CuGenDBv2

Gene ID	Pay0014197
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Nuclear transcription factor Y subunit B-3
Genome location	chr11:14088485..14089463
RNA-Seq Expression	Pay0014197
Synteny	Pay0014197
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0060802.1 uncharacterized protein E6C27_scaffold137G00220 [Cucumis melo var. makuwa]

1.3e-88

97.38

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Query:  MSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSP
        MSMLYFSISKRSSLPIQKFVQEQ     EEEEEEEEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSP
Subjt:  MSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSP

Query:  HRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        HRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  HRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

TYK11971.1 uncharacterized protein E5676_scaffold177G001550 [Cucumis melo var. makuwa]

6.1e-86

93.72

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Query:  MSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSP
        MSMLYFSISKRSSLPIQKFVQEQ            EEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSP
Subjt:  MSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSP

Query:  HRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        HRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  HRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

XP_008464163.1 PREDICTED: uncharacterized protein LOC103502111 [Cucumis melo]

2.2e-115

95.08

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Query:  MKLKIKVENQMANTFPLRKPLSWFLVLTFFLRCLGFLGFRFFSSFLFTSIALIMSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELT
        MKLKIKVENQMANTFPLRKPLSWFLVLTFFLRCLGFLGFRFFSSFLFTSIALIMSMLYFSISKRSSLPIQKFVQEQ            EEEEEEDQKELT
Subjt:  MKLKIKVENQMANTFPLRKPLSWFLVLTFFLRCLGFLGFRFFSSFLFTSIALIMSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELT

Query:  FFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQK
        FFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQK
Subjt:  FFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQK

Query:  LSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        LSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  LSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

XP_011656887.2 uncharacterized protein LOC105435780 [Cucumis sativus]

2.7e-102

87.3

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Query:  MKLKIKVENQMANTFPLRKPLSWFLVLTFFLRCLGFLGFRFFSSFLFTSIALIMSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELT
        MKLKIKVENQMANT PLRKP SW +VLTFFL CLGF GFRFFSSFLFTSIALIMSMLYFSISKR+SLPI+KFVQ           EEEEEEEEEDQK+LT
Subjt:  MKLKIKVENQMANTFPLRKPLSWFLVLTFFLRCLGFLGFRFFSSFLFTSIALIMSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELT

Query:  FFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQK
        FFSDHLKSSSASAPT  DLLSESECADDNFTTTEESEVEWPYFDHRF K R+PHRSDDGSISDEESLIEIALPTGHYVSRKFDDV  DEDEDD  FRYQK
Subjt:  FFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQK

Query:  LSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        L+DFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  LSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

XP_038902685.1 uncharacterized protein LOC120089322 [Benincasa hispida]

6.8e-93

84.62

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Query:  MANTFPLRKPLSWFLVLTFFLRCLGFLGFRFFSSFLFTSIALIMSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELTFFSDHLKSSS
        MA T PLR PLSWF+ LTFFL CLGFLGFR FSSFL TSIALIMSMLYFSISKR+SLPIQKFVQ           + +EEEEEEDQK+LTFFSDHLKSSS
Subjt:  MANTFPLRKPLSWFLVLTFFLRCLGFLGFRFFSSFLFTSIALIMSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELTFFSDHLKSSS

Query:  ASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLV
         SAPTT DLLSESECADDNFTTTEESEVEWPYFDHR YK  +P RSDDGSISDEESLIEIALPTGHYVS KFDDVD DEDED   FRYQKLSDFQKKNLV
Subjt:  ASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLV

Query:  EVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        EVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  EVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCP7 Uncharacterized protein

3.6e-76

85.34

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Query:  MSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSP
        MSMLYFSISKR+SLPI+KFVQ              EEEEEEDQK+LTFFSDHLKSSSASAPT  DLLSESECADDNFTTTEESEVEWPYFDHRF K R+P
Subjt:  MSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSP

Query:  HRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        HRSDDGSISDEESLIEIALPTGHYVSRKFDDV  DEDEDD  FRYQKL+DFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  HRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A1S3CMD0 uncharacterized protein LOC103502111

