; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0014446 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0014446
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPol protein
Genome locationchr01:25975116..25975932
RNA-Seq ExpressionPay0014446
SyntenyPay0014446
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026214.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]7.0e-5987.07Show/hide
Query:  MLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLIQ----------HIFDFEPLQTNEILSYEEQQVEILAMEVKLLCSRVEIF
        MLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRL   +            HI DFEPLQTNEILSYEEQQVEILAMEVKLLCSRVEIF
Subjt:  MLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLIQ----------HIFDFEPLQTNEILSYEEQQVEILAMEVKLLCSRVEIF

Query:  LEIEKFLRPQEVASSSSFVRKVSIFFVRYFLSRPVVVGDPGFVQAFV
        LEIEKFLRPQEVASSSSFVRKV IFFVRYFLSR VVVGDPGFVQAFV
Subjt:  LEIEKFLRPQEVASSSSFVRKVSIFFVRYFLSRPVVVGDPGFVQAFV

KAA0059509.1 pol protein [Cucumis melo var. makuwa]4.7e-3163.11Show/hide
Query:  MLGPKLVHTTNEATQKIRACMLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLI----------------QHIFDFEPLQTNE
        +L P+LV TTNEA QKIRA ML A SRQKSY DVRH+DLEFD+GDMVF+KV PMKGVLRFEK+G+LSP  +                 H+ DFEPLQ NE
Subjt:  MLGPKLVHTTNEATQKIRACMLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLI----------------QHIFDFEPLQTNE

Query:  ILSYEEQQVEILAMEVKLLCSR
         LSY+EQ VEILA EVK+L +R
Subjt:  ILSYEEQQVEILAMEVKLLCSR

KAA0066507.1 pol protein [Cucumis melo var. makuwa]1.2e-3171.96Show/hide
Query:  MLGPKLVHTTNEATQKIRACMLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLIQHIFDFEPLQTNEILSYEEQQVEILAMEV
        +LGP+LV TTN A QKIRA ML AQSRQKSY DVR +DLEFD+GDMVF+KV PMKGVLR EK+G+LSP    H+ DFEPLQ NE LSYEEQ +EILA EV
Subjt:  MLGPKLVHTTNEATQKIRACMLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLIQHIFDFEPLQTNEILSYEEQQVEILAMEV

Query:  KLLCSRV
        K L +RV
Subjt:  KLLCSRV

TYK14095.1 pol protein [Cucumis melo var. makuwa]4.7e-3163.11Show/hide
Query:  MLGPKLVHTTNEATQKIRACMLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLI----------------QHIFDFEPLQTNE
        +L P+LV TTNEA QKIRA ML A SRQKSY DVRH+DLEFD+GDMVF+KV PMKGVLRFEK+G+LSP  +                 H+ DFEPLQ NE
Subjt:  MLGPKLVHTTNEATQKIRACMLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLI----------------QHIFDFEPLQTNE

Query:  ILSYEEQQVEILAMEVKLLCSR
         LSY+EQ VEILA EVK+L +R
Subjt:  ILSYEEQQVEILAMEVKLLCSR

XP_016902219.1 PREDICTED: uncharacterized protein LOC107991586 [Cucumis melo]1.4e-7898.73Show/hide
Query:  MLGPKLVHTTNEATQKIRACMLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLIQHIFDFEPLQTNEILSYEEQQVEILAMEV
        MLGPKLVHTTNEATQKIRACMLIAQSRQKSYDDVRHRD EFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLIQHIFDFEPLQTNEILSYEEQQVEILAMEV
Subjt:  MLGPKLVHTTNEATQKIRACMLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLIQHIFDFEPLQTNEILSYEEQQVEILAMEV

Query:  KLLCSRVEIFLEIEKFLRPQEVASSSSFVRKVSIFFVRYFLSRPVVVGDPGFVQAFV
        KLLCSRVEIFLEIEKFLRPQEVASSSSFVRKVSIFFVRYFLSR VVVGDPGFVQAFV
Subjt:  KLLCSRVEIFLEIEKFLRPQEVASSSSFVRKVSIFFVRYFLSRPVVVGDPGFVQAFV

TrEMBL top hitse value%identityAlignment
A0A1S4E1W4 uncharacterized protein LOC1079915866.6e-7998.73Show/hide
Query:  MLGPKLVHTTNEATQKIRACMLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLIQHIFDFEPLQTNEILSYEEQQVEILAMEV
        MLGPKLVHTTNEATQKIRACMLIAQSRQKSYDDVRHRD EFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLIQHIFDFEPLQTNEILSYEEQQVEILAMEV
Subjt:  MLGPKLVHTTNEATQKIRACMLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLIQHIFDFEPLQTNEILSYEEQQVEILAMEV

Query:  KLLCSRVEIFLEIEKFLRPQEVASSSSFVRKVSIFFVRYFLSRPVVVGDPGFVQAFV
        KLLCSRVEIFLEIEKFLRPQEVASSSSFVRKVSIFFVRYFLSR VVVGDPGFVQAFV
Subjt:  KLLCSRVEIFLEIEKFLRPQEVASSSSFVRKVSIFFVRYFLSRPVVVGDPGFVQAFV

