; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0014702 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0014702
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr07:22222546..22225814
RNA-Seq ExpressionPay0014702
SyntenyPay0014702
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051440.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.0e-10738.24Show/hide
Query:  LEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSVSTIKYKLFHKE-YFN------------------------
        LEVEPLGS+LSVSTPS +V+LSKEKIKAC+VE+ANH+LDVTLLVLDM+  DVIL MDWLS +      F KE  FN                        
Subjt:  LEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSVSTIKYKLFHKE-YFN------------------------

Query:  --SSML--GTWSILASVVDTKELKVSLSSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKLQ--------------
          S +L  GTW ILASVVDT+E +VSLSS+L+VREYPDVFP+ELPGLPP REIDFAIELEP   PISRAPYRMA A+LKEL V+LQ              
Subjt:  --SSML--GTWSILASVVDTKELKVSLSSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKLQ--------------

Query:  ---------------------------NFGHYELIVMSFGLTNAPA------------------------------TEAEHEEHLHQ-------------
                                    +GHYE IVMSFGLTNAPA                              TEAEHE+HLHQ             
Subjt:  ---------------------------NFGHYELIVMSFGLTNAPA------------------------------TEAEHEEHLHQ-------------

Query:  ---------KVSFIGHVVSSKGVSVKPAKIEVVTSL----------------------------------------------------------------
                 KV+F+GHVVSS+GVSV P KIE VT+                                                                 
Subjt:  ---------KVSFIGHVVSSKGVSVKPAKIEVVTSL----------------------------------------------------------------

Query:  NLLQKVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKFSVPPNDGLMLKRCLCIPANSAVK
         L +KV+HSAA IT+QA L RDF+R EIAVSVGE+TSQLAQLSVQPTLRQKIIV QLN PYLVEKR L +  Q   FS+  NDGLM +  LC+P +SAVK
Subjt:  NLLQKVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKFSVPPNDGLMLKRCLCIPANSAVK

Query:  AKLLTEAHSSPFFMHPSSTKKVAD----------------------------------------------------------------------------
         +LLTEAH SPF MHP +T +V                                                                              
Subjt:  AKLLTEAHSSPFFMHPSSTKKVAD----------------------------------------------------------------------------

Query:  -------FVSKC-----------------------------------------------------------LVCHQVAPMNGVLRFEKKRKLSPRFIGPF
                  KC                                                           +V  +VAPM GVLRFEKK KLSPRF+GPF
Subjt:  -------FVSKC-----------------------------------------------------------LVCHQVAPMNGVLRFEKKRKLSPRFIGPF

Query:  EIIEQIDPVAYHLALTPSFSTVHDVF---------------------------LYVEQ------------------------RNHEAEEATYEREDGMRA
        EI+E+I PVAY LAL PSFS +HDVF                            Y EQ                        RNH   E T+ERE+ MRA
Subjt:  EIIEQIDPVAYHLALTPSFSTVHDVF---------------------------LYVEQ------------------------RNHEAEEATYEREDGMRA

Query:  QYLELFEN
         Y ELFE+
Subjt:  QYLELFEN

KAA0063028.1 pol protein [Cucumis melo var. makuwa]6.4e-16357.28Show/hide
Query:  MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSVSTIKYKLFHKEYFNSSMLGTWSILASVVDTKELKVSL
        MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSV+        KE       GTWSILASVVDTKELKVSL
Subjt:  MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSVSTIKYKLFHKEYFNSSMLGTWSILASVVDTKELKVSL

Query:  SSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKLQNFGHYELIVMSFGLTNAPATEAEHEEHLHQ-----------
        SSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALA+LKEL VKLQNFGHYELIVMSFGLTNAPA E E+EEHLHQ           
Subjt:  SSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKLQNFGHYELIVMSFGLTNAPATEAEHEEHLHQ-----------

Query:  -----------KVSFIGHVVSSKGVSVKPAKIEVVTS----LNLL-------------------------------------------------------
                   KVSFIGHVVSS+GV V PAKIE +TS    L L+                                                       
Subjt:  -----------KVSFIGHVVSSKGVSVKPAKIEVVTS----LNLL-------------------------------------------------------

Query:  ------------QKVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKFSVPPNDGLMLKRCL
                    +KVSHSAA ITEQAHLRRDF+RD+IAVSVGELTSQLAQLSVQPTLRQKIIV QLNDPYLVEKRHLAKAEQDEKFS+PPNDGLMLKRCL
Subjt:  ------------QKVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKFSVPPNDGLMLKRCL

