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Pay0014178 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0014178
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr12:12326744..12327136
RNA-Seq ExpressionPay0014178
SyntenyPay0014178
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:0003953 - NAD+ nucleosidase activity (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045262.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]7.1e-4163.85Show/hide
Query:  MTFYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILM
        ++F+K FWHLLK DI+ +F+DF  KG+INK MNNT+I LIAK++  ++P DF+PISLTTS+YK+IAK L+ R+++TLP  I+ NQL F+K RQITDAILM
Subjt:  MTFYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILM

Query:  ANEIVDYSKVRKTKGFVLKLDIKKAFDTIN
        ANE +DY KV+K KGF+LKLDI+KAFD +N
Subjt:  ANEIVDYSKVRKTKGFVLKLDIKKAFDTIN

KAA0046042.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.7e-4069.23Show/hide
Query:  MTFYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILM
        MTFYK FWHLLK DI  V RD  SK IINK +NN +ITLIAK+    KPSD++PISLTTSLYK+ AK+LA+R+++TL   IAE+QL FVKGRQITD ILM
Subjt:  MTFYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILM

Query:  ANEIVDYSKVRKTKGFVLKLDIKKAFDTIN
        ANEIVDY K+RK +GFV KLDIKK FD I+
Subjt:  ANEIVDYSKVRKTKGFVLKLDIKKAFDTIN

KAA0058104.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]7.9e-4063.08Show/hide
Query:  MTFYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILM
        ++F+K +WHLLK DI+ +F+DF  KG+INK MNNT+I LIAK++  + P DF+PISLTTS+YKIIAK L+ R+++TLP  I+ NQL F+K RQITDAIL+
Subjt:  MTFYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILM

Query:  ANEIVDYSKVRKTKGFVLKLDIKKAFDTIN
        ANE +DY KV+K KGF+LKLDI+KAFD +N
Subjt:  ANEIVDYSKVRKTKGFVLKLDIKKAFDTIN

KAA0063661.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.6e-4063.85Show/hide
Query:  MTFYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILM
        ++F+K +WHLLK DI+ +F+DF  KG+INK MNNTFI LIAK+++ + P DF+PISLTTS+YKIIAK L+ R+++TLP  I+ NQL F+K RQITDAILM
Subjt:  MTFYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILM

Query:  ANEIVDYSKVRKTKGFVLKLDIKKAFDTIN
        ANE +DY KV+K KGF+LKLDI+KAFD ++
Subjt:  ANEIVDYSKVRKTKGFVLKLDIKKAFDTIN

TYK01569.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]6.5e-4270Show/hide
Query:  MTFYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILM
        M FYKKFWHLLK DI+ + R+F SK  INKAMNNTFI LIAK  S   P++++PISLTTS+Y+IIAKMLA+R+++TLP  IAE+QL FV+GRQITDAILM
Subjt:  MTFYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILM

Query:  ANEIVDYSKVRKTKGFVLKLDIKKAFDTIN
        ANEI DY K++K KGFVLKLDI+KA DTI+
Subjt:  ANEIVDYSKVRKTKGFVLKLDIKKAFDTIN

TrEMBL top hitse value%identityAlignment
A0A5A7TRL9 LINE-1 retrotransposable element ORF2 protein1.3e-4069.23Show/hide
Query:  MTFYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILM
        MTFYK FWHLLK DI  V RD  SK IINK +NN +ITLIAK+    KPSD++PISLTTSLYK+ AK+LA+R+++TL   IAE+QL FVKGRQITD ILM
Subjt:  MTFYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILM

Query:  ANEIVDYSKVRKTKGFVLKLDIKKAFDTIN
        ANEIVDY K+RK +GFV KLDIKK FD I+
Subjt:  ANEIVDYSKVRKTKGFVLKLDIKKAFDTIN

A0A5A7USG2 LINE-1 retrotransposable element ORF2 protein3.8e-4063.08Show/hide
Query:  MTFYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILM
        ++F+K +WHLLK DI+ +F+DF  KG+INK MNNT+I LIAK++  + P DF+PISLTTS+YKIIAK L+ R+++TLP  I+ NQL F+K RQITDAIL+
Subjt:  MTFYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILM

Query:  ANEIVDYSKVRKTKGFVLKLDIKKAFDTIN
        ANE +DY KV+K KGF+LKLDI+KAFD +N
Subjt:  ANEIVDYSKVRKTKGFVLKLDIKKAFDTIN

A0A5A7VD46 LINE-1 retrotransposable element ORF2 protein7.7e-4163.85Show/hide
Query:  MTFYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILM
        ++F+K +WHLLK DI+ +F+DF  KG+INK MNNTFI LIAK+++ + P DF+PISLTTS+YKIIAK L+ R+++TLP  I+ NQL F+K RQITDAILM
Subjt:  MTFYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILM

Query:  ANEIVDYSKVRKTKGFVLKLDIKKAFDTIN
        ANE +DY KV+K KGF+LKLDI+KAFD ++
Subjt:  ANEIVDYSKVRKTKGFVLKLDIKKAFDTIN

A0A5D3BU01 LINE-1 retrotransposable element ORF2 protein3.1e-4270Show/hide
Query:  MTFYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILM
        M FYKKFWHLLK DI+ + R+F SK  INKAMNNTFI LIAK  S   P++++PISLTTS+Y+IIAKMLA+R+++TLP  IAE+QL FV+GRQITDAILM
Subjt:  MTFYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILM

