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Pay0014504 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0014504
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr01:24399975..24400529
RNA-Seq ExpressionPay0014504
SyntenyPay0014504
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34247.1 ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]4.8e-8387.86Show/hide
Query:  MTANSIRAQYEGLPQTTFMSTKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSREDQLVRQFVQSLKGNAFEWYTDLEPEVIDSWE
        M ANSIRAQY G PQT+FM +KSYTKRIDNLRMPLGYQPPKFQQFDG+GNPKQHIAHFVETCENAGSR DQLV+QFV+SLKGNAFEWYTDLEPEVID+WE
Subjt:  MTANSIRAQYEGLPQTTFMSTKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSREDQLVRQFVQSLKGNAFEWYTDLEPEVIDSWE

Query:  QLEKEFLNRFYSTKRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHYKNEVIYV
        QLE EFLNRFYST+R VSMMELTNTKQRKGEPVIDYINRWRALSLDCKD+LTELSAVEMCTQGMH+  E++Y+
Subjt:  QLEKEFLNRFYSTKRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHYKNEVIYV
KAA0039558.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.4e-8290.96Show/hide
Query:  MTANSIRAQYEGLPQTTFMSTKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSREDQLVRQFVQSLKGNAFEWYTDLEPEVIDSWE
        M  N IRAQY G PQTTFM +K YTKRID+LRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSR DQLVRQFV+SLKGN FEWYTDLEPEVIDSWE
Subjt:  MTANSIRAQYEGLPQTTFMSTKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSREDQLVRQFVQSLKGNAFEWYTDLEPEVIDSWE

Query:  QLEKEFLNRFYSTKRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHY
        QLEKEFLNRFYS +RTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMH+
Subjt:  QLEKEFLNRFYSTKRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHY
KAA0051584.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.2e-8391.57Show/hide
Query:  MTANSIRAQYEGLPQTTFMSTKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSREDQLVRQFVQSLKGNAFEWYTDLEPEVIDSWE
        M ANSIRAQY G PQTTFM +K YTKRIDNLRMPLGYQPPKFQQFD KGNPKQHIAHFVETCENAGSR DQLVRQF++SLKGN FEWYTDLEPEVIDSW+
Subjt:  MTANSIRAQYEGLPQTTFMSTKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSREDQLVRQFVQSLKGNAFEWYTDLEPEVIDSWE

Query:  QLEKEFLNRFYSTKRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHY
        QLEKEFLNRFYST+RTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMH+
Subjt:  QLEKEFLNRFYSTKRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHY
KAA0062019.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.8e-8391.57Show/hide
Query:  MTANSIRAQYEGLPQTTFMSTKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSREDQLVRQFVQSLKGNAFEWYTDLEPEVIDSWE
        M ANSIRAQY G PQTTFM +KSYTKRIDNL MPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSR DQLVRQFV+SLKGNAFEWYTDLEP+VIDSWE
Subjt:  MTANSIRAQYEGLPQTTFMSTKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSREDQLVRQFVQSLKGNAFEWYTDLEPEVIDSWE

Query:  QLEKEFLNRFYSTKRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHY
        QLEKEFLNRFYST+RT+SMMELTNTKQ KGEPVIDYINRWRALSLDCKDRLT+LSAVEMCTQGMH+
Subjt:  QLEKEFLNRFYSTKRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHY
XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]4.1e-8290.36Show/hide
Query:  MTANSIRAQYEGLPQTTFMSTKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSREDQLVRQFVQSLKGNAFEWYTDLEPEVIDSWE
        M  NSIRAQY G  QT+FM +K YTKRIDNLRMPLGYQPPKFQQFDGKGNPKQH+AHFVETCENAGSR DQLVRQFV+SLKGNAFEWYTDLEPE I+SWE
Subjt:  MTANSIRAQYEGLPQTTFMSTKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSREDQLVRQFVQSLKGNAFEWYTDLEPEVIDSWE

Query:  QLEKEFLNRFYSTKRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHY
        QLEKEFLNRFYST+RTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMH+
Subjt:  QLEKEFLNRFYSTKRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHY
TrEMBL top hitse value%identityAlignment
A0A5A7SXL9 Ty3-gypsy retrotransposon protein2.3e-8387.86Show/hide
Query:  MTANSIRAQYEGLPQTTFMSTKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSREDQLVRQFVQSLKGNAFEWYTDLEPEVIDSWE
        M ANSIRAQY G PQT+FM +KSYTKRIDNLRMPLGYQPPKFQQFDG+GNPKQHIAHFVETCENAGSR DQLV+QFV+SLKGNAFEWYTDLEPEVID+WE
Subjt:  MTANSIRAQYEGLPQTTFMSTKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSREDQLVRQFVQSLKGNAFEWYTDLEPEVIDSWE

Query:  QLEKEFLNRFYSTKRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHYKNEVIYV
        QLE EFLNRFYST+R VSMMELTNTKQRKGEPVIDYINRWRALSLDCKD+LTELSAVEMCTQGMH+  E++Y+
Subjt:  QLEKEFLNRFYSTKRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHYKNEVIYV
A0A5A7T9K9 Ty3-gypsy retrotransposon protein1.2e-8290.96Show/hide
Query:  MTANSIRAQYEGLPQTTFMSTKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSREDQLVRQFVQSLKGNAFEWYTDLEPEVIDSWE
        M  N IRAQY G PQTTFM +K YTKRID+LRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSR DQLVRQFV+SLKGN FEWYTDLEPEVIDSWE
Subjt:  MTANSIRAQYEGLPQTTFMSTKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSREDQLVRQFVQSLKGNAFEWYTDLEPEVIDSWE

Query:  QLEKEFLNRFYSTKRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHY
        QLEKEFLNRFYS +RTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMH+
Subjt:  QLEKEFLNRFYSTKRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHY
A0A5A7U8E4 Retrotransposon gag protein1.0e-8391.57Show/hide
Query:  MTANSIRAQYEGLPQTTFMSTKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSREDQLVRQFVQSLKGNAFEWYTDLEPEVIDSWE
        M ANSIRAQY G PQTTFM +K YTKRIDNLRMPLGYQPPKFQQFD KGNPKQHIAHFVETCENAGSR DQLVRQF++SLKGN FEWYTDLEPEVIDSW+
Subjt:  MTANSIRAQYEGLPQTTFMSTKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSREDQLVRQFVQSLKGNAFEWYTDLEPEVIDSWE

Query:  QLEKEFLNRFYSTKRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHY
        QLEKEFLNRFYST+RTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMH+
Subjt:  QLEKEFLNRFYSTKRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHY
A0A5A7V8K5 Ty3-gypsy retrotransposon protein1.4e-8391.57Show/hide
Query:  MTANSIRAQYEGLPQTTFMSTKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSREDQLVRQFVQSLKGNAFEWYTDLEPEVIDSWE
        M ANSIRAQY G PQTTFM +KSYTKRIDNL MPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSR DQLVRQFV+SLKGNAFEWYTDLEP+VIDSWE
Subjt:  MTANSIRAQYEGLPQTTFMSTKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSREDQLVRQFVQSLKGNAFEWYTDLEPEVIDSWE

Query:  QLEKEFLNRFYSTKRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHY
        QLEKEFLNRFYST+RT+SMMELTNTKQ KGEPVIDYINRWRALSLDCKDRLT+LSAVEMCTQGMH+
Subjt:  QLEKEFLNRFYSTKRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHY
E5GCP6 Ty3-gypsy retrotransposon protein2.3e-8387.86Show/hide
Query:  MTANSIRAQYEGLPQTTFMSTKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSREDQLVRQFVQSLKGNAFEWYTDLEPEVIDSWE
        M ANSIRAQY G PQT+FM +KSYTKRIDNLRMPLGYQPPKFQQFDG+GNPKQHIAHFVETCENAGSR DQLV+QFV+SLKGNAFEWYTDLEPEVID+WE
Subjt:  MTANSIRAQYEGLPQTTFMSTKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSREDQLVRQFVQSLKGNAFEWYTDLEPEVIDSWE

Query:  QLEKEFLNRFYSTKRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHYKNEVIYV
        QLE EFLNRFYST+R VSMMELTNTKQRKGEPVIDYINRWRALSLDCKD+LTELSAVEMCTQGMH+  E++Y+
Subjt:  QLEKEFLNRFYSTKRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHYKNEVIYV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGCGAATTCCATTAGAGCTCAGTATGAAGGACTGCCGCAAACTACTTTCATGTCCACTAAGTCGTACACCAAGAGAATCGATAACTTGAGAATGCCACTTGGGTA
CCAACCTCCAAAATTCCAACAATTCGATGGAAAGGGCAACCCAAAGCAACATATCGCCCACTTTGTCGAAACATGTGAGAATGCAGGATCAAGAGAAGACCAACTTGTCA
GGCAATTCGTTCAAAGCTTGAAAGGAAATGCCTTCGAGTGGTACACCGATCTAGAGCCAGAAGTCATTGACAGCTGGGAACAATTAGAAAAGGAGTTCCTCAACCGTTTC
TATAGCACCAAACGTACCGTAAGCATGATGGAGCTTACAAACACCAAACAGCGGAAGGGAGAGCCAGTCATCGATTACATAAACCGATGGAGAGCACTAAGTCTTGACTG
TAAAGATCGACTCACCGAACTGTCAGCGGTAGAAATGTGCACCCAAGGCATGCATTACAAAAATGAAGTAATTTACGTACAGAATATTAGTCACCTGCCATTTGGCCGTT
CCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCGCGAATTCCATTAGAGCTCAGTATGAAGGACTGCCGCAAACTACTTTCATGTCCACTAAGTCGTACACCAAGAGAATCGATAACTTGAGAATGCCACTTGGGTA
CCAACCTCCAAAATTCCAACAATTCGATGGAAAGGGCAACCCAAAGCAACATATCGCCCACTTTGTCGAAACATGTGAGAATGCAGGATCAAGAGAAGACCAACTTGTCA
GGCAATTCGTTCAAAGCTTGAAAGGAAATGCCTTCGAGTGGTACACCGATCTAGAGCCAGAAGTCATTGACAGCTGGGAACAATTAGAAAAGGAGTTCCTCAACCGTTTC
TATAGCACCAAACGTACCGTAAGCATGATGGAGCTTACAAACACCAAACAGCGGAAGGGAGAGCCAGTCATCGATTACATAAACCGATGGAGAGCACTAAGTCTTGACTG
TAAAGATCGACTCACCGAACTGTCAGCGGTAGAAATGTGCACCCAAGGCATGCATTACAAAAATGAAGTAATTTACGTACAGAATATTAGTCACCTGCCATTTGGCCGTT
CCTAG
Protein sequenceShow/hide protein sequence
MTANSIRAQYEGLPQTTFMSTKSYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSREDQLVRQFVQSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRF
YSTKRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHYKNEVIYVQNISHLPFGRS