; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0014355 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0014355
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr06:30562448..30565795
RNA-Seq ExpressionPay0014355
SyntenyPay0014355
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR001878 - Zinc finger, CCHC-type
IPR012337 - Ribonuclease H-like superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR025724 - GAG-pre-integrase domain
IPR036397 - Ribonuclease H superfamily
IPR036875 - Zinc finger, CCHC-type superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW22809.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]0.0e+0058.46Show/hide
Query:  VPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSLE
        VP++ V+ GEKPEKF G++F RWQQKMLFYLTTLNLA+FL EDAP L E E D +   A+DAWKH+++LC+NY++NGL ++L NVYS   +AK LW SL+
Subjt:  VPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSLE

Query:  KKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKVE
        +KYKTE AG KKF+VG+FLDYKMV+SKTV+SQVQE+QVILH+IHAE M LSE+FQVA+IIEKLPP+WKDFKNYLKHKRKE+ +E+L++RL IEE+NR+ E
Subjt:  KKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKVE

Query:  KCIVDSTVDPKANIVE----NKPHTNKKRKLSDECS-----NKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLCA
        K    +  + KAN VE    +K  TN  +    +       +KKP    KF GKCFNC K  H+S DCR PK  + K A      +D+++ +V DIDL A
Subjt:  KCIVDSTVDPKANIVE----NKPHTNKKRKLSDECS-----NKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLCA

Query:  VISECNMVG-NSKEWWVDTDATRHIFS------------NGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLVF
        V+SE N+VG N KEWW+DT ATRH+ S            NGE++FMGNS+TS+++GQGKVILKMTSGKELTL NVL+VP++ KNLVSGSLL+ +GF+LVF
Subjt:  VISECNMVG-NSKEWWVDTDATRHIFS------------NGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLVF

Query:  VSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESF-VWHGRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVC-----------
         S+K VL K+ MY+GKGY+SD ++KLNV+T++    N NK ST  Y++ES  +WHGRLGHVN+++L RLIN+N IP F  ++NH+CE C           
Subjt:  VSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESF-VWHGRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVC-----------

Query:  ---RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG------------EHGIIHQT
           R T+PL LIH+DICDLKFVQTRGG KYFITF+DD T+YCYVYLLKSKDEA+E F LYK EVENQL+ KIK +RSDRG            +HGIIH+T
Subjt:  ---RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG------------EHGIIHQT

Query:  TAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPHKK------------KPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVDC
        TAPYSPQSNG+A+RKNRTLKEMMNAMLISS LPQN+W EA+LTANYLLN++P KK            KPSY +L++WGCLAKVA+P PK VKIGPKT+DC
Subjt:  TAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPHKK------------KPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVDC

Query:  IFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMACKARLQKRSFDVITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLK
        IFIGY  NS AYRFLV++S++ DIH  TIMESRN +FFE++FP K   +    KR F+   S+ QN        + E RRSKR+R  KSFGPDF+T++L+
Subjt:  IFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMACKARLQKRSFDVITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLK

Query:  NEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNNTWDLVDLPLGSTPL-----------------------------------------------------
         EPQTFKEA++S E   WKEA+ SEI+SI+ N+TW+LVDLP G  PL                                                     
Subjt:  NEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNNTWDLVDLPLGSTPL-----------------------------------------------------

Query:  ---ALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLYV
           AL   EIHQMDVKT FLNG+LDEEIYM+QP+GF +P QEKKVCKL++SLYGLKQAPKQWHE FDN M+++GFKINECDKCVYVK  ++ +VIVCLYV
Subjt:  ---ALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLYV

Query:  DDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGSL
        DDMLI+GS+  +I +TK ML ++F+MKDMG+ADVILGIKI +T   L+LSQSHY D IL K+ K +  +A+TP+D +LHL KN G+S++Q+EYSRIIGSL
Subjt:  DDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGSL

Query:  MSLLS
        M L+S
Subjt:  MSLLS

RVW68266.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]0.0e+0058.5Show/hide
Query:  SVPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSL
        +VP++ V+ GEKPEKF G++F RWQQKMLFYLTTLNLA+FL EDAP L E E D +   A+DAWKH+++LC+NY++NGL ++L NVYS   +AK LW SL
Subjt:  SVPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSL

Query:  EKKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKV
        ++KYKTE AG KKF+VG+FLDYKMV+SKTV+SQVQE+QVILH+IH E M LSE+FQVA+IIEKLPP+WKDFKNYLKHKRKE+ +E+L++RL IEE+NR+ 
Subjt:  EKKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKV

Query:  EKCIVDSTVDPKANIVE----NKPHTNKKRKLSDECS-----NKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLC
        EK    +  + KAN VE    +K  TN  +    +       +KKP    KF GKCFNC K  H+S DCR PK  + K A      +D+++ +V DIDL 
Subjt:  EKCIVDSTVDPKANIVE----NKPHTNKKRKLSDECS-----NKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLC

Query:  AVISECNMVG-NSKEWWVDTDATRHIFS------------NGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLV
        AV+SE N+VG N KEWW+DT ATRH+ S            NGE++FMGNS+TS+++GQGKVILKMTSGKELTL NVL+VP++ KNLVSGSLL+ +GF+LV
Subjt:  AVISECNMVG-NSKEWWVDTDATRHIFS------------NGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLV

Query:  FVSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESF-VWHGRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVC----------
        F S+K VL K+ MY+GKGY+SD ++KLNV+T++    N NK ST  Y++ES  +WHGRLGHVN+++L RLIN+N IP F  ++NH+CE C          
Subjt:  FVSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESF-VWHGRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVC----------

Query:  ----RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG------------EHGIIHQ
            R T+PL LIH+DICDLKFVQTRGG KYFITF+DD T+YCYVYLLKSKDEA+E F LYK EVENQL+ KIK +RSDRG            +HGIIH+
Subjt:  ----RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG------------EHGIIHQ

Query:  TTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPHKK------------KPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVD
        TTAPYSPQSNG+A+RKNRTLKEMMNAMLISS LPQN+W EA+LTANYLLN++P KK            KPSY +L++WGCLAKVAVP PK VKIGPKT+D
Subjt:  TTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPHKK------------KPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVD

Query:  CIFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMACKARLQKRSFDVITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLL
        C FIGY  NS AYRFLV++S++ DIH NTIMESRN +FFE++FP K   +    KR F+   S+ QN        + E RRSKR+R  KSFGPDF+T++L
Subjt:  CIFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMACKARLQKRSFDVITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLL

Query:  KNEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNNTWDLVDLPLGSTPL----------------------------------------------------
        + EPQTFKEA++S E   WKEA+ SEI+SI+ N+TW+LVDLP G  PL                                                    
Subjt:  KNEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNNTWDLVDLPLGSTPL----------------------------------------------------

Query:  ----ALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLY
            AL   EIHQMDVKT FLNG+LDEEIYM+QP+GF +P QEKKVCKL++SLYGLKQAPKQWHEKFDN M+++GFKINECDKCVYVK  ++ +VIVCLY
Subjt:  ----ALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLY

Query:  VDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGS
        VDDMLI+GS+  +I +TK ML ++F+MKDMG+ADVILGIKI +T   L+LSQSHY D IL K+ K +  +A+TP+D +LHL KN G+S++Q+EYSRIIGS
Subjt:  VDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGS

Query:  LMSLLS
        LM L+S
Subjt:  LMSLLS

RVW92065.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]0.0e+0058.5Show/hide
Query:  SVPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSL
        +VP++ V+ GEKPEKF G++F RWQQKMLFYLTTLNLA+FL EDAP L E E D +   A+DAWKH+++LC+NY++NGL ++L NVYS   +AK LW SL
Subjt:  SVPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSL

Query:  EKKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKV
        ++KYKTE AG KKF+VG FLDYKMV+SKTV+SQVQE+QVILH+IHAE M LSE+FQVA+IIEKLPP+WKDFKNYLKHKRKE+ +E+L++RL IEE+NR+ 
Subjt:  EKKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKV

Query:  EKCIVDSTVDPKANIVE----NKPHTNKKRKLSDECS-----NKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLC
        EK    +  + KAN VE    +K  TN  +    +       +KKP    KF GKCFNC K  H+S DCR PK  + K A      +D+++ +V DIDL 
Subjt:  EKCIVDSTVDPKANIVE----NKPHTNKKRKLSDECS-----NKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLC

Query:  AVISECNMVG-NSKEWWVDTDATRHIFS------------NGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLV
        AV+SE N+VG N KEWW+DT ATRH+ S            NG ++FMGNS+TS+++GQGKVILKMTSGKELTL NVL+VP++ KNLVSGSLL+ +GF+LV
Subjt:  AVISECNMVG-NSKEWWVDTDATRHIFS------------NGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLV

Query:  FVSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESF-VWHGRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVC----------
        F S+K VL K+ MY+GKGY+SD ++KLNV+T++    N NK ST  Y++ES  +WHGRLGHVN+++L RLIN+N IP F  ++NH+CE C          
Subjt:  FVSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESF-VWHGRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVC----------