Query:  ANEIVDYSKVRKTKGFVLKLDIKKAFDTIN
        ANEI DY K++K KGFVLKLDI+KA DTI+
Subjt:  ANEIVDYSKVRKTKGFVLKLDIKKAFDTIN

A0A5D3DZ07 LINE-1 retrotransposable element ORF2 protein3.5e-4163.85Show/hide
Query:  MTFYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILM
        ++F+K FWHLLK DI+ +F+DF  KG+INK MNNT+I LIAK++  ++P DF+PISLTTS+YK+IAK L+ R+++TLP  I+ NQL F+K RQITDAILM
Subjt:  MTFYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILM

Query:  ANEIVDYSKVRKTKGFVLKLDIKKAFDTIN
        ANE +DY KV+K KGF+LKLDI+KAFD +N
Subjt:  ANEIVDYSKVRKTKGFVLKLDIKKAFDTIN

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein2.7e-0630.23Show/hide
Query:  FYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAK-RQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILMA
        FY+++   L   ++K+F+    +GI+  +     I LI K  +   K  +F+PISL     KI+ K+LA RI+  +   I  +Q+ F+ G Q    I  +
Subjt:  FYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAK-RQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILMA

Query:  NEIVDYSKVRKTKGFV-LKLDIKKAFDTI
          ++ +    K K  V + +D +KAFD I
Subjt:  NEIVDYSKVRKTKGFV-LKLDIKKAFDTI

P08548 LINE-1 reverse transcriptase homolog2.3e-0527.91Show/hide
Query:  FYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAK-RQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILMA
        FY+ F   L   ++ +F++   +GI+        ITLI K  +   +  +++PISL     KI+ K+L  RI+  +   I  +Q+ F+ G Q    I  +
Subjt:  FYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAK-RQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILMA

Query:  NEIVDY-SKVRKTKGFVLKLDIKKAFDTI
          ++ + +K++     +L +D +KAFD I
Subjt:  NEIVDY-SKVRKTKGFVLKLDIKKAFDTI

P11369 LINE-1 retrotransposable element ORF2 protein2.0e-0631.58Show/hide
Query:  FYKKFWHLLKVDII----KVFRDFRSKGIINKAMNNTFITLIAKRQ-SCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDA
        F  +F+   K D+I    K+F     +G +  +     ITLI K Q    K  +F+PISL     KI+ K+LA RI+  +   I  +Q+ F+ G Q    
Subjt:  FYKKFWHLLKVDII----KVFRDFRSKGIINKAMNNTFITLIAKRQ-SCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDA

Query:  ILMANEIVDY-SKVRKTKGFVLKLDIKKAFDTI
        I  +  ++ Y +K++     ++ LD +KAFD I
Subjt:  ILMANEIVDY-SKVRKTKGFVLKLDIKKAFDTI

P14381 Transposon TX1 uncharacterized 149 kDa protein8.3e-0826.56Show/hide
Query:  FYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILMAN
        F++ FW  L  D  +V  +   KG +  +     ++L+ K+       +++P+SL ++ YKI+AK ++ R++  L   I  +Q   V GR I D + +  
Subjt:  FYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILMAN

Query:  EIVDYSKVRKTKGFVLKLDIKKAFDTIN
        +++ +++        L LD +KAFD ++
Subjt:  EIVDYSKVRKTKGFVLKLDIKKAFDTIN

Q03274 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment)2.9e-0530.11Show/hide
Query:  TLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILMANEIVDYSKVRKTKGFVLKLDIKKAFDTIN
        TLI K      PS+++PI++ ++L +++ ++LA+R+E  +    A+     + G  + +++L+   I    + RKT   V+ LD++KAFDT++
Subjt:  TLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILMANEIVDYSKVRKTKGFVLKLDIKKAFDTIN

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTTCTACAAAAAATTCTGGCACTTGCTTAAGGTCGATATTATAAAAGTTTTCAGGGACTTTCGTTCAAAAGGTATCATCAATAAGGCTATGAATAACACTTTCAT
TACCCTTATAGCTAAAAGACAAAGCTGTAATAAGCCATCAGACTTCAAGCCTATTAGTCTAACCACATCTCTTTACAAAATCATTGCCAAAATGTTGGCTGAAAGAATAG
AGGTCACCCTCCCGACCAAAATAGCTGAAAATCAACTCGTTTTCGTCAAAGGGAGGCAAATCACAGATGCCATTCTAATGGCAAATGAGATTGTAGACTACTCGAAAGTT
AGAAAAACCAAAGGGTTTGTTCTTAAGCTAGATATCAAAAAAGCTTTTGACACAATCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTTTCTACAAAAAATTCTGGCACTTGCTTAAGGTCGATATTATAAAAGTTTTCAGGGACTTTCGTTCAAAAGGTATCATCAATAAGGCTATGAATAACACTTTCAT
TACCCTTATAGCTAAAAGACAAAGCTGTAATAAGCCATCAGACTTCAAGCCTATTAGTCTAACCACATCTCTTTACAAAATCATTGCCAAAATGTTGGCTGAAAGAATAG
AGGTCACCCTCCCGACCAAAATAGCTGAAAATCAACTCGTTTTCGTCAAAGGGAGGCAAATCACAGATGCCATTCTAATGGCAAATGAGATTGTAGACTACTCGAAAGTT
AGAAAAACCAAAGGGTTTGTTCTTAAGCTAGATATCAAAAAAGCTTTTGACACAATCAATTGA
Protein sequenceShow/hide protein sequence
MTFYKKFWHLLKVDIIKVFRDFRSKGIINKAMNNTFITLIAKRQSCNKPSDFKPISLTTSLYKIIAKMLAERIEVTLPTKIAENQLVFVKGRQITDAILMANEIVDYSKV
RKTKGFVLKLDIKKAFDTIN