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Pay0014698 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0014698
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionCCR4-NOT transcription complex subunit 1 isoform X2
Genome locationchr04:26902503..26925028
RNA-Seq ExpressionPay0014698
SyntenyPay0014698
Gene Ontology termsGO:0006417 - regulation of translation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053677.1 CCR4-NOT transcription complex subunit 1 isoform X1 [Cucumis melo var. makuwa]9.7e-06100Show/hide
Query:  MSSLNQVELPLEVATPSNSGNHTHPLSQV
        MSSLNQVELPLEVATPSNSGNHTHPLSQV
Subjt:  MSSLNQVELPLEVATPSNSGNHTHPLSQV
KAA0053680.1 CCR4-NOT transcription complex subunit 1 isoform X2 [Cucumis melo var. makuwa]2.2e-1375.81Show/hide
Query:  MDQDEDEAARMEECSFEMSCHLQLYCLRVIYSEGERKYKDITLDLVRNELLNLAEYNVHMVK
        M QDEDEAARMEECS             VIYSEGERKY DITLDLVRNELLNLAEYNVHMVK
Subjt:  MDQDEDEAARMEECSFEMSCHLQLYCLRVIYSEGERKYKDITLDLVRNELLNLAEYNVHMVK
KAA0062082.1 CCR4-NOT transcription complex subunit 1 isoform X1 [Cucumis melo var. makuwa]7.2e-0973.91Show/hide
Query:  MSCHLQLYCLRVIYSEGERKY-KDITLDLVRNELLNLAEYNVHMVK
        MSCHLQLYCL+VIY + ERKY KDITL L+ +ELLNL EYNVH+ K
Subjt:  MSCHLQLYCLRVIYSEGERKY-KDITLDLVRNELLNLAEYNVHMVK
TYK04937.1 CCR4-NOT transcription complex subunit 1 isoform X1 [Cucumis melo var. makuwa]2.7e-0871.74Show/hide
Query:  MSCHLQLYCLRVIYSEGERKY-KDITLDLVRNELLNLAEYNVHMVK
        MSCHLQLYCL+VIY + ERKY KDITL L+ +ELLNL EY+VH+ K
Subjt:  MSCHLQLYCLRVIYSEGERKY-KDITLDLVRNELLNLAEYNVHMVK
XP_016899759.1 PREDICTED: uncharacterized protein LOC103487079 [Cucumis melo]1.1e-4475.71Show/hide
Query:  MSSLNQVELPLEVATPSNSGNHTHPLSQ-----------------VLSQKFKSAYTSYINDFRRYMDQDEDEAARMEECSFEMSCHLQLYCLRVIYSEGE
        MSSLNQVELPLEVATPSNSGNHTHPLSQ                  +SQKFKSAYTSYINDFRRYM QDEDEAARMEECS             VIYSEGE
Subjt:  MSSLNQVELPLEVATPSNSGNHTHPLSQ-----------------VLSQKFKSAYTSYINDFRRYMDQDEDEAARMEECSFEMSCHLQLYCLRVIYSEGE

Query:  RKYKDITLDLVRNELLNLAEYNVHMVKRLRQSLLYPSSKP
        RKY DITLDLVRNELLNLAEYNVHMVKRLRQSLLYPSSKP
Subjt:  RKYKDITLDLVRNELLNLAEYNVHMVKRLRQSLLYPSSKP
TrEMBL top hitse value%identityAlignment
A0A1S4DUV0 uncharacterized protein LOC1034870795.2e-4575.71Show/hide
Query:  MSSLNQVELPLEVATPSNSGNHTHPLSQ-----------------VLSQKFKSAYTSYINDFRRYMDQDEDEAARMEECSFEMSCHLQLYCLRVIYSEGE
        MSSLNQVELPLEVATPSNSGNHTHPLSQ                  +SQKFKSAYTSYINDFRRYM QDEDEAARMEECS             VIYSEGE
Subjt:  MSSLNQVELPLEVATPSNSGNHTHPLSQ-----------------VLSQKFKSAYTSYINDFRRYMDQDEDEAARMEECSFEMSCHLQLYCLRVIYSEGE

Query:  RKYKDITLDLVRNELLNLAEYNVHMVKRLRQSLLYPSSKP
