| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032680.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.5e-67 | 100 | Show/hide |
Query: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Subjt: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Query: VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Subjt: VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
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| KAA0036309.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.5e-67 | 100 | Show/hide |
Query: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Subjt: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Query: VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Subjt: VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
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| TYJ95793.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.5e-67 | 100 | Show/hide |
Query: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Subjt: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Query: VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Subjt: VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
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| TYK21117.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.5e-67 | 100 | Show/hide |
Query: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Subjt: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Query: VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Subjt: VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
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| TYK27376.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.5e-67 | 100 | Show/hide |
Query: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Subjt: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Query: VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Subjt: VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SP72 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-67 | 100 | Show/hide |
Query: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Subjt: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Query: VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Subjt: VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
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| A0A5D3DBU0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-67 | 100 | Show/hide |
Query: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Subjt: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Query: VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Subjt: VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
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| A0A5D3DMJ1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-67 | 100 | Show/hide |
Query: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Subjt: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Query: VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Subjt: VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
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| A0A5D3DUI8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-67 | 100 | Show/hide |
Query: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Subjt: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Query: VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Subjt: VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
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| A0A5D3E2V7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-67 | 100 | Show/hide |
Query: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Subjt: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Query: VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Subjt: VYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 5.2e-21 | 40.83 | Show/hide |
Query: WSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTEDQVAD
W++K+Q VA S+ EAE++A +ALWL+ +L ++++ + +I DN+ I+I++NP +K+ KH +IK F RE ++ + L Y TE+Q+AD
Subjt: WSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTEDQVAD
Query: ILTKPLPTCKFEFLRSKLGV
I TKPLP +F LR KLG+
Subjt: ILTKPLPTCKFEFLRSKLGV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.6e-20 | 38.17 | Show/hide |
Query: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Y FT S G SW SK Q+ VA ST EAE+IAAT T + +WL++ L +L L QK+ + D+++AI +S N +++ +TKH +++ ++RE+ + +
Subjt: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Query: VYCKTEDQVADILTKPLPTCKFEFLRSKLGV
+ T + AD+LTK +P KFE + +G+
Subjt: VYCKTEDQVADILTKPLPTCKFEFLRSKLGV
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| Q12490 Transposon Ty1-BL Gag-Pol polyprotein | 6.8e-05 | 28.12 | Show/hide |
Query: FTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIA--ISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
+ L+ V S K + ST EAE A + + L ++ +LD ++ + +L D+K+ I+ IS+N + + + F K LR+ + +
Subjt: FTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIA--ISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Query: VYCKTEDQVADILTKPLPTCKFEFLRSK
Y +T+ +AD++TKPLP F+ L +K
Subjt: VYCKTEDQVADILTKPLPTCKFEFLRSK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.0e-17 | 37.4 | Show/hide |
Query: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Y L SWSSKKQ+ V +S+ EAE+ + T+++ W+ +L +L + + I DN A + NPVF+ + KH I F+R +SG + +
Subjt: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Query: VYCKTEDQVADILTKPLPTCKFEFLRSKLGV
V+ T DQ+AD LTKPL F+ SK+GV
Subjt: VYCKTEDQVADILTKPLPTCKFEFLRSKLGV
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.3e-16 | 35.88 | Show/hide |
Query: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Y L SWSSKKQ+ V +S+ EAE+ + T+++ W+ +L +L ++ I DN A + NPVF+ + KH + F+R +SG + +
Subjt: YCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVIL
Query: VYCKTEDQVADILTKPLPTCKFEFLRSKLGV
V+ T DQ+AD LTKPL F+ K+GV
Subjt: VYCKTEDQVADILTKPLPTCKFEFLRSKLGV
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