Query:  ----RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG------------EHGIIHQ
            R T+PL LIH+DICDLKFVQTRGG KYFITF+DD T+YCYVYLLKSKDEA+E F LYK EVENQL+ KIK +RSDRG            +HGIIH+
Subjt:  ----RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG------------EHGIIHQ

Query:  TTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPHKK------------KPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVD
        TTAPYSPQSNG+A+RKNRTLKEMMNAMLISS LPQN+W EA+LTANYLLN++P KK            KPSY +L++WGCLAKVAVP PK VKIGPKT+D
Subjt:  TTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPHKK------------KPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVD

Query:  CIFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMACKARLQKRSFDVITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLL
        CIFIGY  NS AYRFLV++S++ DIH NTIMESRN +FFE++FP K   +    KR   ++ S+ QN        + E RRSKR+R  KSFGPDF+T++L
Subjt:  CIFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMACKARLQKRSFDVITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLL

Query:  KNEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNNTWDLVDLPLGSTPL----------------------------------------------------
        + EPQTFKEA++S E   WKEA+ SEI+SI+ N+TW+LVDLP G  PL                                                    
Subjt:  KNEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNNTWDLVDLPLGSTPL----------------------------------------------------

Query:  ----ALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLY
            AL   EIHQMDVKT FLNG+LDEEIYM+QP+GF +P QEKKVCKL++SLYGLKQAPKQWHEKFDN M+++GFKINECDKCVYVK  ++ +VIVCLY
Subjt:  ----ALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLY

Query:  VDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGS
        VDDMLI+GS+  +I +TK ML ++F+MKDMG+ADVILGIKI +T   L+LSQSHY D IL K+ K +  +A+TP+D +LHL KN G+S++Q+EYSRIIGS
Subjt:  VDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGS

Query:  LMSLLS
        LM L+S
Subjt:  LMSLLS

RVX14679.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]0.0e+0058.59Show/hide
Query:  SVPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSL
        +VP++ V+ GEKPEKF G++F RWQQKMLFYLTTLNLA+FL EDAP L E E D +   A+DAWKH+++LC+NY++NGL ++L NVYS   +AK LW SL
Subjt:  SVPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSL

Query:  EKKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKV
        ++KYKTE AG KKF+VG+FLDYKMV+SKTV+SQVQE+QVILH+IHAE M LSE+FQVA+IIEKLPP+WKDFKNYLKHKRKE+ +E+L++RL IEE+NR+ 
Subjt:  EKKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKV

Query:  EKCIVDSTVDPKANIVE----NKPHTNKKRKLSDECS-----NKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLC
        EK    +  + KAN VE    +K  TN  +    +       +KKP    KF GKCFNC K  H+S DCR PK  + K A      +D+++ +V DIDL 
Subjt:  EKCIVDSTVDPKANIVE----NKPHTNKKRKLSDECS-----NKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLC

Query:  AVISECNMVG-NSKEWWVDTDATRHIFS------------NGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLV
        AV+SE N+VG N KEWW+DT ATRH+ S            NGE++FMGNS+TS+++GQGKVILKMTSGKELTL NVL+VP++ KNLVSGSLL+ +GF+LV
Subjt:  AVISECNMVG-NSKEWWVDTDATRHIFS------------NGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLV

Query:  FVSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESF-VWHGRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVC----------
        F S+K VL K+ MY+GKGY+SD ++KLNV+T++    N NK ST  Y++ES  +WHGRLGHVN+++L RLIN+N IP F  ++NH+CE C          
Subjt:  FVSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESF-VWHGRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVC----------

Query:  ----RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG------------EHGIIHQ
            R T+PL LIH+DICDLKFVQTRGG KYFITF+DD T+YCYVYLLKSKDEA+E F LYK EVENQL+ KIK +RSDRG            +HGIIH+
Subjt:  ----RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG------------EHGIIHQ

Query:  TTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPHKK------------KPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVD
        TTAPYSPQSNG+A+RKNRTLKEMMNAMLISS LPQN+W EA+LTANYLLN++P KK            KPSY +L++WGCLAKVAVP PK VKIGPKT+D
Subjt:  TTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPHKK------------KPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVD

Query:  CIFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMACKARLQKRSFDVITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLL
        CIFIGY  NS AYRFLV++S++ DIH NTIMESRN +FFE++FP K   +    KR   ++ S+ QN        + E RRSKR+R  KSFGPDF+T++L
Subjt:  CIFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMACKARLQKRSFDVITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLL

Query:  KNEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNNTWDLVDLPLGSTPL----------------------------------------------------
        + EPQTFKEA++S E   WKEA+ SEI+SI+ N+TW+LVDLP G  PL                                                    
Subjt:  KNEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNNTWDLVDLPLGSTPL----------------------------------------------------

Query:  ----ALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLY
            AL   EIHQMDVKT FLNG+LDEEIYM+QP+GF +P QEKKVCKL++SLYGLKQAPKQWHEKFDN M+++GFKINECDKCVYVK  ++ +VIVCLY
Subjt:  ----ALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLY

Query:  VDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGS
        VDDMLI+GS+  +I +TK ML ++F+MKDMG+ADVILGIKI +T   L+LSQSHY D IL K+ K +  +A+TP+D +LHL KN G+S++Q+EYSRIIGS
Subjt:  VDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGS

Query:  LMSLLS
        LM L+S
Subjt:  LMSLLS

RVX15136.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]0.0e+0058.68Show/hide
Query:  SVPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSL
        +VP++ V+ GEKPEKF G++F RWQQKMLFYLTTLNLA+FL EDAP L E E D +   A+DAWKH+++LC+NY++NGL ++L NVYS   +AK LW SL
Subjt:  SVPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSL

Query:  EKKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKV
        ++KYKTE  G KKF+VG+FLDYKMV+SKTV+SQVQE+QVILH+IHAE M LSE+FQVA+IIEKLPP+WKDFKNYLKHKRKE+ +E+L++RL IEE+NR+ 
Subjt:  EKKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKV

Query:  EKCIVDSTVDPKANIVEN------KPHTNKKR--KLSDECS-NKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLC
        EK    +  + KAN VE+      K + NK +  KL  +   +KKP    KF GKCFNC K  H+S DCR PK  + K A      +D+++ +V DIDL 
Subjt:  EKCIVDSTVDPKANIVEN------KPHTNKKR--KLSDECS-NKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLC

Query:  AVISECNMVG-NSKEWWVDTDATRHIFS------------NGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLV
        AV+SE N+VG N KEWW+DT ATRH+ S            NGE++FMGNS+TS+++GQGKVILKMTSGKELTL NVL+VP++ KNLVSGSLL+ +GF+LV
Subjt:  AVISECNMVG-NSKEWWVDTDATRHIFS------------NGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLV

Query:  FVSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESF-VWHGRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVC----------
        F S+K VL K+ MY+GKGY+SD ++KLNV+T++    N NK ST  Y++ES  +WHGRLGHVN+++L RLIN+N IP F  ++NH+CE C          
Subjt:  FVSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESF-VWHGRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVC----------

Query:  ----RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG------------EHGIIHQ
            R T+PL LIH+DICDLKFVQTRGG KYFITF+DD T+YCYVYLLKSKDEA+E F LYK EVENQL+ KIK +RSDRG            +HGIIH+
Subjt:  ----RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG------------EHGIIHQ

Query:  TTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPHKK------------KPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVD
        TTAPYSPQSNG+A+RKNRTLKEMMNAMLISS LPQN+W EA+LTANYLLN++P KK            KPSY +L++WGCLAKVAVP PK VKIGPKT+D
Subjt:  TTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPHKK------------KPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVD

Query:  CIFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMACKARLQKRSFDVITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLL
        CIFIGY  NS AYRFLV++S++ DIH NTIMESRN +FFE++FP K   +    KR   ++ S+ QN        + E RRSKR+R  KSFGPDF+T++L
Subjt:  CIFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMACKARLQKRSFDVITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLL

Query:  KNEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNNTWDLVDLPLGSTPL----------------------------------------------------
        ++EPQTFKEA++S E+  WKEA+ SEI+SI+ N+TW+LVDLP G  PL                                                    
Subjt:  KNEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNNTWDLVDLPLGSTPL----------------------------------------------------

Query:  ----ALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLY
            AL   EIHQMDVKT FLNG+LDEEIYM+QP+GF +P QEKKVCKL++SLYGLKQAPKQWHEKFDN M+++GFKINECDKCVYVK  ++ +VIVCLY
Subjt:  ----ALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLY

Query:  VDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGS
        VDDMLI+GS+  +I +TK ML ++F+MKDMG+ADVILGIKI +T   L+LSQSHY D IL K+ K +  +A+TP+D +LHL KN G+S++Q+EYSRIIGS
Subjt:  VDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGS

Query:  LMSLLS
        LM L+S
Subjt:  LMSLLS

TrEMBL top hitse value%identityAlignment
A0A438CI20 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0058.46Show/hide
Query:  VPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSLE
        VP++ V+ GEKPEKF G++F RWQQKMLFYLTTLNLA+FL EDAP L E E D +   A+DAWKH+++LC+NY++NGL ++L NVYS   +AK LW SL+
Subjt:  VPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSLE

Query:  KKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKVE
        +KYKTE AG KKF+VG+FLDYKMV+SKTV+SQVQE+QVILH+IHAE M LSE+FQVA+IIEKLPP+WKDFKNYLKHKRKE+ +E+L++RL IEE+NR+ E
Subjt:  KKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKVE

Query:  KCIVDSTVDPKANIVE----NKPHTNKKRKLSDECS-----NKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLCA
        K    +  + KAN VE    +K  TN  +    +       +KKP    KF GKCFNC K  H+S DCR PK  + K A      +D+++ +V DIDL A
Subjt:  KCIVDSTVDPKANIVE----NKPHTNKKRKLSDECS-----NKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLCA

Query:  VISECNMVG-NSKEWWVDTDATRHIFS------------NGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLVF
        V+SE N+VG N KEWW+DT ATRH+ S            NGE++FMGNS+TS+++GQGKVILKMTSGKELTL NVL+VP++ KNLVSGSLL+ +GF+LVF
Subjt:  VISECNMVG-NSKEWWVDTDATRHIFS------------NGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLVF

Query:  VSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESF-VWHGRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVC-----------
         S+K VL K+ MY+GKGY+SD ++KLNV+T++    N NK ST  Y++ES  +WHGRLGHVN+++L RLIN+N IP F  ++NH+CE C           
Subjt:  VSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESF-VWHGRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVC-----------

Query:  ---RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG------------EHGIIHQT
           R T+PL LIH+DICDLKFVQTRGG KYFITF+DD T+YCYVYLLKSKDEA+E F LYK EVENQL+ KIK +RSDRG            +HGIIH+T
Subjt:  ---RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG------------EHGIIHQT

Query:  TAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPHKK------------KPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVDC
        TAPYSPQSNG+A+RKNRTLKEMMNAMLISS LPQN+W EA+LTANYLLN++P KK            KPSY +L++WGCLAKVA+P PK VKIGPKT+DC
Subjt:  TAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPHKK------------KPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVDC

Query:  IFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMACKARLQKRSFDVITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLK
        IFIGY  NS AYRFLV++S++ DIH  TIMESRN +FFE++FP K   +    KR F+   S+ QN        + E RRSKR+R  KSFGPDF+T++L+
Subjt:  IFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMACKARLQKRSFDVITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLK

Query:  NEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNNTWDLVDLPLGSTPL-----------------------------------------------------
         EPQTFKEA++S E   WKEA+ SEI+SI+ N+TW+LVDLP G  PL                                                     
Subjt:  NEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNNTWDLVDLPLGSTPL-----------------------------------------------------

Query:  ---ALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLYV
           AL   EIHQMDVKT FLNG+LDEEIYM+QP+GF +P QEKKVCKL++SLYGLKQAPKQWHE FDN M+++GFKINECDKCVYVK  ++ +VIVCLYV
Subjt:  ---ALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLYV

Query:  DDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGSL
        DDMLI+GS+  +I +TK ML ++F+MKDMG+ADVILGIKI +T   L+LSQSHY D IL K+ K +  +A+TP+D +LHL KN G+S++Q+EYSRIIGSL
Subjt:  DDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGSL

Query:  MSLLS
        M L+S
Subjt:  MSLLS

A0A438G7T4 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0058.5Show/hide
Query:  SVPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSL
        +VP++ V+ GEKPEKF G++F RWQQKMLFYLTTLNLA+FL EDAP L E E D +   A+DAWKH+++LC+NY++NGL ++L NVYS   +AK LW SL
Subjt:  SVPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSL

Query:  EKKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKV
        ++KYKTE AG KKF+VG+FLDYKMV+SKTV+SQVQE+QVILH+IH E M LSE+FQVA+IIEKLPP+WKDFKNYLKHKRKE+ +E+L++RL IEE+NR+ 
Subjt:  EKKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKV

Query:  EKCIVDSTVDPKANIVE----NKPHTNKKRKLSDECS-----NKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLC
        EK    +  + KAN VE    +K  TN  +    +       +KKP    KF GKCFNC K  H+S DCR PK  + K A      +D+++ +V DIDL 
Subjt:  EKCIVDSTVDPKANIVE----NKPHTNKKRKLSDECS-----NKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLC

Query:  AVISECNMVG-NSKEWWVDTDATRHIFS------------NGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLV
        AV+SE N+VG N KEWW+DT ATRH+ S            NGE++FMGNS+TS+++GQGKVILKMTSGKELTL NVL+VP++ KNLVSGSLL+ +GF+LV
Subjt:  AVISECNMVG-NSKEWWVDTDATRHIFS------------NGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLV

Query:  FVSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESF-VWHGRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVC----------
        F S+K VL K+ MY+GKGY+SD ++KLNV+T++    N NK ST  Y++ES  +WHGRLGHVN+++L RLIN+N IP F  ++NH+CE C          
Subjt:  FVSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESF-VWHGRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVC----------

Query:  ----RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG------------EHGIIHQ
            R T+PL LIH+DICDLKFVQTRGG KYFITF+DD T+YCYVYLLKSKDEA+E F LYK EVENQL+ KIK +RSDRG            +HGIIH+
Subjt:  ----RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG------------EHGIIHQ

Query:  TTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPHKK------------KPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVD
        TTAPYSPQSNG+A+RKNRTLKEMMNAMLISS LPQN+W EA+LTANYLLN++P KK            KPSY +L++WGCLAKVAVP PK VKIGPKT+D
Subjt:  TTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPHKK------------KPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVD

Query:  CIFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMACKARLQKRSFDVITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLL
        C FIGY  NS AYRFLV++S++ DIH NTIMESRN +FFE++FP K   +    KR F+   S+ QN        + E RRSKR+R  KSFGPDF+T++L
Subjt:  CIFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMACKARLQKRSFDVITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLL

Query:  KNEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNNTWDLVDLPLGSTPL----------------------------------------------------
        + EPQTFKEA++S E   WKEA+ SEI+SI+ N+TW+LVDLP G  PL                                                    
Subjt:  KNEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNNTWDLVDLPLGSTPL----------------------------------------------------

Query:  ----ALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLY
            AL   EIHQMDVKT FLNG+LDEEIYM+QP+GF +P QEKKVCKL++SLYGLKQAPKQWHEKFDN M+++GFKINECDKCVYVK  ++ +VIVCLY
Subjt:  ----ALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLY

Query:  VDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGS
        VDDMLI+GS+  +I +TK ML ++F+MKDMG+ADVILGIKI +T   L+LSQSHY D IL K+ K +  +A+TP+D +LHL KN G+S++Q+EYSRIIGS
Subjt:  VDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGS

Query:  LMSLLS
        LM L+S
Subjt:  LMSLLS

A0A438I5T8 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0058.5Show/hide
Query:  SVPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSL
        +VP++ V+ GEKPEKF G++F RWQQKMLFYLTTLNLA+FL EDAP L E E D +   A+DAWKH+++LC+NY++NGL ++L NVYS   +AK LW SL
Subjt:  SVPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSL

Query:  EKKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKV
        ++KYKTE AG KKF+VG FLDYKMV+SKTV+SQVQE+QVILH+IHAE M LSE+FQVA+IIEKLPP+WKDFKNYLKHKRKE+ +E+L++RL IEE+NR+ 
Subjt:  EKKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKV

Query:  EKCIVDSTVDPKANIVE----NKPHTNKKRKLSDECS-----NKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLC
        EK    +  + KAN VE    +K  TN  +    +       +KKP    KF GKCFNC K  H+S DCR PK  + K A      +D+++ +V DIDL 
Subjt:  EKCIVDSTVDPKANIVE----NKPHTNKKRKLSDECS-----NKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLC

Query:  AVISECNMVG-NSKEWWVDTDATRHIFS------------NGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLV
        AV+SE N+VG N KEWW+DT ATRH+ S            NG ++FMGNS+TS+++GQGKVILKMTSGKELTL NVL+VP++ KNLVSGSLL+ +GF+LV
Subjt:  AVISECNMVG-NSKEWWVDTDATRHIFS------------NGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLV

Query:  FVSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESF-VWHGRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVC----------
        F S+K VL K+ MY+GKGY+SD ++KLNV+T++    N NK ST  Y++ES  +WHGRLGHVN+++L RLIN+N IP F  ++NH+CE C          
Subjt:  FVSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESF-VWHGRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVC----------

Query:  ----RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG------------EHGIIHQ
            R T+PL LIH+DICDLKFVQTRGG KYFITF+DD T+YCYVYLLKSKDEA+E F LYK EVENQL+ KIK +RSDRG            +HGIIH+
Subjt:  ----RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG------------EHGIIHQ