Query:  CIPANSAVKAKLLTEAHSSPFFMHPSSTK----------------KVADFV--SKCL-------------------------------------------
        CIPANSAVKAKLLTEAHSSPFFMHPSSTK                KVADFV  SK L                                           
Subjt:  CIPANSAVKAKLLTEAHSSPFFMHPSSTK----------------KVADFV--SKCL-------------------------------------------

Query:  --------------------------------------------------------------------------------VCHQVAPMNGVLRFEKKRKL
                                                                                        V  +VAPMNGVLRFEKKRKL
Subjt:  --------------------------------------------------------------------------------VCHQVAPMNGVLRFEKKRKL

Query:  SPRFIGPFEIIEQIDPVAYHLALTPSFSTVHDVFLYVEQ
        SPRFIGPFEIIEQIDPVAY LALTPSFSTVHDVFLYVEQ
Subjt:  SPRFIGPFEIIEQIDPVAYHLALTPSFSTVHDVFLYVEQ

TYK07497.1 putative Retrotransposon protein [Cucumis melo var. makuwa]2.6e-10360.7Show/hide
Query:  MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSVSTIKYKLFHKEYFNSSMLGTWSILASVVDTKELKVSL
        MCLEV+ LGSILSVST S +VMLSK+KIKAC+VE+ NHVLDVTLLVLD+R FDVIL MDWLSV+        KE              SVVDT+E +VSL
Subjt:  MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSVSTIKYKLFHKEYFNSSMLGTWSILASVVDTKELKVSL

Query:  SSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKL-QNFGHYELIVMSFGLTNAPATEAEHEEHLHQKVSFIGHVVS
        SSK +VREYPDVFP+EL  LPP REIDFAIE+EP   PIS+APYRMA A+L+EL   +   + HYE +V+SFGLTNAPA      + +++KVSF+GHVVS
Subjt:  SSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKL-QNFGHYELIVMSFGLTNAPATEAEHEEHLHQKVSFIGHVVS

Query:  SKGVSVKPAKIEVVTSL------NLLQKVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKF
        S+GVSV P KIEVVTSL      + ++KVSHSA  IT+QA L RDF+R +I VS+GE++S LAQLSVQ TLRQKIIV QLND YLVEKR LA+A+Q ++F
Subjt:  SKGVSVKPAKIEVVTSL------NLLQKVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKF

Query:  SVPPNDGLMLKRCLCIPANSAVKAKLLTEAHSSPFFMHPSSTK----------------KVADFVSKCLVCHQV
         +   D LM +R LCIPA+SA+K KLLTEAHSS FF+H  STK                +VADFVS CLVC +V
Subjt:  SVPPNDGLMLKRCLCIPANSAVKAKLLTEAHSSPFFMHPSSTK----------------KVADFVSKCLVCHQV

TYK16320.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]3.2e-13869.6Show/hide
Query:  MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSVSTIKYKLFHKEYFNSSMLGTWSILASVVDTKELKVSL
        MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVIL+MDWLSV+       HKE       GTWSILASVVDTKELKVSL
Subjt:  MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSVSTIKYKLFHKEYFNSSMLGTWSILASVVDTKELKVSL

Query:  SSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKLQNFGHYELIVMSFGLTNAPA---------------------T
        SSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKLQ       I  S     AP                       
Subjt:  SSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKLQNFGHYELIVMSFGLTNAPA---------------------T

Query:  EAEHEEHLHQ----------------------KVSFIGHVVSSKGVSVKPAKIEVVTS----LNLL----------------------------------
        E E++EHLHQ                      KVSFIGHVVSS+GV V P KIE VTS    L L+                                  
Subjt:  EAEHEEHLHQ----------------------KVSFIGHVVSSKGVSVKPAKIEVVTS----LNLL----------------------------------

Query:  QKVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKFSVPPNDGLMLKRCLCIPANSAVKAKL
        +KVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKFS+PPNDGLMLKRCLCIPANSAVKAKL
Subjt:  QKVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKFSVPPNDGLMLKRCLCIPANSAVKAKL

Query:  LTEAHSSPFFMHPSSTKKVAD
        LTEAHSSPFFMHPSSTK   D
Subjt:  LTEAHSSPFFMHPSSTKKVAD

XP_016901149.1 PREDICTED: uncharacterized protein LOC103493238 [Cucumis melo]1.2e-21488.25Show/hide
Query:  MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSVSTIKYKLFHKEYFNSSMLGTWSILASVVDTKELKVSL
        MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVIL+MDWLSV+       HKE       GTWSILASVVDTKELKVSL
Subjt:  MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSVSTIKYKLFHKEYFNSSMLGTWSILASVVDTKELKVSL