1.0e-115

95.08

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Query:  MKLKIKVENQMANTFPLRKPLSWFLVLTFFLRCLGFLGFRFFSSFLFTSIALIMSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELT
        MKLKIKVENQMANTFPLRKPLSWFLVLTFFLRCLGFLGFRFFSSFLFTSIALIMSMLYFSISKRSSLPIQKFVQEQ            EEEEEEDQKELT
Subjt:  MKLKIKVENQMANTFPLRKPLSWFLVLTFFLRCLGFLGFRFFSSFLFTSIALIMSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELT

Query:  FFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQK
        FFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQK
Subjt:  FFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQK

Query:  LSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        LSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  LSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A5A7UY43 Uncharacterized protein

6.4e-89

97.38

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Query:  MSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSP
        MSMLYFSISKRSSLPIQKFVQEQ     EEEEEEEEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSP
Subjt:  MSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSP

Query:  HRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        HRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  HRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A5D3CJH9 Uncharacterized protein

3.0e-86

93.72

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Query:  MSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSP
        MSMLYFSISKRSSLPIQKFVQEQ            EEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSP
Subjt:  MSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSP

Query:  HRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        HRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  HRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A6J1FUA8 uncharacterized protein LOC111448485

1.5e-69

68.8

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Query:  MKLKIKVENQMANTFPLRKPLSWFLVLTFFLRCLGFLGF-RFFSSFLFTSIALIMSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKEL
        MKLKI  E+QMA   P++ PLS F+VLTFFL  LGFLGF RFFSSF+ T  ALIMSMLYFSISK +  P+ K + +Q+++E               QKEL
Subjt:  MKLKIKVENQMANTFPLRKPLSWFLVLTFFLRCLGFLGF-RFFSSFLFTSIALIMSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKEL

Query:  TFF-SDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRY
        TF  SDH   SSASAPT  DLLSESECADDNFTTTEESEVEWP+FD     A + +RSDDGSISDEESLIEIALPTGHYVS K DD D+D+DEDD  F +
Subjt:  TFF-SDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRY

Query:  QKLSDFQ----KKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        QKLS+FQ    KKNLVE+LAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  QKLSDFQ----KKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G04480.1 unknown protein

1.9e-13

33.77

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Query:  LRKPLSWFLVLTFFLRCLGFLGFRFFSSFLFTSIALIMSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELTFFSDHLKSSSASAPTT
        L++P SW  +L   L  L  LG RF    L T  AL  S  +F IS   S  IQ   Q+Q++E                                    T
Subjt:  LRKPLSWFLVLTFFLRCLGFLGFRFFSSFLFTSIALIMSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELTFFSDHLKSSSASAPTT

Query:  RDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEI
        +D+  +SE   +N   T E +                   DDG+I D+ESLIE++LP+GHY+   ++         +  + + K+ DF+   L ++L EI
Subjt:  RDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEI

Query:  NDINEEENLIEIDISMGSIKYSRFEIEA
        ND  EE+NLIEIDIS+GSIKYSRFEI+A
Subjt:  NDINEEENLIEIDISMGSIKYSRFEIEA

AT5G35870.1 unknown protein

2.1e-07

28.19

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Query:  RKPLSWFLVLTFFLRCLGFLGFRFFSSFLFTSIALIMSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELTFFSDHLKSSSASAPTTR
        ++P+SW   L   L  +  LG   FS  + TS AL  S  +F +S          +Q+   + ++  ++                 D+L  +  S+ TT 
Subjt:  RKPLSWFLVLTFFLRCLGFLGFRFFSSFLFTSIALIMSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELTFFSDHLKSSSASAPTTR

Query:  DLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEIN
        D++  ++                                DDG+I DEESLIE++LP+GHY+   +  +   +D+      Y  + DF+   L+++ AE  
Subjt:  DLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEIN

Query:  DINEEENLIEIDISMGSIKYSRFEIEA
           E++NLIEIDIS+GSIK SRF+I+A
Subjt:  DINEEENLIEIDISMGSIKYSRFEIEA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAGTTGAAAATCAAAGTTGAGAATCAAATGGCCAATACATTTCCTTTGAGAAAACCATTATCATGGTTTCTTGTTCTAACTTTTTTCCTCCGCTGTTTGGGTTTTTT
GGGGTTTAGATTCTTCTCCTCTTTTTTATTTACTTCCATAGCTCTGATTATGTCTATGCTTTATTTCTCAATCTCCAAAAGAAGTTCACTACCTATTCAAAAATTTGTAC
AAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATCAGAAAGAACTGACCTTTTTTTCTGATCACTTGAAATCGTCGTCG
GCGTCAGCTCCAACGACCAGAGACTTGCTGTCGGAAAGTGAATGTGCCGATGATAATTTCACGACCACCGAGGAATCTGAAGTGGAGTGGCCGTACTTTGACCATCGGTT
CTATAAAGCCAGAAGCCCGCATCGGTCTGATGACGGTTCGATTTCCGACGAGGAAAGTTTGATTGAAATCGCTCTCCCGACCGGACATTACGTCAGCCGTAAGTTTGATG
ACGTCGACGAGGACGAGGACGAGGACGACACGCCGTTTCGTTACCAGAAACTGTCGGATTTTCAAAAGAAGAATCTTGTGGAGGTGTTGGCTGAAATTAACGACATCAAT
GAGGAGGAGAATTTGATCGAGATCGACATATCGATGGGCTCCATTAAATATTCAAGGTTCGAAATTGAAGCTTAA

mRNA sequence

Show/hide mRNA sequence

CCCTTTTTTCACATTCTACTCTCTATTCTCATTATACCCATTTCTCCATTTCATCAATTCTTCATAAAGTTTCAACCTTTTTCTTTTCATCTTTCTTGTTTCAACACTTT
CAGACAGTCACAAAAGCTTCACTTTTTTTTTAAGAATACTTTACTAATTTTTTCCTTTTCAAACAATTAATAATAATTACCAACAATTAGCCAATCCCTTCCCCTTTTCC
TTTTTCAGTCTATGAAGTTGAAAATCAAAGTTGAGAATCAAATGGCCAATACATTTCCTTTGAGAAAACCATTATCATGGTTTCTTGTTCTAACTTTTTTCCTCCGCTGT
TTGGGTTTTTTGGGGTTTAGATTCTTCTCCTCTTTTTTATTTACTTCCATAGCTCTGATTATGTCTATGCTTTATTTCTCAATCTCCAAAAGAAGTTCACTACCTATTCA
AAAATTTGTACAAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATCAGAAAGAACTGACCTTTTTTTCTGATCACTTGA
AATCGTCGTCGGCGTCAGCTCCAACGACCAGAGACTTGCTGTCGGAAAGTGAATGTGCCGATGATAATTTCACGACCACCGAGGAATCTGAAGTGGAGTGGCCGTACTTT
GACCATCGGTTCTATAAAGCCAGAAGCCCGCATCGGTCTGATGACGGTTCGATTTCCGACGAGGAAAGTTTGATTGAAATCGCTCTCCCGACCGGACATTACGTCAGCCG
TAAGTTTGATGACGTCGACGAGGACGAGGACGAGGACGACACGCCGTTTCGTTACCAGAAACTGTCGGATTTTCAAAAGAAGAATCTTGTGGAGGTGTTGGCTGAAATTA
ACGACATCAATGAGGAGGAGAATTTGATCGAGATCGACATATCGATGGGCTCCATTAAATATTCAAGGTTCGAAATTGAAGCTTAAAGCAAAAATTAAA

Protein sequence

Show/hide protein sequence

MKLKIKVENQMANTFPLRKPLSWFLVLTFFLRCLGFLGFRFFSSFLFTSIALIMSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEEEEEEDQKELTFFSDHLKSSS
ASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDIN
EEENLIEIDISMGSIKYSRFEIEA

Pay0014197 (gene) of Melon (Payzawat) v1 genome