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Pay0014315 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0014315
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase
Genome locationchr02:8503797..8504351
RNA-Seq ExpressionPay0014315
SyntenyPay0014315
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040217.1 pol protein [Cucumis melo var. makuwa]6.7e-9399.45Show/hide
Query:  AGVVDLLYVEMRLGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGSV
        A VVDLLYVEMRLGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGSV
Subjt:  AGVVDLLYVEMRLGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGSV

Query:  ACRLALPPSFSTVYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELKRLHG
        ACRLALPPSFSTVYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELKRLHG
Subjt:  ACRLALPPSFSTVYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELKRLHG

KAA0045265.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]8.5e-6480.84Show/hide
Query:  LGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGSVACRLALPPSFST
        +GEQ MLGP+L   T AAIQKIRARM T QSKQKSYADERRKDL+F VGDMVFLKV PMKGVLRF+KKGKLSP FV  F+ILERIGSVA  LALPPSFS 
Subjt:  LGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGSVACRLALPPSFST

Query:  VYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELK
        V+DVFHVSMLR+YVA+LTHVVDF+PLQINENMS++EQPVEILAREVKMLRNR I LVKVL RNH+++
Subjt:  VYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELK

TYK07879.1 pol protein [Cucumis melo var. makuwa]1.2e-6579.23Show/hide
Query:  AGVVDLLYVEMRLGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGSV
        A VVDLLYVEMRLGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADER                                    +SFKILERIGSV
Subjt:  AGVVDLLYVEMRLGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGSV

Query:  ACRLALPPSFSTVYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELKRLHG
        ACRLALPPSFSTVYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELKRLHG
Subjt:  ACRLALPPSFSTVYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELKRLHG

TYK29789.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.6e-6281.1Show/hide
Query:  LGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGSVACRLALPPSFST
        +GEQ MLGP+L   T  AIQKIRARMLTAQS+QKSYADERRKDL+F VGDMVFLKV PMKG LRFEKKGKLSP FV  F+ILERIG VA RLALPPSFS 
Subjt:  LGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGSVACRLALPPSFST

Query:  VYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNH
        V+DVFHVSMLR+YVA+ THVV FEPLQINE++S+EEQPVEILAREVKMLRNR I LVKVL RNH
Subjt:  VYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNH

XP_008450467.1 PREDICTED: uncharacterized protein LOC103492060 [Cucumis melo]1.6e-94100Show/hide
Query:  MAGVVDLLYVEMRLGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGS
        MAGVVDLLYVEMRLGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGS
Subjt:  MAGVVDLLYVEMRLGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGS

Query:  VACRLALPPSFSTVYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELKRLHG
        VACRLALPPSFSTVYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELKRLHG
Subjt:  VACRLALPPSFSTVYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELKRLHG

TrEMBL top hitse value%identityAlignment
A0A1S3BPB9 uncharacterized protein LOC1034920607.7e-95100Show/hide
Query:  MAGVVDLLYVEMRLGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGS
        MAGVVDLLYVEMRLGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGS
Subjt:  MAGVVDLLYVEMRLGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGS

Query:  VACRLALPPSFSTVYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELKRLHG
        VACRLALPPSFSTVYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELKRLHG
Subjt:  VACRLALPPSFSTVYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELKRLHG

A0A5A7TF93 Pol protein3.2e-9399.45Show/hide
Query:  AGVVDLLYVEMRLGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGSV
        A VVDLLYVEMRLGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGSV
Subjt:  AGVVDLLYVEMRLGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGSV

Query:  ACRLALPPSFSTVYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELKRLHG
        ACRLALPPSFSTVYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELKRLHG
Subjt:  ACRLALPPSFSTVYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELKRLHG

A0A5A7TV58 Reverse transcriptase4.1e-6480.84Show/hide
Query:  LGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGSVACRLALPPSFST
        +GEQ MLGP+L   T AAIQKIRARM T QSKQKSYADERRKDL+F VGDMVFLKV PMKGVLRF+KKGKLSP FV  F+ILERIGSVA  LALPPSFS 
Subjt:  LGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGSVACRLALPPSFST

Query:  VYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELK
        V+DVFHVSMLR+YVA+LTHVVDF+PLQINENMS++EQPVEILAREVKMLRNR I LVKVL RNH+++
Subjt:  VYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELK

A0A5D3CC37 Pol protein5.7e-6679.23Show/hide
Query:  AGVVDLLYVEMRLGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGSV
        A VVDLLYVEMRLGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADER                                    +SFKILERIGSV
Subjt:  AGVVDLLYVEMRLGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGSV

Query:  ACRLALPPSFSTVYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELKRLHG
        ACRLALPPSFSTVYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELKRLHG
Subjt:  ACRLALPPSFSTVYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELKRLHG

A0A5D3E202 Ty3-gypsy retrotransposon protein1.7e-6281.1Show/hide
Query:  LGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGSVACRLALPPSFST
        +GEQ MLGP+L   T  AIQKIRARMLTAQS+QKSYADERRKDL+F VGDMVFLKV PMKG LRFEKKGKLSP FV  F+ILERIG VA RLALPPSFS 
Subjt:  LGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGSVACRLALPPSFST

Query:  VYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNH
        V+DVFHVSMLR+YVA+ THVV FEPLQINE++S+EEQPVEILAREVKMLRNR I LVKVL RNH
Subjt:  VYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGTGTTGTAGATCTCTTATATGTTGAGATGAGGTTGGGTGAGCAAATAATGTTAGGCCCTAAGTTAGGTCATATCACAATTGCAGCCATACAAAAGATTAGAGC
TCGTATGTTGACAGCGCAGAGCAAACAGAAGAGTTATGCTGATGAACGACGTAAGGATCTAAAGTTTGTTGTGGGAGACATGGTTTTTCTAAAGGTAACACCTATGAAGG
GTGTTTTGAGGTTCGAGAAGAAGGGGAAGTTAAGTCCATGTTTTGTAGAGTCATTTAAGATACTTGAGCGAATTGGCTCTGTAGCATGTCGTTTGGCGTTGCCTCCATCG
TTTTCTACAGTTTATGATGTGTTCCACGTCTCTATGCTGAGGAAGTATGTGGCAAATCTGACACATGTAGTTGACTTTGAACCATTGCAGATTAATGAGAACATGAGTTT
TGAGGAGCAACCCGTTGAGATTTTGGCAAGAGAGGTCAAGATGCTTCGCAATAGAAGAATTGTGCTGGTCAAAGTTCTTTGTCGAAACCACGAGTTGAAGAGGCTACATG
GGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGGTGTTGTAGATCTCTTATATGTTGAGATGAGGTTGGGTGAGCAAATAATGTTAGGCCCTAAGTTAGGTCATATCACAATTGCAGCCATACAAAAGATTAGAGC
TCGTATGTTGACAGCGCAGAGCAAACAGAAGAGTTATGCTGATGAACGACGTAAGGATCTAAAGTTTGTTGTGGGAGACATGGTTTTTCTAAAGGTAACACCTATGAAGG
GTGTTTTGAGGTTCGAGAAGAAGGGGAAGTTAAGTCCATGTTTTGTAGAGTCATTTAAGATACTTGAGCGAATTGGCTCTGTAGCATGTCGTTTGGCGTTGCCTCCATCG
TTTTCTACAGTTTATGATGTGTTCCACGTCTCTATGCTGAGGAAGTATGTGGCAAATCTGACACATGTAGTTGACTTTGAACCATTGCAGATTAATGAGAACATGAGTTT
TGAGGAGCAACCCGTTGAGATTTTGGCAAGAGAGGTCAAGATGCTTCGCAATAGAAGAATTGTGCTGGTCAAAGTTCTTTGTCGAAACCACGAGTTGAAGAGGCTACATG
GGTGA
Protein sequenceShow/hide protein sequence
MAGVVDLLYVEMRLGEQIMLGPKLGHITIAAIQKIRARMLTAQSKQKSYADERRKDLKFVVGDMVFLKVTPMKGVLRFEKKGKLSPCFVESFKILERIGSVACRLALPPS
FSTVYDVFHVSMLRKYVANLTHVVDFEPLQINENMSFEEQPVEILAREVKMLRNRRIVLVKVLCRNHELKRLHG