Query:  TTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPHKK------------KPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVD
        TTAPYSPQSNG+A+RKNRTLKEMMNAMLISS LPQN+W EA+LTANYLLN++P KK            KPSY +L++WGCLAKVAVP PK VKIGPKT+D
Subjt:  TTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPHKK------------KPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVD

Query:  CIFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMACKARLQKRSFDVITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLL
        CIFIGY  NS AYRFLV++S++ DIH NTIMESRN +FFE++FP K   +    KR   ++ S+ QN        + E RRSKR+R  KSFGPDF+T++L
Subjt:  CIFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMACKARLQKRSFDVITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLL

Query:  KNEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNNTWDLVDLPLGSTPL----------------------------------------------------
        + EPQTFKEA++S E   WKEA+ SEI+SI+ N+TW+LVDLP G  PL                                                    
Subjt:  KNEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNNTWDLVDLPLGSTPL----------------------------------------------------

Query:  ----ALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLY
            AL   EIHQMDVKT FLNG+LDEEIYM+QP+GF +P QEKKVCKL++SLYGLKQAPKQWHEKFDN M+++GFKINECDKCVYVK  ++ +VIVCLY
Subjt:  ----ALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLY

Query:  VDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGS
        VDDMLI+GS+  +I +TK ML ++F+MKDMG+ADVILGIKI +T   L+LSQSHY D IL K+ K +  +A+TP+D +LHL KN G+S++Q+EYSRIIGS
Subjt:  VDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGS

Query:  LMSLLS
        LM L+S
Subjt:  LMSLLS

A0A438K0G8 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0058.59Show/hide
Query:  SVPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSL
        +VP++ V+ GEKPEKF G++F RWQQKMLFYLTTLNLA+FL EDAP L E E D +   A+DAWKH+++LC+NY++NGL ++L NVYS   +AK LW SL
Subjt:  SVPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSL

Query:  EKKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKV
        ++KYKTE AG KKF+VG+FLDYKMV+SKTV+SQVQE+QVILH+IHAE M LSE+FQVA+IIEKLPP+WKDFKNYLKHKRKE+ +E+L++RL IEE+NR+ 
Subjt:  EKKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKV

Query:  EKCIVDSTVDPKANIVE----NKPHTNKKRKLSDECS-----NKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLC
        EK    +  + KAN VE    +K  TN  +    +       +KKP    KF GKCFNC K  H+S DCR PK  + K A      +D+++ +V DIDL 
Subjt:  EKCIVDSTVDPKANIVE----NKPHTNKKRKLSDECS-----NKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLC

Query:  AVISECNMVG-NSKEWWVDTDATRHIFS------------NGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLV
        AV+SE N+VG N KEWW+DT ATRH+ S            NGE++FMGNS+TS+++GQGKVILKMTSGKELTL NVL+VP++ KNLVSGSLL+ +GF+LV
Subjt:  AVISECNMVG-NSKEWWVDTDATRHIFS------------NGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLV

Query:  FVSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESF-VWHGRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVC----------
        F S+K VL K+ MY+GKGY+SD ++KLNV+T++    N NK ST  Y++ES  +WHGRLGHVN+++L RLIN+N IP F  ++NH+CE C          
Subjt:  FVSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESF-VWHGRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVC----------

Query:  ----RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG------------EHGIIHQ
            R T+PL LIH+DICDLKFVQTRGG KYFITF+DD T+YCYVYLLKSKDEA+E F LYK EVENQL+ KIK +RSDRG            +HGIIH+
Subjt:  ----RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG------------EHGIIHQ

Query:  TTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPHKK------------KPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVD
        TTAPYSPQSNG+A+RKNRTLKEMMNAMLISS LPQN+W EA+LTANYLLN++P KK            KPSY +L++WGCLAKVAVP PK VKIGPKT+D
Subjt:  TTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPHKK------------KPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVD

Query:  CIFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMACKARLQKRSFDVITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLL
        CIFIGY  NS AYRFLV++S++ DIH NTIMESRN +FFE++FP K   +    KR   ++ S+ QN        + E RRSKR+R  KSFGPDF+T++L
Subjt:  CIFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMACKARLQKRSFDVITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLL

Query:  KNEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNNTWDLVDLPLGSTPL----------------------------------------------------
        + EPQTFKEA++S E   WKEA+ SEI+SI+ N+TW+LVDLP G  PL                                                    
Subjt:  KNEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNNTWDLVDLPLGSTPL----------------------------------------------------

Query:  ----ALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLY
            AL   EIHQMDVKT FLNG+LDEEIYM+QP+GF +P QEKKVCKL++SLYGLKQAPKQWHEKFDN M+++GFKINECDKCVYVK  ++ +VIVCLY
Subjt:  ----ALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLY

Query:  VDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGS
        VDDMLI+GS+  +I +TK ML ++F+MKDMG+ADVILGIKI +T   L+LSQSHY D IL K+ K +  +A+TP+D +LHL KN G+S++Q+EYSRIIGS
Subjt:  VDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGS

Query:  LMSLLS
        LM L+S
Subjt:  LMSLLS

A0A438K1P8 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0058.68Show/hide
Query:  SVPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSL
        +VP++ V+ GEKPEKF G++F RWQQKMLFYLTTLNLA+FL EDAP L E E D +   A+DAWKH+++LC+NY++NGL ++L NVYS   +AK LW SL
Subjt:  SVPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSL

Query:  EKKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKV
        ++KYKTE  G KKF+VG+FLDYKMV+SKTV+SQVQE+QVILH+IHAE M LSE+FQVA+IIEKLPP+WKDFKNYLKHKRKE+ +E+L++RL IEE+NR+ 
Subjt:  EKKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKV

Query:  EKCIVDSTVDPKANIVEN------KPHTNKKR--KLSDECS-NKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLC
        EK    +  + KAN VE+      K + NK +  KL  +   +KKP    KF GKCFNC K  H+S DCR PK  + K A      +D+++ +V DIDL 
Subjt:  EKCIVDSTVDPKANIVEN------KPHTNKKR--KLSDECS-NKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLC

Query:  AVISECNMVG-NSKEWWVDTDATRHIFS------------NGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLV
        AV+SE N+VG N KEWW+DT ATRH+ S            NGE++FMGNS+TS+++GQGKVILKMTSGKELTL NVL+VP++ KNLVSGSLL+ +GF+LV
Subjt:  AVISECNMVG-NSKEWWVDTDATRHIFS------------NGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLV

Query:  FVSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESF-VWHGRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVC----------
        F S+K VL K+ MY+GKGY+SD ++KLNV+T++    N NK ST  Y++ES  +WHGRLGHVN+++L RLIN+N IP F  ++NH+CE C          
Subjt:  FVSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESF-VWHGRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVC----------

Query:  ----RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG------------EHGIIHQ
            R T+PL LIH+DICDLKFVQTRGG KYFITF+DD T+YCYVYLLKSKDEA+E F LYK EVENQL+ KIK +RSDRG            +HGIIH+
Subjt:  ----RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG------------EHGIIHQ

Query:  TTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPHKK------------KPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVD
        TTAPYSPQSNG+A+RKNRTLKEMMNAMLISS LPQN+W EA+LTANYLLN++P KK            KPSY +L++WGCLAKVAVP PK VKIGPKT+D
Subjt:  TTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPHKK------------KPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVD

Query:  CIFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMACKARLQKRSFDVITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLL
        CIFIGY  NS AYRFLV++S++ DIH NTIMESRN +FFE++FP K   +    KR   ++ S+ QN        + E RRSKR+R  KSFGPDF+T++L
Subjt:  CIFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMACKARLQKRSFDVITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLL

Query:  KNEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNNTWDLVDLPLGSTPL----------------------------------------------------
        ++EPQTFKEA++S E+  WKEA+ SEI+SI+ N+TW+LVDLP G  PL                                                    
Subjt:  KNEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNNTWDLVDLPLGSTPL----------------------------------------------------

Query:  ----ALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLY
            AL   EIHQMDVKT FLNG+LDEEIYM+QP+GF +P QEKKVCKL++SLYGLKQAPKQWHEKFDN M+++GFKINECDKCVYVK  ++ +VIVCLY
Subjt:  ----ALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLY

Query:  VDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGS
        VDDMLI+GS+  +I +TK ML ++F+MKDMG+ADVILGIKI +T   L+LSQSHY D IL K+ K +  +A+TP+D +LHL KN G+S++Q+EYSRIIGS
Subjt:  VDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGS

Query:  LMSLLS
        LM L+S
Subjt:  LMSLLS

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.2e-6923.33Show/hide
Query:  DAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSLEKKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASII
        D+WK AE   K+ I+  L ++  N  +S  +A+ +  +L+  Y+ +   ++  +  + L  K+ +  +++S       ++ ++ A    + E  +++ ++
Subjt:  DAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSLEKKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASII

