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Pay0014569 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0014569
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr11:23371483..23371878
RNA-Seq ExpressionPay0014569
SyntenyPay0014569
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038364.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.1e-5280.77Show/hide
Query:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN
        MAKEIEAMERTNTW +VS  KDHH VG KWVYKVKC LDGT+DRYKARLVAKGYNQQEGIDF D FS VAKIVTVK FLALATSYNWSF+QMDINN FLN
Subjt:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN

Query:  GELFEEVHMSLPLGYQTSQSTKKRRKIGLQ
         +LFEEVHMSLPLGYQTSQ   K  K+  +
Subjt:  GELFEEVHMSLPLGYQTSQSTKKRRKIGLQ

KAA0043630.1 Reverse transcriptase, RNA-dependent DNA polymerase [Cucumis melo var. makuwa]1.1e-5282.68Show/hide
Query:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN
        MA+EIEAMERTNTWTIVS PK++HTVGSKWVYKVK K  GT+DRYKARL+AKGYNQQEGIDF DTFSLVAKIVTVKIFLAL  SYNWSFTQMDINN FLN
Subjt:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN

Query:  GELFEEVHMSLPLGYQTSQSTKKRRKI
        G+LFEEV MSLPLGYQTSQ  +   K+
Subjt:  GELFEEVHMSLPLGYQTSQSTKKRRKI

KAA0046892.1 Reverse transcriptase, RNA-dependent DNA polymerase [Cucumis melo var. makuwa]5.9e-5182.11Show/hide
Query:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN
        M +EIEAMERTNT T+VS P +HHTVGSKWVYKVKCKL+GTI+RYKARLVAKGYNQQEG+DF  TFS VAKIVTVK FLA +TSYNWS TQMDINN FLN
Subjt:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN

Query:  GELFEEVHMSLPLGYQTSQSTKK
        G+LFEEVHMSLPLGYQTSQ  +K
Subjt:  GELFEEVHMSLPLGYQTSQSTKK

XP_016901937.1 PREDICTED: uncharacterized mitochondrial protein AtMg00820-like [Cucumis melo]6.9e-68100Show/hide
Query:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN
        MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN
Subjt:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN

Query:  GELFEEVHMSLPLGYQTSQSTKKRRKIGLQT
        GELFEEVHMSLPLGYQTSQSTKKRRKIGLQT
Subjt:  GELFEEVHMSLPLGYQTSQSTKKRRKIGLQT

XP_038879273.1 uncharacterized mitochondrial protein AtMg00810-like [Benincasa hispida]5.3e-5281.1Show/hide
Query:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN
        MA+EIEAMERTNTWTIVS PK+HHT+GSKWVYKVK K DGT+D+YKARLVAK YNQQE IDF DTFS +AKIVTVK+F ALATSYNWS TQMDINN FLN
Subjt:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN

Query:  GELFEEVHMSLPLGYQTSQSTKKRRKI
        G+LFEEVHMSLPLGYQTSQ   K  K+
Subjt:  GELFEEVHMSLPLGYQTSQSTKKRRKI

TrEMBL top hitse value%identityAlignment
A0A1S4E133 uncharacterized mitochondrial protein AtMg00820-like3.3e-68100Show/hide
Query:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN
        MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN
Subjt:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN

Query:  GELFEEVHMSLPLGYQTSQSTKKRRKIGLQT
        GELFEEVHMSLPLGYQTSQSTKKRRKIGLQT
Subjt:  GELFEEVHMSLPLGYQTSQSTKKRRKIGLQT

A0A5A7SYT6 Rhodanese-like domain-containing protein 6 isoform X26.3e-5183.87Show/hide
Query:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTID-RYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFL
        MA+EIEAMERTNTWTIVS  K+HHTVGSKWVYKVK K DGT+D RYKARLVAKGY QQEGIDFLDTFS VAKIVTVK+FLAL  SYNWS TQMDINN FL
Subjt:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTID-RYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFL

Query:  NGELFEEVHMSLPLGYQTSQSTKK
        NG+LFEEVHMSLPLGY+TSQ  +K
Subjt:  NGELFEEVHMSLPLGYQTSQSTKK

A0A5A7T4H5 Putative mitochondrial protein1.5e-5280.77Show/hide
Query:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN
        MAKEIEAMERTNTW +VS  KDHH VG KWVYKVKC LDGT+DRYKARLVAKGYNQQEGIDF D FS VAKIVTVK FLALATSYNWSF+QMDINN FLN
Subjt:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN

Query:  GELFEEVHMSLPLGYQTSQSTKKRRKIGLQ
         +LFEEVHMSLPLGYQTSQ   K  K+  +
Subjt:  GELFEEVHMSLPLGYQTSQSTKKRRKIGLQ

A0A5A7TK43 Reverse transcriptase, RNA-dependent DNA polymerase5.2e-5382.68Show/hide
Query:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN
        MA+EIEAMERTNTWTIVS PK++HTVGSKWVYKVK K  GT+DRYKARL+AKGYNQQEGIDF DTFSLVAKIVTVKIFLAL  SYNWSFTQMDINN FLN
Subjt:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN

Query:  GELFEEVHMSLPLGYQTSQSTKKRRKI
        G+LFEEV MSLPLGYQTSQ  +   K+
Subjt:  GELFEEVHMSLPLGYQTSQSTKKRRKI

A0A5D3BYJ4 Reverse transcriptase, RNA-dependent DNA polymerase2.8e-5182.11Show/hide
Query:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN
        M +EIEAMERTNT T+VS P +HHTVGSKWVYKVKCKL+GTI+RYKARLVAKGYNQQEG+DF  TFS VAKIVTVK FLA +TSYNWS TQMDINN FLN
Subjt:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN

Query:  GELFEEVHMSLPLGYQTSQSTKK
        G+LFEEVHMSLPLGYQTSQ  +K
Subjt:  GELFEEVHMSLPLGYQTSQSTKK

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.5e-2045.05Show/hide
Query:  EIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLNGEL
        E+ A +  NTWTI   P++ + V S+WV+ VK    G   RYKARLVA+G+ Q+  ID+ +TF+ VA+I + +  L+L   YN    QMD+   FLNG L
Subjt:  EIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLNGEL

Query:  FEEVHMSLPLG
         EE++M LP G
Subjt:  FEEVHMSLPLG

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.1e-2038.98Show/hide
Query:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN
        M +E+E++++  T+ +V  PK    +  KWV+K+K   D  + RYKARLV KG+ Q++GIDF + FS V K+ +++  L+LA S +    Q+D+   FL+
Subjt:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN

Query:  GELFEEVHMSLPLGYQTS
        G+L EE++M  P G++ +
Subjt:  GELFEEVHMSLPLGYQTS

P92520 Uncharacterized mitochondrial protein AtMg008205.8e-1744.21Show/hide
Query:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALA------TSYNWSF
        M +E++A+ R  TW +V  P + + +G KWV+K K   DGT+DR KARLVAKG++Q+EGI F++T+S V +  T++  L +A       S NW F
Subjt:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALA------TSYNWSF

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.2e-2445.69Show/hide
Query:  MAKEIEAMERTNTWTIVSFPKDHHT-VGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFL
        M  EI A    +TW +V  P  H T VG +W++  K   DG+++RYKARLVAKGYNQ+ G+D+ +TFS V K  +++I L +A   +W   Q+D+NN FL
Subjt:  MAKEIEAMERTNTWTIVSFPKDHHT-VGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFL

Query:  NGELFEEVHMSLPLGY
         G L ++V+MS P G+
Subjt:  NGELFEEVHMSLPLGY

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.4e-2345.69Show/hide
Query:  MAKEIEAMERTNTWTIVSFPKDHHT-VGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFL
        M  EI A    +TW +V  P    T VG +W++  K   DG+++RYKARLVAKGYNQ+ G+D+ +TFS V K  +++I L +A   +W   Q+D+NN FL
Subjt:  MAKEIEAMERTNTWTIVSFPKDHHT-VGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFL

Query:  NGELFEEVHMSLPLGY
         G L +EV+MS P G+
Subjt:  NGELFEEVHMSLPLGY

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.2e-3557.14Show/hide
Query:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN
        M  EI AME T+TW I + P +   +G KWVYK+K   DGTI+RYKARLVAKGY QQEGIDF++TFS V K+ +VK+ LA++  YN++  Q+DI+N FLN
Subjt:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLN

Query:  GELFEEVHMSLPLGYQTSQ
        G+L EE++M LP GY   Q
Subjt:  GELFEEVHMSLPLGYQTSQ

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)4.1e-1844.21Show/hide
Query:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALA------TSYNWSF
        M +E++A+ R  TW +V  P + + +G KWV+K K   DGT+DR KARLVAKG++Q+EGI F++T+S V +  T++  L +A       S NW F
Subjt:  MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALA------TSYNWSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAGAAATAGAAGCTATGGAAAGAACGAATACATGGACCATTGTTTCCTTCCCAAAAGATCATCACACCGTTGGTAGTAAATGGGTGTACAAGGTGAAGTGTAA
ACTGGATGGCACCATTGATAGATACAAGGCAAGACTTGTAGCAAAGGGCTATAATCAACAAGAAGGGATAGATTTTTTAGATACCTTCTCACTAGTGGCTAAAATAGTTA
CTGTTAAGATATTCTTAGCTCTTGCTACATCCTATAATTGGTCTTTTACCCAAATGGACATAAATAATGTCTTCTTAAATGGAGAATTGTTTGAAGAAGTGCACATGTCC
TTACCTTTGGGCTACCAAACTTCTCAAAGTACCAAGAAAAGGAGAAAGATTGGCTTGCAAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAAGAAATAGAAGCTATGGAAAGAACGAATACATGGACCATTGTTTCCTTCCCAAAAGATCATCACACCGTTGGTAGTAAATGGGTGTACAAGGTGAAGTGTAA
ACTGGATGGCACCATTGATAGATACAAGGCAAGACTTGTAGCAAAGGGCTATAATCAACAAGAAGGGATAGATTTTTTAGATACCTTCTCACTAGTGGCTAAAATAGTTA
CTGTTAAGATATTCTTAGCTCTTGCTACATCCTATAATTGGTCTTTTACCCAAATGGACATAAATAATGTCTTCTTAAATGGAGAATTGTTTGAAGAAGTGCACATGTCC
TTACCTTTGGGCTACCAAACTTCTCAAAGTACCAAGAAAAGGAGAAAGATTGGCTTGCAAACTTAA
Protein sequenceShow/hide protein sequence
MAKEIEAMERTNTWTIVSFPKDHHTVGSKWVYKVKCKLDGTIDRYKARLVAKGYNQQEGIDFLDTFSLVAKIVTVKIFLALATSYNWSFTQMDINNVFLNGELFEEVHMS
LPLGYQTSQSTKKRRKIGLQT