Query:  SSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKLQNFGHYELIVMSFGLTNAPATEAEHEEHLHQKVSFIGHVVSS
        SSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKLQNFG+YELIVMSFGLTNAPA E E++EHLHQKVSFIGHVVSS
Subjt:  SSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKLQNFGHYELIVMSFGLTNAPATEAEHEEHLHQKVSFIGHVVSS

Query:  KGVSVKPAKIEVVTS----LNLLQKVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKFSVP
        +GV V P KIE VTS    L L++KVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKFS+P
Subjt:  KGVSVKPAKIEVVTS----LNLLQKVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKFSVP

Query:  PNDGLMLKRCLCIPANSAVKAKLLTEAHSSPFFMHPSSTK----------------KVADFVSKCLVCHQVAPMNGVLRFEKKRKLSPRFIGPFEIIEQI
        PNDGLMLKRCLCIPANSAVKAKLLTEAHSSPFFMHPSSTK                +VADFVSKCLVCHQVAPMNGVLRFEKKRKLSP FIGPFEIIEQI
Subjt:  PNDGLMLKRCLCIPANSAVKAKLLTEAHSSPFFMHPSSTK----------------KVADFVSKCLVCHQVAPMNGVLRFEKKRKLSPRFIGPFEIIEQI

Query:  DPVAYHLALTPSFSTVHDVFLYVEQRNHEAEEATYEREDGMRAQYLELFEN
        DPVAYHLALTPSFSTVHDVFLYVEQRNHEA+EATYEREDGMRAQYLELFEN
Subjt:  DPVAYHLALTPSFSTVHDVFLYVEQRNHEAEEATYEREDGMRAQYLELFEN

TrEMBL top hitse value%identityAlignment
A0A1S4DYU5 uncharacterized protein LOC1034932386.0e-21588.25Show/hide
Query:  MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSVSTIKYKLFHKEYFNSSMLGTWSILASVVDTKELKVSL
        MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVIL+MDWLSV+       HKE       GTWSILASVVDTKELKVSL
Subjt:  MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSVSTIKYKLFHKEYFNSSMLGTWSILASVVDTKELKVSL

Query:  SSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKLQNFGHYELIVMSFGLTNAPATEAEHEEHLHQKVSFIGHVVSS
        SSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKLQNFG+YELIVMSFGLTNAPA E E++EHLHQKVSFIGHVVSS
Subjt:  SSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKLQNFGHYELIVMSFGLTNAPATEAEHEEHLHQKVSFIGHVVSS

Query:  KGVSVKPAKIEVVTS----LNLLQKVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKFSVP
        +GV V P KIE VTS    L L++KVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKFS+P
Subjt:  KGVSVKPAKIEVVTS----LNLLQKVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKFSVP

Query:  PNDGLMLKRCLCIPANSAVKAKLLTEAHSSPFFMHPSSTK----------------KVADFVSKCLVCHQVAPMNGVLRFEKKRKLSPRFIGPFEIIEQI
        PNDGLMLKRCLCIPANSAVKAKLLTEAHSSPFFMHPSSTK                +VADFVSKCLVCHQVAPMNGVLRFEKKRKLSP FIGPFEIIEQI
Subjt:  PNDGLMLKRCLCIPANSAVKAKLLTEAHSSPFFMHPSSTK----------------KVADFVSKCLVCHQVAPMNGVLRFEKKRKLSPRFIGPFEIIEQI

Query:  DPVAYHLALTPSFSTVHDVFLYVEQRNHEAEEATYEREDGMRAQYLELFEN
        DPVAYHLALTPSFSTVHDVFLYVEQRNHEA+EATYEREDGMRAQYLELFEN
Subjt:  DPVAYHLALTPSFSTVHDVFLYVEQRNHEAEEATYEREDGMRAQYLELFEN

A0A5A7U8E6 Ty3-gypsy retrotransposon protein4.9e-10838.24Show/hide
Query:  LEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSVSTIKYKLFHKE-YFN------------------------
        LEVEPLGS+LSVSTPS +V+LSKEKIKAC+VE+ANH+LDVTLLVLDM+  DVIL MDWLS +      F KE  FN                        
Subjt:  LEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSVSTIKYKLFHKE-YFN------------------------

Query:  --SSML--GTWSILASVVDTKELKVSLSSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKLQ--------------
          S +L  GTW ILASVVDT+E +VSLSS+L+VREYPDVFP+ELPGLPP REIDFAIELEP   PISRAPYRMA A+LKEL V+LQ              
Subjt:  --SSML--GTWSILASVVDTKELKVSLSSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKLQ--------------

Query:  ---------------------------NFGHYELIVMSFGLTNAPA------------------------------TEAEHEEHLHQ-------------
                                    +GHYE IVMSFGLTNAPA                              TEAEHE+HLHQ             
Subjt:  ---------------------------NFGHYELIVMSFGLTNAPA------------------------------TEAEHEEHLHQ-------------

Query:  ---------KVSFIGHVVSSKGVSVKPAKIEVVTSL----------------------------------------------------------------
                 KV+F+GHVVSS+GVSV P KIE VT+                                                                 
Subjt:  ---------KVSFIGHVVSSKGVSVKPAKIEVVTSL----------------------------------------------------------------

Query:  NLLQKVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKFSVPPNDGLMLKRCLCIPANSAVK
         L +KV+HSAA IT+QA L RDF+R EIAVSVGE+TSQLAQLSVQPTLRQKIIV QLN PYLVEKR L +  Q   FS+  NDGLM +  LC+P +SAVK
Subjt:  NLLQKVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKFSVPPNDGLMLKRCLCIPANSAVK

Query:  AKLLTEAHSSPFFMHPSSTKKVAD----------------------------------------------------------------------------
         +LLTEAH SPF MHP +T +V                                                                              
Subjt:  AKLLTEAHSSPFFMHPSSTKKVAD----------------------------------------------------------------------------

Query:  -------FVSKC-----------------------------------------------------------LVCHQVAPMNGVLRFEKKRKLSPRFIGPF
                  KC                                                           +V  +VAPM GVLRFEKK KLSPRF+GPF
Subjt:  -------FVSKC-----------------------------------------------------------LVCHQVAPMNGVLRFEKKRKLSPRFIGPF

Query:  EIIEQIDPVAYHLALTPSFSTVHDVF---------------------------LYVEQ------------------------RNHEAEEATYEREDGMRA
        EI+E+I PVAY LAL PSFS +HDVF                            Y EQ                        RNH   E T+ERE+ MRA
Subjt:  EIIEQIDPVAYHLALTPSFSTVHDVF---------------------------LYVEQ------------------------RNHEAEEATYEREDGMRA

Query:  QYLELFEN
         Y ELFE+
Subjt:  QYLELFEN

A0A5A7V5Y4 Pol protein3.1e-16357.28Show/hide
Query:  MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSVSTIKYKLFHKEYFNSSMLGTWSILASVVDTKELKVSL
        MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSV+        KE       GTWSILASVVDTKELKVSL
Subjt:  MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSVSTIKYKLFHKEYFNSSMLGTWSILASVVDTKELKVSL

Query:  SSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKLQNFGHYELIVMSFGLTNAPATEAEHEEHLHQ-----------
        SSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALA+LKEL VKLQNFGHYELIVMSFGLTNAPA E E+EEHLHQ           
Subjt:  SSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKLQNFGHYELIVMSFGLTNAPATEAEHEEHLHQ-----------

Query:  -----------KVSFIGHVVSSKGVSVKPAKIEVVTS----LNLL-------------------------------------------------------
                   KVSFIGHVVSS+GV V PAKIE +TS    L L+                                                       
Subjt:  -----------KVSFIGHVVSSKGVSVKPAKIEVVTS----LNLL-------------------------------------------------------

Query:  ------------QKVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKFSVPPNDGLMLKRCL
                    +KVSHSAA ITEQAHLRRDF+RD+IAVSVGELTSQLAQLSVQPTLRQKIIV QLNDPYLVEKRHLAKAEQDEKFS+PPNDGLMLKRCL
Subjt:  ------------QKVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKFSVPPNDGLMLKRCL

Query:  CIPANSAVKAKLLTEAHSSPFFMHPSSTK----------------KVADFV--SKCL-------------------------------------------
        CIPANSAVKAKLLTEAHSSPFFMHPSSTK                KVADFV  SK L                                           
Subjt:  CIPANSAVKAKLLTEAHSSPFFMHPSSTK----------------KVADFV--SKCL-------------------------------------------

Query:  --------------------------------------------------------------------------------VCHQVAPMNGVLRFEKKRKL
                                                                                        V  +VAPMNGVLRFEKKRKL
Subjt:  --------------------------------------------------------------------------------VCHQVAPMNGVLRFEKKRKL

Query:  SPRFIGPFEIIEQIDPVAYHLALTPSFSTVHDVFLYVEQ
        SPRFIGPFEIIEQIDPVAY LALTPSFSTVHDVFLYVEQ
Subjt:  SPRFIGPFEIIEQIDPVAYHLALTPSFSTVHDVFLYVEQ