Query:  EKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKVEKCIVDSTVDPKANIVENKPHTNKKRKLSDECSNKKPRF--TKKFNGKCFNCNKMEHESKD
          LP  +      ++   +E  L    V+  + +   K++    D++      IV N  +T K     +  +  K  F    K+  KC +C +  H  KD
Subjt:  EKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKVEKCIVDSTVDPKANIVENKPHTNKKRKLSDECSNKKPRF--TKKFNGKCFNCNKMEHESKD

Query:  CRKPKNF-----QKKHAQAHITEVDEVSDDVVDIDLCAVISECNMVGNSKEWWVDTDATRHIFSNGEQLFMGNSST-----SKVEGQGKV-------ILK
        C   K       ++   Q        ++  V +++  +V+  C  V       +D+ A+ H+  N E L+  +          V  QG+        I++
Subjt:  CRKPKNF-----QKKHAQAHITEVDEVSDDVVDIDLCAVISECNMVGNSKEWWVDTDATRHIFSNGEQLFMGNSST-----SKVEGQGKV-------ILK

Query:  MTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLVFVSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESFVWHGRLGHVNFN
        + +  E+TL +VL   +   NL+S   L + G  + F      + KN + + K   S  L  + V+     SIN    + F       +WH R GH++  
Subjt:  MTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLVFVSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESFVWHGRLGHVNFN

Query:  SLCRLINMNLIPKFTFDTNHR--CEVC--------------------RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEV
         L  +   N+    +   N    CE+C                     + +PL ++H+D+C      T   K YF+ F+D  T YC  YL+K K +   +
Subjt:  SLCRLINMNLIPKFTFDTNHR--CEVC--------------------RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEV

Query:  FKLYKKEVENQLSTKIKAIRSDRG-------------EHGIIHQTTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIP---
        F+ +  + E   + K+  +  D G             + GI +  T P++PQ NG+++R  RT+ E    M+  + L ++ W EA+LTA YL+NRIP   
Subjt:  FKLYKKEVENQLSTKIKAIRSDRG-------------EHGIIHQTTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIP---

Query:  ------------HKKKPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVDCIFIGYGSN------SCAYRFLVHQSDVSDIHDNTIMESRNVTF---------
                    H KKP  K L+V+G    V + K K  K   K+   IF+GY  N      +   +F+V +  V D  +  ++ SR V F         
Subjt:  ------------HKKKPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVDCIFIGYGSN------SCAYRFLVHQSDVSDIHDNTIMESRNVTF---------

Query:  --------------FENIFPHKMACKARLQKRSFDVITSEPQNRPNDE-------------------------------LNKDEELRRSKRMRISKSFG-
                       +  FP++      +Q    D   SE +N PND                                LN+ ++ +R   +  SK  G 
Subjt:  --------------FENIFPHKMACKARLQKRSFDVITSEPQNRPNDE-------------------------------LNKDEELRRSKRMRISKSFG-

Query:  -----------------------PDFVTYL------LKNEPQ--------------------------TFKEAMSSPEAPYWKEAVNSEIESIMHNNTWD
                                D +  +      LK +PQ                          +F E     +   W+EA+N+E+ +   NNTW 
Subjt:  -----------------------PDFVTYL------LKNEPQ--------------------------TFKEAMSSPEAPYWKEAVNSEIESIMHNNTWD

Query:  LVDLP------------------LGS-----TPLALHGF---------------------------------EIHQMDVKTTFLNGELDEEIYMQQPKGF
        +   P                  LG+       L   GF                                 ++HQMDVKT FLNG L EEIYM+ P+G 
Subjt:  LVDLP------------------LGS-----TPLALHGF---------------------------------EIHQMDVKTTFLNGELDEEIYMQQPKGF

Query:  VSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYV--KSNQNDHVIVCLYVDDMLILGSNINIIKTTKQMLANKFEMKDMGVADV
                VCKL +++YGLKQA + W E F+ A+    F  +  D+C+Y+  K N N+++ V LYVDD++I   ++  +   K+ L  KF M D+     
Subjt:  VSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYV--KSNQNDHVIVCLYVDDMLILGSNINIIKTTKQMLANKFEMKDMGVADV

Query:  ILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGSLMSLL
         +GI+I      + LSQS Y   IL K+   +     TP+ + ++    N D         +IG LM ++
Subjt:  ILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGSLMSLL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.4e-11728.5Show/hide
Query:  KFGGVD-FNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSLEKKYKTEVAGTKK
        KF G + F+ WQ++M   L    L K L  D        + K   +  + W   +    + I   L + + N     D+A+ +WT LE  Y ++    K 
Subjt:  KFGGVD-FNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSLEKKYKTEVAGTKK

Query:  FIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKVEKCIVDSTVDPKA
        ++  +     M      +S +     ++  +    + + E  +   ++  LP S+ +    + H +  I+L+++   L + E  RK  +    + +    
Subjt:  FIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKVEKCIVDSTVDPKA

Query:  NIVENKPHTNKKRKLSDECSNKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLCAVI-----SEC-NMVGNSKEWW
             +   N  R        K    +K     C+NCN+  H  +DC  P+   K   +    + D+ +  +V  +   V+      EC ++ G   EW 
Subjt:  NIVENKPHTNKKRKLSDECSNKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLCAVI-----SEC-NMVGNSKEWW

Query:  VDTDATRH-----------IFSNGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLVFVSDKFVLFKNKMYIGKG
        VDT A+ H           +  +   + MGN+S SK+ G G + +K   G  L L +V HVPD+  NL+SG  L ++G++  F + K+ L K  + I KG
Subjt:  VDTDATRH-----------IFSNGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLVFVSDKFVLFKNKMYIGKG

Query:  YLSDDLFKLNVLTVVPKSINNNKISTFAYIVESFVWHGRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVC---------------RMTKPLKLIHNDIC
             L++ N        I   +++     +   +WH R+GH++   L  L   +LI      T   C+ C               R    L L+++D+C
Subjt:  YLSDDLFKLNVLTVVPKSINNNKISTFAYIVESFVWHGRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVC---------------RMTKPLKLIHNDIC

Query:  DLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG-------------EHGIIHQTTAPYSPQSNGIAKRKN
            +++ GG KYF+TFIDD +R  +VY+LK+KD+  +VF+ +   VE +   K+K +RSD G              HGI H+ T P +PQ NG+A+R N
Subjt:  DLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG-------------EHGIIHQTTAPYSPQSNGIAKRKN

Query:  RTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPH-------------KKKPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVDCIFIGYGSNSCAYRFL
        RT+ E + +ML  + LP++ W EA+ TA YL+NR P               K+ SY  LKV+GC A   VPK +  K+  K++ CIFIGYG     YR  
Subjt:  RTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPH-------------KKKPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVDCIFIGYGSNSCAYRFL

Query:  VHQSDVSDIHDNTIMESRNVTFFEN---------------IFPHKMACKARLQKRSFDVIT----SEPQNRPNDELNKDEE-------------------
             + D     ++ SR+V F E+               I P+ +   +     +    T    SE   +P + + + E+                   
Subjt:  VHQSDVSDIHDNTIMESRNVTFFEN---------------IFPHKMACKARLQKRSFDVIT----SEPQNRPNDELNKDEE-------------------

Query:  -LRRSKRMRISKSFGP--DFVTYLLKNEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNNTWDLVDLPLGSTP-----------------------LALHG
         LRRS+R R+     P  ++V      EP++ KE +S PE     +A+  E+ES+  N T+ LV+LP G  P                       L + G
Subjt:  -LRRSKRMRISKSFGP--DFVTYLLKNEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNNTWDLVDLPLGSTP-----------------------LALHG

Query:  F---------------------------------EIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANG
        F                                 E+ Q+DVKT FL+G+L+EEIYM+QP+GF    ++  VCKL +SLYGLKQAP+QW+ KFD+ M +  
Subjt:  F---------------------------------EIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANG

Query:  FKINECDKCVYVKS-NQNDHVIVCLYVDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKI--SKTPQGLMLSQSHYFDTILKKYKKHDIVIAK
        +     D CVY K  ++N+ +I+ LYVDDMLI+G +  +I   K  L+  F+MKD+G A  ILG+KI   +T + L LSQ  Y + +L+++   +     
Subjt:  FKINECDKCVYVKS-NQNDHVIVCLYVDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKI--SKTPQGLMLSQSHYFDTILKKYKKHDIVIAK

Query:  TPIDASLHLGK-------NNGDSIAQLEYSRIIGSLM
        TP+   L L K           ++A++ YS  +GSLM
Subjt:  TPIDASLHLGK-------NNGDSIAQLEYSRIIGSLM

P25600 Putative transposon Ty5-1 protein YCL074W2.4e-2232.46Show/hide
Query:  MDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLYVDDMLILGSNINI
        MDV T FLN  +DE IY++QP GFV+      V +L   +YGLKQAP  W+E  +N +   GF  +E +  +Y +S  +  + + +YVDD+L+   +  I
Subjt:  MDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLYVDDMLILGSNINI

Query:  IKTTKQMLANKFEMKDMGVADVILGIKISKTPQG-LMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQL-EYSRIIGSLM
            KQ L   + MKD+G  D  LG+ I ++  G + LS   Y      + + +   + +TP+  S  L +     +  +  Y  I+G L+
Subjt:  IKTTKQMLANKFEMKDMGVADVILGIKISKTPQG-LMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQL-EYSRIIGSLM

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.2e-5821.59Show/hide
Query:  KFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEG-ETDKEKQLAVD--AWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSLEKKYKTEVAGT
        K    ++  W +++        LA FL     + P    TD   ++  D   WK  + L  + +L  +  ++    S   +A  +W +L K Y     G 
Subjt:  KFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEG-ETDKEKQLAVD--AWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSLEKKYKTEVAGT

Query:  KKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKVEKCIVDSTVDP
           +  +   +    +KT+   +Q +      +      +    QV  ++E LP  +K   + +  K     L E+  RL    N+      +  +TV P
Subjt:  KKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKVEKCIVDSTVDP

Query:  ---------------------KANIVENKPHTNKKRKLSDECSNKKP--RFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDI
                             + N  +N+ + N  +      +N  P    +K + GKC  C    H +K C + ++F                    ++
Subjt:  ---------------------KANIVENKPHTNKKRKLSDECSNKKP--RFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDI

Query:  DLCAVISECNMVGNSKEWWVDTDATRHI------------FSNGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVS-GSLLSKNGF
         L +  S       S  W +D+ AT HI            ++ G+ + + + ST  +   G   L  T  + L L+N+L+VP++ KNL+S   L + NG 
Subjt:  DLCAVISECNMVGNSKEWWVDTDATRHI------------FSNGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVS-GSLLSKNGF

Query:  KLVFVSDKFVL--FKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESFVWHGRLGHVN---FNSLCRLINMNLI-PKFTFDTNHRC-----
         + F    F +      + + +G   D+L++  + +  P S+  +  S   +      WH RLGH      NS+    +++++ P   F +   C     
Subjt:  KLVFVSDKFVL--FKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESFVWHGRLGHVN---FNSLCRLINMNLI-PKFTFDTNHRC-----

Query:  -------EVCRMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG-----------EH
                    T+PL+ I++D+     + +    +Y++ F+D  TRY ++Y LK K +  E F  +K  +EN+  T+I    SD G           +H
Subjt:  -------EVCRMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDRG-----------EH

Query:  GIIHQTTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIP-------------HKKKPSYKFLKVWGCLAKVAVPKPKMVKI
        GI H T+ P++P+ NG+++RK+R + E    +L  + +P+  W  A   A YL+NR+P                 P+Y  L+V+GC     +      K+
Subjt:  GIIHQTTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIP-------------HKKKPSYKFLKVWGCLAKVAVPKPKMVKI

Query:  GPKTVDCIFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHK----MACKARLQKRSFDVITS------------------------EPQ
          K+  C+F+GY     AY  L        +  + +  SR+V F EN FP           + Q+R    + S                         P 
Subjt:  GPKTVDCIFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHK----MACKARLQKRSFDVITS------------------------EPQ

Query:  NRPNDELNKDEELRRSKRMRISKSF------------GPDFVTYLLKNEPQT------------------FKEAMSSP----------------------
        + P+      +    +     S SF            GP   T   + + QT                    +++S+P                      
Subjt:  NRPNDELNKDEELRRSKRMRISKSF------------GPDFVTYLLKNEPQT------------------FKEAMSSP----------------------

Query:  --------------------EAPY-------------------------------------------WKEAVNSEIESIMHNNTWDLVDLP---------
                            +AP                                            W+ A+ SEI + + N+TWDLV  P         
Subjt:  --------------------EAPY-------------------------------------------WKEAVNSEIESIMHNNTWDLVDLP---------

Query:  -----------------------------------------LGSTPLAL-------HGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLI
                                                 + ST + +         + I Q+DV   FL G L +++YM QP GF+  D+   VCKL 
Subjt:  -----------------------------------------LGSTPLAL-------HGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLI

Query:  RSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLYVDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLML
        ++LYGLKQAP+ W+ +  N ++  GF  +  D  ++V       V + +YVDD+LI G++  ++  T   L+ +F +KD       LGI+  + P GL L
Subjt:  RSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLYVDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLML

Query:  SQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQ-LEYSRIIGSLMSL
        SQ  Y   +L +          TP+  S  L   +G  +    EY  I+GSL  L
Subjt:  SQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQ-LEYSRIIGSLMSL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.2e-5822.18Show/hide
Query:  MTSTNFNSVPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEG-ETDKEKQLAVD--AWKHAEYLCKNYILNGLDNTLCNVYSSV
        + +TN  +V ++ V       K    ++  W +++        LA FL    P+ P    TD   ++  D   W+  + L  + IL  +  ++    S  
Subjt:  MTSTNFNSVPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEG-ETDKEKQLAVD--AWKHAEYLCKNYILNGLDNTLCNVYSSV

Query:  DSAKNLWTSLEKKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVR
         +A  +W +L K Y                 Y  V     I++  ++ ++          +    QV  ++E LP  +K   + +  K     L E+  R
Subjt:  DSAKNLWTSLEKKYKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVR

Query:  LGIEENNRKVEKCIVDS--TVDPKANIVENKPHTNKKRKLSDECSNKK---------------------PRFTKKFNGKCFNCNKMEHESKDCRKPKNFQ
        L     NR+ +   ++S   V   AN+V ++ +TN  R  ++   N+                       R  K + G+C  C+   H +K C +   FQ
Subjt:  LGIEENNRKVEKCIVDS--TVDPKANIVENKPHTNKKRKLSDECSNKK---------------------PRFTKKFNGKCFNCNKMEHESKDCRKPKNFQ

Query:  KKHAQAHITEVDEVSDDVVDIDLCAVISECNMVGNSKEWWVDTDATRHI------------FSNGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVL
            Q   T          ++ +       N   N+  W +D+ AT HI            ++ G+ + + + ST  +   G   L  TS + L LN VL
Subjt:  KKHAQAHITEVDEVSDDVVDIDLCAVISECNMVGNSKEWWVDTDATRHI------------FSNGEQLFMGNSSTSKVEGQGKVILKMTSGKELTLNNVL

Query:  HVPDVLKNLVS-GSLLSKNGFKLVFVSDKFVL--FKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESFVWHGRLGHVNFNSLCRLINMNL
        +VP++ KNL+S   L + N   + F    F +      + + +G   D+L++  + +    S+  +  S   +      WH RLGH +   L  +I+ + 
Subjt:  HVPDVLKNLVS-GSLLSKNGFKLVFVSDKFVL--FKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESFVWHGRLGHVNFNSLCRLINMNL

Query:  IPKFTFDTNHR---CEVC---------------RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLST
        +P    + +H+   C  C                 +KPL+ I++D+     +      +Y++ F+D  TRY ++Y LK K +  + F ++K  VEN+  T
Subjt:  IPKFTFDTNHR---CEVC---------------RMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLST

Query:  KIKAIRSDRG-----------EHGIIHQTTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIP-------------HKKKPS
        +I  + SD G           +HGI H T+ P++P+ NG+++RK+R + EM   +L  + +P+  W  A   A YL+NR+P               + P+
Subjt:  KIKAIRSDRG-----------EHGIIHQTTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIP-------------HKKKPS

Query:  YKFLKVWGCLAKVAVPKPKMVKIGPKTVDCIFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMA-----------------------
        Y+ LKV+GC     +      K+  K+  C F+GY     AY  L        I    +  SR+V F E  FP                           
Subjt:  YKFLKVWGCLAKVAVPKPKMVKIGPKTVDCIFIGYGSNSCAYRFLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMA-----------------------

Query:  -------------------------------CKARLQKRSF------DVITSEPQ--------------------------NRPN------DELNKDEEL
                                       C  ++   +          +SEP                           N PN      +  N++  L
Subjt:  -------------------------------CKARLQKRSF------DVITSEPQ--------------------------NRPN------DELNKDEEL

Query:  RRS---------KRMRISKSFGP------------------------------------------------DFVTYLLKN-EPQTFKEAMSSPEAPYWKE
         +S             IS+   P                                                 + T L  N EP+T  +AM       W++
Subjt:  RRS---------KRMRISKSFGP------------------------------------------------DFVTYLLKN-EPQTFKEAMSSPEAPYWKE

Query:  AVNSEIESIMHNNTWDLVDLP--------------------------------------------------LGSTPLAL-------HGFEIHQMDVKTTF
        A+ SEI + + N+TWDLV  P                                                  + ST + +         + I Q+DV   F
Subjt:  AVNSEIESIMHNNTWDLVDLP--------------------------------------------------LGSTPLAL-------HGFEIHQMDVKTTF