        RKY DITLDLVRNELLNLAEYNVHMVKRLRQSLLYPSSKP
Subjt:  RKYKDITLDLVRNELLNLAEYNVHMVKRLRQSLLYPSSKP
A0A5A7UEP8 CCR4-NOT transcription complex subunit 1 isoform X21.0e-1375.81Show/hide
Query:  MDQDEDEAARMEECSFEMSCHLQLYCLRVIYSEGERKYKDITLDLVRNELLNLAEYNVHMVK
        M QDEDEAARMEECS             VIYSEGERKY DITLDLVRNELLNLAEYNVHMVK
Subjt:  MDQDEDEAARMEECSFEMSCHLQLYCLRVIYSEGERKYKDITLDLVRNELLNLAEYNVHMVK
A0A5A7V1K2 CCR4-NOT transcription complex subunit 1 isoform X13.5e-0973.91Show/hide
Query:  MSCHLQLYCLRVIYSEGERKY-KDITLDLVRNELLNLAEYNVHMVK
        MSCHLQLYCL+VIY + ERKY KDITL L+ +ELLNL EYNVH+ K
Subjt:  MSCHLQLYCLRVIYSEGERKY-KDITLDLVRNELLNLAEYNVHMVK
A0A5D3BZF9 CCR4-NOT transcription complex subunit 1 isoform X11.3e-0871.74Show/hide
Query:  MSCHLQLYCLRVIYSEGERKY-KDITLDLVRNELLNLAEYNVHMVK
        MSCHLQLYCL+VIY + ERKY KDITL L+ +ELLNL EY+VH+ K
Subjt:  MSCHLQLYCLRVIYSEGERKY-KDITLDLVRNELLNLAEYNVHMVK
A0A5D3CPZ5 CCR4-NOT transcription complex subunit 1 isoform X14.7e-06100Show/hide
Query:  MSSLNQVELPLEVATPSNSGNHTHPLSQV
        MSSLNQVELPLEVATPSNSGNHTHPLSQV
Subjt:  MSSLNQVELPLEVATPSNSGNHTHPLSQV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02080.1 transcription regulators2.7e-0667.57Show/hide
Query:  VIYSEGERKY-KDITLDLVRNELLNLAEYNVHMVKRL
        VIYSE +RK  KDIT+ L++ ELL+LAEYNVHM K L
Subjt:  VIYSEGERKY-KDITLDLVRNELLNLAEYNVHMVKRL
AT1G02080.2 transcription regulators2.7e-0667.57Show/hide
Query:  VIYSEGERKY-KDITLDLVRNELLNLAEYNVHMVKRL
        VIYSE +RK  KDIT+ L++ ELL+LAEYNVHM K L
Subjt:  VIYSEGERKY-KDITLDLVRNELLNLAEYNVHMVKRL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTTTGAATCAAGTGGAGCTCCCGCTAGAGGTTGCAACACCATCAAATTCTGGAAATCATACTCACCCGTTATCTCAGGTTCTTAGCCAAAAATTTAAGTCGGC
ATACACAAGCTACATAAATGATTTTCGACGGTATATGGACCAAGATGAAGATGAAGCGGCAAGGATGGAGGAATGCTCTTTTGAAATGTCATGTCATCTACAACTTTATT
GTTTACGGGTGATTTACTCTGAGGGAGAACGGAAGTACAAGGACATCACTCTTGACCTTGTTCGCAATGAATTATTAAATCTTGCAGAGTATAATGTTCATATGGTGAAA
AGGCTGCGACAGAGTTTGCTATATCCCTCCTCCAAACCTTTGTTGTGGATGAATCGAGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCTTTGAATCAAGTGGAGCTCCCGCTAGAGGTTGCAACACCATCAAATTCTGGAAATCATACTCACCCGTTATCTCAGGTTCTTAGCCAAAAATTTAAGTCGGC
ATACACAAGCTACATAAATGATTTTCGACGGTATATGGACCAAGATGAAGATGAAGCGGCAAGGATGGAGGAATGCTCTTTTGAAATGTCATGTCATCTACAACTTTATT
GTTTACGGGTGATTTACTCTGAGGGAGAACGGAAGTACAAGGACATCACTCTTGACCTTGTTCGCAATGAATTATTAAATCTTGCAGAGTATAATGTTCATATGGTGAAA
AGGCTGCGACAGAGTTTGCTATATCCCTCCTCCAAACCTTTGTTGTGGATGAATCGAGTGTAA
Protein sequenceShow/hide protein sequence
MSSLNQVELPLEVATPSNSGNHTHPLSQVLSQKFKSAYTSYINDFRRYMDQDEDEAARMEECSFEMSCHLQLYCLRVIYSEGERKYKDITLDLVRNELLNLAEYNVHMVK
RLRQSLLYPSSKPLLWMNRV