A0A5A7SKI0 DNA/RNA polymerases superfamily protein3.4e-5987.07Show/hide
Query:  MLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLIQ----------HIFDFEPLQTNEILSYEEQQVEILAMEVKLLCSRVEIF
        MLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRL   +            HI DFEPLQTNEILSYEEQQVEILAMEVKLLCSRVEIF
Subjt:  MLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLIQ----------HIFDFEPLQTNEILSYEEQQVEILAMEVKLLCSRVEIF

Query:  LEIEKFLRPQEVASSSSFVRKVSIFFVRYFLSRPVVVGDPGFVQAFV
        LEIEKFLRPQEVASSSSFVRKV IFFVRYFLSR VVVGDPGFVQAFV
Subjt:  LEIEKFLRPQEVASSSSFVRKVSIFFVRYFLSRPVVVGDPGFVQAFV

A0A5A7V152 Pol protein2.3e-3163.11Show/hide
Query:  MLGPKLVHTTNEATQKIRACMLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLI----------------QHIFDFEPLQTNE
        +L P+LV TTNEA QKIRA ML A SRQKSY DVRH+DLEFD+GDMVF+KV PMKGVLRFEK+G+LSP  +                 H+ DFEPLQ NE
Subjt:  MLGPKLVHTTNEATQKIRACMLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLI----------------QHIFDFEPLQTNE

Query:  ILSYEEQQVEILAMEVKLLCSR
         LSY+EQ VEILA EVK+L +R
Subjt:  ILSYEEQQVEILAMEVKLLCSR

A0A5A7VHE5 Pol protein6.0e-3271.96Show/hide
Query:  MLGPKLVHTTNEATQKIRACMLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLIQHIFDFEPLQTNEILSYEEQQVEILAMEV
        +LGP+LV TTN A QKIRA ML AQSRQKSY DVR +DLEFD+GDMVF+KV PMKGVLR EK+G+LSP    H+ DFEPLQ NE LSYEEQ +EILA EV
Subjt:  MLGPKLVHTTNEATQKIRACMLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLIQHIFDFEPLQTNEILSYEEQQVEILAMEV

Query:  KLLCSRV
        K L +RV
Subjt:  KLLCSRV

A0A5D3CR86 Pol protein2.3e-3163.11Show/hide
Query:  MLGPKLVHTTNEATQKIRACMLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLI----------------QHIFDFEPLQTNE
        +L P+LV TTNEA QKIRA ML A SRQKSY DVRH+DLEFD+GDMVF+KV PMKGVLRFEK+G+LSP  +                 H+ DFEPLQ NE
Subjt:  MLGPKLVHTTNEATQKIRACMLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLI----------------QHIFDFEPLQTNE

Query:  ILSYEEQQVEILAMEVKLLCSR
         LSY+EQ VEILA EVK+L +R
Subjt:  ILSYEEQQVEILAMEVKLLCSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGGCCCTAAGCTAGTTCATACCACTAATGAAGCTACACAGAAGATTAGAGCCTGTATGTTGATAGCACAGAGCAGACAGAAGAGTTACGATGATGTACGACATAG
GGATCTTGAGTTTGATATAGGGGACATGGTTTTTGTGAAGGTAACACCAATGAAGGGTGTTCTGAGATTTGAGAAGAGGGGAAGGTTGAGTCCCTTTTTGATTCAACATA
TATTTGACTTTGAGCCATTGCAAACTAATGAGATTTTGAGTTATGAGGAGCAACAAGTTGAGATTTTGGCAATGGAAGTTAAGCTACTTTGTAGCAGAGTTGAGATATTT
TTGGAAATTGAGAAATTTCTTCGTCCACAAGAAGTGGCATCATCGTCTTCCTTCGTCCGCAAGGTTTCTATATTTTTCGTCAGATATTTTCTATCACGTCCAGTCGTAGT
TGGAGATCCAGGCTTCGTTCAAGCATTCGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGGCCCTAAGCTAGTTCATACCACTAATGAAGCTACACAGAAGATTAGAGCCTGTATGTTGATAGCACAGAGCAGACAGAAGAGTTACGATGATGTACGACATAG
GGATCTTGAGTTTGATATAGGGGACATGGTTTTTGTGAAGGTAACACCAATGAAGGGTGTTCTGAGATTTGAGAAGAGGGGAAGGTTGAGTCCCTTTTTGATTCAACATA
TATTTGACTTTGAGCCATTGCAAACTAATGAGATTTTGAGTTATGAGGAGCAACAAGTTGAGATTTTGGCAATGGAAGTTAAGCTACTTTGTAGCAGAGTTGAGATATTT
TTGGAAATTGAGAAATTTCTTCGTCCACAAGAAGTGGCATCATCGTCTTCCTTCGTCCGCAAGGTTTCTATATTTTTCGTCAGATATTTTCTATCACGTCCAGTCGTAGT
TGGAGATCCAGGCTTCGTTCAAGCATTCGTGTGA
Protein sequenceShow/hide protein sequence
MLGPKLVHTTNEATQKIRACMLIAQSRQKSYDDVRHRDLEFDIGDMVFVKVTPMKGVLRFEKRGRLSPFLIQHIFDFEPLQTNEILSYEEQQVEILAMEVKLLCSRVEIF
LEIEKFLRPQEVASSSSFVRKVSIFFVRYFLSRPVVVGDPGFVQAFV