Query:  LNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLYVDDMLILGSNINIIKTTKQM
        L G L +E+YM QP GFV  D+   VC+L +++YGLKQAP+ W+ +    ++  GF  +  D  ++V       + + +YVDD+LI G++  ++K T   
Subjt:  LNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLYVDDMLILGSNINIIKTTKQM

Query:  LANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQ-LEYSRIIGSLMSL
        L+ +F +K+       LGI+  + PQGL LSQ  Y   +L +          TP+  S  L  ++G  +    EY  I+GSL  L
Subjt:  LANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQ-LEYSRIIGSLMSL

Arabidopsis top hitse value%identityAlignment
AT4G00980.1 zinc knuckle (CCHC-type) family protein2.7e-1626.37Show/hide
Query:  KPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEG---ETDKEKQLAVDA----WKHAEYLCKNYILNGLDNTLCNVYS-SVDSAKNLWTSLEKK
        K  +F G  +  W  +M  +L  L L   L E  P +      ET+  +    DA    W   +YLC  +++N L + L   YS     AK LW  L+  
Subjt:  KPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEG---ETDKEKQLAVDA----WKHAEYLCKNYILNGLDNTLCNVYS-SVDSAKNLWTSLEKK

Query:  YKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKVEKC
        Y+ + + +K+  V K+++++MV  + ++ QVQ    I   I +  M L E+F V++II K PPSW+ F   L  + + + +  L+ R+  EE   +    
Subjt:  YKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKVEKC

Query:  IVDSTVDPKANIVENKPH--TNKKRKLSDECSNKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAH
         V       ++ +E  P   T  +   S     K+P   ++    C NC +  H +K C   K+ ++   +++
Subjt:  IVDSTVDPKANIVENKPH--TNKKRKLSDECSNKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAH

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.6e-2732.68Show/hide
Query:  ALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQE----KKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLY
        A++ F +HQ+D+   FLNG+LDEEIYM+ P G+ +   +      VC L +S+YGLKQA +QW  KF   ++  GF  +  D   ++K      + V +Y
Subjt:  ALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQE----KKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSNQNDHVIVCLY

Query:  VDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNN-GDSIAQLEYSRIIG
        VDD++I  +N   +   K  L + F+++D+G     LG++I+++  G+ + Q  Y   +L +        +  P+D S+    ++ GD +    Y R+IG
Subjt:  VDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNN-GDSIAQLEYSRIIG

Query:  SLMSL
         LM L
Subjt:  SLMSL

ATMG00810.1 DNA/RNA polymerases superfamily protein9.2e-0933.02Show/hide
Query:  LYVDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRII
        LYVDD+L+ GS+  ++      L++ F MKD+G     LGI+I   P GL LSQ+ Y + IL      D     TP+   L+   +        ++  I+
Subjt:  LYVDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRII

Query:  GSLMSL
        G+L  L
Subjt:  GSLMSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCAACAAACTTTAATTCAGTTCCTGTAACTGGTGTTGCTCATGGAGAGAAACCTGAAAAATTTGGTGGTGTTGATTTCAATCGTTGGCAACAAAAAATGTTGTT
CTATCTCACCACTTTAAATTTGGCAAAGTTTCTCAAAGAGGATGCTCCCATTTTACCTGAGGGAGAAACTGACAAAGAAAAGCAACTTGCAGTAGATGCATGGAAACATG
CAGAATACCTTTGCAAGAATTACATTCTAAATGGATTGGACAACACGCTGTGCAATGTGTATAGTAGTGTTGATTCAGCAAAAAATCTCTGGACTTCATTAGAGAAGAAG
TACAAAACTGAAGTTGCTGGTACAAAGAAATTTATCGTTGGAAAATTTCTAGATTACAAAATGGTGAACTCCAAAACTGTAATCAGTCAGGTTCAGGAAATCCAGGTAAT
CTTACATGATATACATGCTGAGAATATGACTTTGAGTGAGTCTTTTCAGGTAGCATCAATAATTGAAAAATTGCCACCCTCATGGAAGGACTTCAAAAATTATCTCAAGC
ATAAACGCAAAGAGATAAAGCTTGAGGAACTAGTAGTTCGACTTGGGATTGAGGAGAATAATAGAAAGGTAGAAAAGTGTATTGTAGATAGTACAGTAGATCCCAAGGCC
AACATTGTGGAAAATAAACCACACACTAACAAGAAAAGGAAACTTTCTGATGAATGTTCAAATAAAAAACCGCGATTCACGAAAAAGTTCAATGGCAAGTGCTTCAACTG
CAACAAAATGGAACATGAATCTAAGGATTGTCGTAAGCCAAAGAACTTTCAGAAAAAACATGCTCAAGCTCATATCACAGAAGTTGATGAAGTATCAGATGATGTTGTAG
ATATTGACCTTTGTGCAGTCATTTCGGAGTGCAACATGGTGGGCAATTCCAAGGAATGGTGGGTAGACACTGATGCTACTCGTCATATTTTCTCTAATGGAGAACAATTA
TTTATGGGTAACTCCTCTACGTCAAAGGTCGAGGGACAAGGAAAAGTAATTCTTAAGATGACCTCTGGGAAGGAACTCACTCTCAACAATGTGCTTCATGTTCCTGACGT
TCTTAAGAACTTAGTTTCTGGTTCATTACTTAGTAAGAATGGCTTTAAGTTGGTCTTTGTATCTGATAAATTTGTACTTTTCAAGAATAAGATGTACATCGGAAAAGGTT
ATCTGAGTGATGATCTGTTTAAATTAAATGTACTCACAGTTGTACCCAAAAGTATTAATAATAATAAAATATCTACTTTTGCTTATATTGTTGAGTCATTTGTTTGGCAT
GGCAGACTAGGACATGTCAACTTCAATTCTTTGTGTAGGCTGATTAATATGAACTTGATTCCAAAATTCACTTTTGATACAAATCATAGATGTGAAGTATGTAGAATGAC
CAAACCTTTAAAGTTAATTCACAATGATATTTGTGACTTGAAATTTGTGCAAACTAGAGGTGGGAAAAAGTATTTTATTACTTTTATAGATGATTGCACAAGATATTGTT
ATGTTTATCTGCTGAAAAGCAAAGATGAGGCAGTTGAAGTGTTTAAGCTTTATAAAAAAGAGGTTGAAAATCAACTTAGCACAAAAATTAAGGCAATAAGAAGTGATCGA
GGTGAACATGGCATTATTCACCAAACTACTGCTCCATACTCACCTCAATCCAATGGAATTGCTAAACGAAAAAACCGAACACTTAAGGAAATGATGAATGCTATGCTTAT
AAGTTCAGGTTTACCCCAAAATTTGTGGAGAGAAGCTTTGTTGACAGCAAATTACTTATTAAACAGGATACCTCATAAGAAAAAGCCTTCATACAAATTCTTAAAAGTGT
GGGGGTGCCTAGCAAAGGTTGCAGTGCCTAAACCCAAAATGGTTAAAATAGGACCAAAAACTGTTGATTGCATATTTATTGGTTATGGTAGCAATAGTTGTGCATATCGA
TTCCTAGTTCATCAATCAGATGTCTCAGATATACATGATAATACTATCATGGAATCAAGGAATGTAACATTCTTTGAGAATATTTTTCCACACAAAATGGCTTGTAAAGC
AAGGTTACAAAAACGTTCTTTTGATGTTATAACGAGTGAACCTCAAAATAGACCAAATGATGAGTTAAACAAGGATGAGGAACTTAGACGAAGTAAAAGGATGAGGATTT
CAAAATCATTTGGGCCTGATTTTGTAACATATTTGTTAAAAAACGAACCACAAACATTTAAAGAGGCCATGTCCTCTCCTGAAGCTCCATATTGGAAAGAAGCCGTGAAT
AGTGAAATTGAGTCCATTATGCATAACAATACTTGGGATCTAGTTGATCTTCCATTAGGAAGTACACCACTTGCTTTGCATGGATTTGAGATACATCAGATGGATGTTAA
AACAACATTTTTAAATGGTGAGTTAGATGAAGAGATCTACATGCAACAACCTAAAGGGTTTGTTTCCCCCGATCAAGAAAAGAAAGTTTGCAAATTAATTAGGTCTCTTT
ATGGACTAAAACAAGCACCAAAACAATGGCATGAAAAATTTGACAATGCAATGATGGCCAATGGATTTAAAATCAATGAATGTGACAAATGTGTATATGTCAAAAGCAAT
CAGAATGACCATGTCATTGTGTGCCTGTATGTTGATGATATGCTAATTTTAGGTAGCAATATCAACATTATTAAGACTACCAAACAAATGTTGGCCAATAAATTTGAGAT
GAAAGACATGGGTGTCGCAGATGTTATTCTAGGTATTAAAATTTCTAAAACCCCACAAGGGTTAATGCTGTCTCAATCACATTATTTTGACACAATATTGAAGAAATATA
AAAAACATGACATTGTCATTGCAAAGACCCCAATTGATGCTAGTCTCCATTTAGGTAAAAATAATGGGGATAGTATAGCACAATTAGAATACTCTCGCATCATTGGTAGT
TTAATGTCTTTGCTGAGTTCTCAAATTCATGCCCATGATCAGTTTGTATTCGGCCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACTTCAACAAACTTTAATTCAGTTCCTGTAACTGGTGTTGCTCATGGAGAGAAACCTGAAAAATTTGGTGGTGTTGATTTCAATCGTTGGCAACAAAAAATGTTGTT
CTATCTCACCACTTTAAATTTGGCAAAGTTTCTCAAAGAGGATGCTCCCATTTTACCTGAGGGAGAAACTGACAAAGAAAAGCAACTTGCAGTAGATGCATGGAAACATG
CAGAATACCTTTGCAAGAATTACATTCTAAATGGATTGGACAACACGCTGTGCAATGTGTATAGTAGTGTTGATTCAGCAAAAAATCTCTGGACTTCATTAGAGAAGAAG
TACAAAACTGAAGTTGCTGGTACAAAGAAATTTATCGTTGGAAAATTTCTAGATTACAAAATGGTGAACTCCAAAACTGTAATCAGTCAGGTTCAGGAAATCCAGGTAAT
CTTACATGATATACATGCTGAGAATATGACTTTGAGTGAGTCTTTTCAGGTAGCATCAATAATTGAAAAATTGCCACCCTCATGGAAGGACTTCAAAAATTATCTCAAGC
ATAAACGCAAAGAGATAAAGCTTGAGGAACTAGTAGTTCGACTTGGGATTGAGGAGAATAATAGAAAGGTAGAAAAGTGTATTGTAGATAGTACAGTAGATCCCAAGGCC
AACATTGTGGAAAATAAACCACACACTAACAAGAAAAGGAAACTTTCTGATGAATGTTCAAATAAAAAACCGCGATTCACGAAAAAGTTCAATGGCAAGTGCTTCAACTG
CAACAAAATGGAACATGAATCTAAGGATTGTCGTAAGCCAAAGAACTTTCAGAAAAAACATGCTCAAGCTCATATCACAGAAGTTGATGAAGTATCAGATGATGTTGTAG
ATATTGACCTTTGTGCAGTCATTTCGGAGTGCAACATGGTGGGCAATTCCAAGGAATGGTGGGTAGACACTGATGCTACTCGTCATATTTTCTCTAATGGAGAACAATTA
TTTATGGGTAACTCCTCTACGTCAAAGGTCGAGGGACAAGGAAAAGTAATTCTTAAGATGACCTCTGGGAAGGAACTCACTCTCAACAATGTGCTTCATGTTCCTGACGT
TCTTAAGAACTTAGTTTCTGGTTCATTACTTAGTAAGAATGGCTTTAAGTTGGTCTTTGTATCTGATAAATTTGTACTTTTCAAGAATAAGATGTACATCGGAAAAGGTT
ATCTGAGTGATGATCTGTTTAAATTAAATGTACTCACAGTTGTACCCAAAAGTATTAATAATAATAAAATATCTACTTTTGCTTATATTGTTGAGTCATTTGTTTGGCAT
GGCAGACTAGGACATGTCAACTTCAATTCTTTGTGTAGGCTGATTAATATGAACTTGATTCCAAAATTCACTTTTGATACAAATCATAGATGTGAAGTATGTAGAATGAC
CAAACCTTTAAAGTTAATTCACAATGATATTTGTGACTTGAAATTTGTGCAAACTAGAGGTGGGAAAAAGTATTTTATTACTTTTATAGATGATTGCACAAGATATTGTT
ATGTTTATCTGCTGAAAAGCAAAGATGAGGCAGTTGAAGTGTTTAAGCTTTATAAAAAAGAGGTTGAAAATCAACTTAGCACAAAAATTAAGGCAATAAGAAGTGATCGA
GGTGAACATGGCATTATTCACCAAACTACTGCTCCATACTCACCTCAATCCAATGGAATTGCTAAACGAAAAAACCGAACACTTAAGGAAATGATGAATGCTATGCTTAT
AAGTTCAGGTTTACCCCAAAATTTGTGGAGAGAAGCTTTGTTGACAGCAAATTACTTATTAAACAGGATACCTCATAAGAAAAAGCCTTCATACAAATTCTTAAAAGTGT
GGGGGTGCCTAGCAAAGGTTGCAGTGCCTAAACCCAAAATGGTTAAAATAGGACCAAAAACTGTTGATTGCATATTTATTGGTTATGGTAGCAATAGTTGTGCATATCGA
TTCCTAGTTCATCAATCAGATGTCTCAGATATACATGATAATACTATCATGGAATCAAGGAATGTAACATTCTTTGAGAATATTTTTCCACACAAAATGGCTTGTAAAGC
AAGGTTACAAAAACGTTCTTTTGATGTTATAACGAGTGAACCTCAAAATAGACCAAATGATGAGTTAAACAAGGATGAGGAACTTAGACGAAGTAAAAGGATGAGGATTT
CAAAATCATTTGGGCCTGATTTTGTAACATATTTGTTAAAAAACGAACCACAAACATTTAAAGAGGCCATGTCCTCTCCTGAAGCTCCATATTGGAAAGAAGCCGTGAAT
AGTGAAATTGAGTCCATTATGCATAACAATACTTGGGATCTAGTTGATCTTCCATTAGGAAGTACACCACTTGCTTTGCATGGATTTGAGATACATCAGATGGATGTTAA
AACAACATTTTTAAATGGTGAGTTAGATGAAGAGATCTACATGCAACAACCTAAAGGGTTTGTTTCCCCCGATCAAGAAAAGAAAGTTTGCAAATTAATTAGGTCTCTTT
ATGGACTAAAACAAGCACCAAAACAATGGCATGAAAAATTTGACAATGCAATGATGGCCAATGGATTTAAAATCAATGAATGTGACAAATGTGTATATGTCAAAAGCAAT
CAGAATGACCATGTCATTGTGTGCCTGTATGTTGATGATATGCTAATTTTAGGTAGCAATATCAACATTATTAAGACTACCAAACAAATGTTGGCCAATAAATTTGAGAT
GAAAGACATGGGTGTCGCAGATGTTATTCTAGGTATTAAAATTTCTAAAACCCCACAAGGGTTAATGCTGTCTCAATCACATTATTTTGACACAATATTGAAGAAATATA
AAAAACATGACATTGTCATTGCAAAGACCCCAATTGATGCTAGTCTCCATTTAGGTAAAAATAATGGGGATAGTATAGCACAATTAGAATACTCTCGCATCATTGGTAGT
TTAATGTCTTTGCTGAGTTCTCAAATTCATGCCCATGATCAGTTTGTATTCGGCCAATGA
Protein sequenceShow/hide protein sequence
MTSTNFNSVPVTGVAHGEKPEKFGGVDFNRWQQKMLFYLTTLNLAKFLKEDAPILPEGETDKEKQLAVDAWKHAEYLCKNYILNGLDNTLCNVYSSVDSAKNLWTSLEKK
YKTEVAGTKKFIVGKFLDYKMVNSKTVISQVQEIQVILHDIHAENMTLSESFQVASIIEKLPPSWKDFKNYLKHKRKEIKLEELVVRLGIEENNRKVEKCIVDSTVDPKA
NIVENKPHTNKKRKLSDECSNKKPRFTKKFNGKCFNCNKMEHESKDCRKPKNFQKKHAQAHITEVDEVSDDVVDIDLCAVISECNMVGNSKEWWVDTDATRHIFSNGEQL
FMGNSSTSKVEGQGKVILKMTSGKELTLNNVLHVPDVLKNLVSGSLLSKNGFKLVFVSDKFVLFKNKMYIGKGYLSDDLFKLNVLTVVPKSINNNKISTFAYIVESFVWH
GRLGHVNFNSLCRLINMNLIPKFTFDTNHRCEVCRMTKPLKLIHNDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEVFKLYKKEVENQLSTKIKAIRSDR
GEHGIIHQTTAPYSPQSNGIAKRKNRTLKEMMNAMLISSGLPQNLWREALLTANYLLNRIPHKKKPSYKFLKVWGCLAKVAVPKPKMVKIGPKTVDCIFIGYGSNSCAYR
FLVHQSDVSDIHDNTIMESRNVTFFENIFPHKMACKARLQKRSFDVITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLKNEPQTFKEAMSSPEAPYWKEAVN
SEIESIMHNNTWDLVDLPLGSTPLALHGFEIHQMDVKTTFLNGELDEEIYMQQPKGFVSPDQEKKVCKLIRSLYGLKQAPKQWHEKFDNAMMANGFKINECDKCVYVKSN
QNDHVIVCLYVDDMLILGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLSQSHYFDTILKKYKKHDIVIAKTPIDASLHLGKNNGDSIAQLEYSRIIGS
LMSLLSSQIHAHDQFVFGQ