +  +  +F +  +VHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  MKCHNDQKVQCTVFFLEDKVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

AT5G59910.1 Histone superfamily protein1.2e-3682.29Show/hide
Query:  MKCHNDQKVQCTVFFLEDKVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        MK  + +  +  +F +  +VHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  MKCHNDQKVQCTVFFLEDKVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAGATACCAAGATATGCTGAAAGATGATTTAACATCATTTCATGCTGCCCAGCAGACCCCGACCATCCCTCATCCAGCCCCAGTAGAATCTCAGATCGTGCC
AGACCGACTGTTCGTTGAGGCTAAACATATGAGGGACTTTAGGAAGTACAATCGTAAGACTTTTGACGGATCCATGGATAACCCCACCAAGGCTCAGATGTGGTTGACTT
CTATAGAGACCATCTTTCGGTACATGAAGTGCCATAATGACCAAAAAGTTCAGTGCACAGTTTTCTTCTTGGAAGATAAAGTTCATCCCGATATTGGAATCTCCAGCAAA
GCCATGGGTATTATGAACAGTTTTATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAAAAGCCGACCATCACCTCTCGGGAGAT
CCAAACGGCTGTGCGCCTTGTTCTTCCTGGTGAGTTGGCTAAACACGCCGTCTCTGAGGGTACCAAGGCTGTTACCAAGTTTACTAGCTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAGATACCAAGATATGCTGAAAGATGATTTAACATCATTTCATGCTGCCCAGCAGACCCCGACCATCCCTCATCCAGCCCCAGTAGAATCTCAGATCGTGCC
AGACCGACTGTTCGTTGAGGCTAAACATATGAGGGACTTTAGGAAGTACAATCGTAAGACTTTTGACGGATCCATGGATAACCCCACCAAGGCTCAGATGTGGTTGACTT
CTATAGAGACCATCTTTCGGTACATGAAGTGCCATAATGACCAAAAAGTTCAGTGCACAGTTTTCTTCTTGGAAGATAAAGTTCATCCCGATATTGGAATCTCCAGCAAA
GCCATGGGTATTATGAACAGTTTTATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAAAAGCCGACCATCACCTCTCGGGAGAT
CCAAACGGCTGTGCGCCTTGTTCTTCCTGGTGAGTTGGCTAAACACGCCGTCTCTGAGGGTACCAAGGCTGTTACCAAGTTTACTAGCTCTTAG
Protein sequenceShow/hide protein sequence
MEKRYQDMLKDDLTSFHAAQQTPTIPHPAPVESQIVPDRLFVEAKHMRDFRKYNRKTFDGSMDNPTKAQMWLTSIETIFRYMKCHNDQKVQCTVFFLEDKVHPDIGISSK
AMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS