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Pay0014298 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0014298
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Descriptionras-related protein Rab11C-like
Genome locationchr03:9813787..9820484
RNA-Seq ExpressionPay0014298
SyntenyPay0014298
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052805.1 ras-related protein Rab11C-like isoform X2 [Cucumis melo var. makuwa]1.5e-2379.17Show/hide
Query:  AYGKANREVQAHCPPRGLFEKSRAETAMAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI
        +YGK NREVQ HCPPRGLF+KSRAETAMAHKV+HE DYLFKIV I DS++GKSNILSRFTRNEF L+  S I
Subjt:  AYGKANREVQAHCPPRGLFEKSRAETAMAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI

KAA0059851.1 ras-related protein Rab11C-like [Cucumis melo var. makuwa]5.4e-1887.5Show/hide
Query:  GLFEKSRAETAMAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI
        GLFEKSRAETAMAHKV+HE DYLFKIVPIEDSNIGKSNILSRFTRN+FYL+  S I
Subjt:  GLFEKSRAETAMAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI

XP_008448132.1 PREDICTED: ras-related protein Rab11C-like [Cucumis melo]1.1e-2377.78Show/hide
Query:  AYGKANREVQAHCPPRGLFEKSRAETAMAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI
        +YGK NREVQ HCPPRGLF+KSR ET MAHKV+HE DYLFKIV I DS +GKSNILSRFTRNEFYL+  S I
Subjt:  AYGKANREVQAHCPPRGLFEKSRAETAMAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI

XP_008461753.1 PREDICTED: ras-related protein Rab11C-like isoform X1 [Cucumis melo]1.5e-2379.17Show/hide
Query:  AYGKANREVQAHCPPRGLFEKSRAETAMAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI
        +YGK NREVQ HCPPRGLF+KSRAETAMAHKV+HE DYLFKIV I DS++GKSNILSRFTRNEF L+  S I
Subjt:  AYGKANREVQAHCPPRGLFEKSRAETAMAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI

XP_008461756.1 PREDICTED: ras-related protein Rab11C-like isoform X2 [Cucumis melo]1.5e-2379.17Show/hide
Query:  AYGKANREVQAHCPPRGLFEKSRAETAMAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI
        +YGK NREVQ HCPPRGLF+KSRAETAMAHKV+HE DYLFKIV I DS++GKSNILSRFTRNEF L+  S I
Subjt:  AYGKANREVQAHCPPRGLFEKSRAETAMAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI

TrEMBL top hitse value%identityAlignment
A0A1S3BJ02 ras-related protein Rab11C-like5.4e-2477.78Show/hide
Query:  AYGKANREVQAHCPPRGLFEKSRAETAMAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI
        +YGK NREVQ HCPPRGLF+KSR ET MAHKV+HE DYLFKIV I DS +GKSNILSRFTRNEFYL+  S I
Subjt:  AYGKANREVQAHCPPRGLFEKSRAETAMAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI

A0A1S3CFF6 ras-related protein Rab11C-like isoform X17.1e-2479.17Show/hide
Query:  AYGKANREVQAHCPPRGLFEKSRAETAMAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI
        +YGK NREVQ HCPPRGLF+KSRAETAMAHKV+HE DYLFKIV I DS++GKSNILSRFTRNEF L+  S I
Subjt:  AYGKANREVQAHCPPRGLFEKSRAETAMAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI

A0A1S3CFW6 ras-related protein Rab11C-like isoform X27.1e-2479.17Show/hide
Query:  AYGKANREVQAHCPPRGLFEKSRAETAMAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI
        +YGK NREVQ HCPPRGLF+KSRAETAMAHKV+HE DYLFKIV I DS++GKSNILSRFTRNEF L+  S I
Subjt:  AYGKANREVQAHCPPRGLFEKSRAETAMAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI

A0A5A7UGE0 Ras-related protein Rab11C-like isoform X27.1e-2479.17Show/hide
Query:  AYGKANREVQAHCPPRGLFEKSRAETAMAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI
        +YGK NREVQ HCPPRGLF+KSRAETAMAHKV+HE DYLFKIV I DS++GKSNILSRFTRNEF L+  S I
Subjt:  AYGKANREVQAHCPPRGLFEKSRAETAMAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI

A0A5A7V285 Ras-related protein Rab11C-like2.6e-1887.5Show/hide
Query:  GLFEKSRAETAMAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI
        GLFEKSRAETAMAHKV+HE DYLFKIVPIEDSNIGKSNILSRFTRN+FYL+  S I
Subjt:  GLFEKSRAETAMAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI

SwissProt top hitse value%identityAlignment
Q39434 Ras-related protein Rab2BV2.5e-1057.58Show/hide
Query:  MAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI------RGQDVKG--VKVDTW
        MA++V+HE DYLFKIV I DS +GKSNILSRFTRNEF L+  S I      R   V+G  VK   W
Subjt:  MAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI------RGQDVKG--VKVDTW

Q40193 Ras-related protein Rab11C3.9e-1159.09Show/hide
Query:  MAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI------RGQDVKG--VKVDTW
        MAH+V+HE DYLFKIV I DS +GKSNILSRFTRNEF L+  S I      R   V+G  VK   W
Subjt:  MAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI------RGQDVKG--VKVDTW

Q40523 Ras-related protein Rab11A5.6e-1056.06Show/hide
Query:  MAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI------RGQDVKG--VKVDTW
        MA++V+HE DYLFK+V I DS +GKSNILSRFTRNEF L+  S I      R   V+G  VK   W
Subjt:  MAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI------RGQDVKG--VKVDTW

Q96283 Ras-related protein RABA2c9.5e-1054.55Show/hide
Query:  MAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI------RGQDVKG--VKVDTW
        M H+V+ E DYLFKIV I DS +GKSNILSRFTRNEF L+  S I      R   V+G  +K   W
Subjt:  MAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI------RGQDVKG--VKVDTW

Q9LNW1 Ras-related protein RABA2b3.3e-1056.06Show/hide
Query:  MAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI------RGQDVKG--VKVDTW
        MA++++HE DYLFKIV I DS +GKSNILSRFTRNEF L+  S I      R   V+G  VK   W
Subjt:  MAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI------RGQDVKG--VKVDTW

Arabidopsis top hitse value%identityAlignment
AT1G07410.1 RAB GTPase homolog A2B2.3e-1156.06Show/hide
Query:  MAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI------RGQDVKG--VKVDTW
        MA++++HE DYLFKIV I DS +GKSNILSRFTRNEF L+  S I      R   V+G  VK   W
Subjt:  MAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI------RGQDVKG--VKVDTW

AT1G09630.1 RAB GTPase 11C2.2e-0951.52Show/hide
Query:  MAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI------RGQDVKG--VKVDTW
        MA + + E DYLFK+V I DS +GKSN+LSRFTRNEF L+  S I      R   V+G  VK   W
Subjt:  MAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI------RGQDVKG--VKVDTW

AT3G46830.1 RAB GTPase homolog A2C6.8e-1154.55Show/hide
Query:  MAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI------RGQDVKG--VKVDTW
        M H+V+ E DYLFKIV I DS +GKSNILSRFTRNEF L+  S I      R   V+G  +K   W
Subjt:  MAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI------RGQDVKG--VKVDTW

AT5G59150.1 RAB GTPase homolog A2D1.5e-1054.55Show/hide
Query:  MAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI------RGQDVKG--VKVDTW
        MAH+V  + DYLFKIV I DS +GK+NILSRFTRNEF L+  S I      R   V+G  VK   W
Subjt:  MAHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAI------RGQDVKG--VKVDTW

AT5G60860.1 RAB GTPase homolog A1F4.9e-0949.23Show/hide
Query:  AHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAIRGQ--------DVKGVKVDTW
        A++ + E DYLFK+V I DS +GKSN+LSRFTRNEF L+  S I  +        D K VK   W
Subjt:  AHKVNHENDYLFKIVPIEDSNIGKSNILSRFTRNEFYLDQGSAIRGQ--------DVKGVKVDTW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGACACTTGAGGAAGATTTACCAATAACATTTGTGCTGAATTTTAGCTACGGCTACTCGGGATATATAGAGCTTCTTCTGGTAATGTTTGAATTGGATATATTTGT
AAAGTCTGTTAATGTAACATCCAAGAGGGTTGAAGACTTGTTAGGAAAAACCATGGTATATTACTACATGTTTCAAGAAATGAAACAAATTTTTGCTTATGGCAAAGCAA
ATAGAGAAGTTCAAGCGCACTGCCCACCAAGAGGTTTGTTCGAGAAATCTAGGGCAGAGACTGCTATGGCTCATAAGGTAAACCACGAGAATGACTATTTGTTCAAGATT
GTTCCGATTGAGGATTCCAACATTGGGAAGTCCAACATTCTTTCAAGATTTACTAGAAACGAGTTCTACTTGGACCAAGGATCGGCGATTAGAGGCCAAGATGTCAAGGG
TGTGAAAGTAGACACATGGGGGTATGTAGACGCAAGATCATTCGTTTTAAGTGTGGACAAGCTGGACATTACCAAGATGAATGTTCATAAGGAACCAGGGTTAGGCATTT
GA
mRNA sequenceShow/hide mRNA sequence
ATGAGGACACTTGAGGAAGATTTACCAATAACATTTGTGCTGAATTTTAGCTACGGCTACTCGGGATATATAGAGCTTCTTCTGGTAATGTTTGAATTGGATATATTTGT
AAAGTCTGTTAATGTAACATCCAAGAGGGTTGAAGACTTGTTAGGAAAAACCATGGTATATTACTACATGTTTCAAGAAATGAAACAAATTTTTGCTTATGGCAAAGCAA
ATAGAGAAGTTCAAGCGCACTGCCCACCAAGAGGTTTGTTCGAGAAATCTAGGGCAGAGACTGCTATGGCTCATAAGGTAAACCACGAGAATGACTATTTGTTCAAGATT
GTTCCGATTGAGGATTCCAACATTGGGAAGTCCAACATTCTTTCAAGATTTACTAGAAACGAGTTCTACTTGGACCAAGGATCGGCGATTAGAGGCCAAGATGTCAAGGG
TGTGAAAGTAGACACATGGGGGTATGTAGACGCAAGATCATTCGTTTTAAGTGTGGACAAGCTGGACATTACCAAGATGAATGTTCATAAGGAACCAGGGTTAGGCATTT
GA
Protein sequenceShow/hide protein sequence
MRTLEEDLPITFVLNFSYGYSGYIELLLVMFELDIFVKSVNVTSKRVEDLLGKTMVYYYMFQEMKQIFAYGKANREVQAHCPPRGLFEKSRAETAMAHKVNHENDYLFKI
VPIEDSNIGKSNILSRFTRNEFYLDQGSAIRGQDVKGVKVDTWGYVDARSFVLSVDKLDITKMNVHKEPGLGI