A0A5D3C6H3 Putative Retrotransposon protein1.2e-10360.7Show/hide
Query:  MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSVSTIKYKLFHKEYFNSSMLGTWSILASVVDTKELKVSL
        MCLEV+ LGSILSVST S +VMLSK+KIKAC+VE+ NHVLDVTLLVLD+R FDVIL MDWLSV+        KE              SVVDT+E +VSL
Subjt:  MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSVSTIKYKLFHKEYFNSSMLGTWSILASVVDTKELKVSL

Query:  SSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKL-QNFGHYELIVMSFGLTNAPATEAEHEEHLHQKVSFIGHVVS
        SSK +VREYPDVFP+EL  LPP REIDFAIE+EP   PIS+APYRMA A+L+EL   +   + HYE +V+SFGLTNAPA      + +++KVSF+GHVVS
Subjt:  SSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKL-QNFGHYELIVMSFGLTNAPATEAEHEEHLHQKVSFIGHVVS

Query:  SKGVSVKPAKIEVVTSL------NLLQKVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKF
        S+GVSV P KIEVVTSL      + ++KVSHSA  IT+QA L RDF+R +I VS+GE++S LAQLSVQ TLRQKIIV QLND YLVEKR LA+A+Q ++F
Subjt:  SKGVSVKPAKIEVVTSL------NLLQKVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKF

Query:  SVPPNDGLMLKRCLCIPANSAVKAKLLTEAHSSPFFMHPSSTK----------------KVADFVSKCLVCHQV
         +   D LM +R LCIPA+SA+K KLLTEAHSS FF+H  STK                +VADFVS CLVC +V
Subjt:  SVPPNDGLMLKRCLCIPANSAVKAKLLTEAHSSPFFMHPSSTK----------------KVADFVSKCLVCHQV

A0A5D3CY86 Retrotransposon protein, putative, Ty3-gypsy subclass1.6e-13869.6Show/hide
Query:  MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSVSTIKYKLFHKEYFNSSMLGTWSILASVVDTKELKVSL
        MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVIL+MDWLSV+       HKE       GTWSILASVVDTKELKVSL
Subjt:  MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSVSTIKYKLFHKEYFNSSMLGTWSILASVVDTKELKVSL

Query:  SSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKLQNFGHYELIVMSFGLTNAPA---------------------T
        SSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKLQ       I  S     AP                       
Subjt:  SSKLIVREYPDVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKLQNFGHYELIVMSFGLTNAPA---------------------T

Query:  EAEHEEHLHQ----------------------KVSFIGHVVSSKGVSVKPAKIEVVTS----LNLL----------------------------------
        E E++EHLHQ                      KVSFIGHVVSS+GV V P KIE VTS    L L+                                  
Subjt:  EAEHEEHLHQ----------------------KVSFIGHVVSSKGVSVKPAKIEVVTS----LNLL----------------------------------

Query:  QKVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKFSVPPNDGLMLKRCLCIPANSAVKAKL
        +KVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKFS+PPNDGLMLKRCLCIPANSAVKAKL
Subjt:  QKVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKFSVPPNDGLMLKRCLCIPANSAVKAKL

Query:  LTEAHSSPFFMHPSSTKKVAD
        LTEAHSSPFFMHPSSTK   D
Subjt:  LTEAHSSPFFMHPSSTKKVAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTTAGAGGTAGAACCATTGGGTAGTATACTATCTGTTTCTACTCCATCTAGTAAAGTTATGTTGTCCAAGGAAAAGATAAAAGCATGTCAAGTAGAGGTAGCAAA
TCATGTGTTAGATGTAACCTTGCTAGTTTTGGACATGCGATATTTTGATGTAATTCTAGACATGGATTGGTTGTCTGTCTCAACCATCAAGTATAAACTATTTCATAAGG
AGTATTTTAACTCCTCAATGCTAGGTACTTGGAGTATCTTGGCTAGCGTAGTAGACACCAAAGAGCTTAAAGTTTCCTTGTCATCTAAGCTGATAGTGAGAGAATATCCC
GACGTTTTTCCTAATGAGCTTCCAGGACTTCCACCTCTCAGAGAGATCGATTTTGCTATTGAGCTAGAGCCAAACATTGTTCCTATATCTAGAGCTCCTTATAGAATGGC
CCTAGCTAAGTTGAAAGAGCTAAATGTCAAGTTGCAGAACTTTGGGCACTATGAGCTCATTGTAATGTCCTTTGGTTTGACCAATGCTCCTGCAACTGAGGCTGAACATG
AAGAGCATTTGCATCAGAAGGTGTCTTTTATTGGCCATGTAGTATCTAGTAAGGGAGTCTCTGTAAAGCCAGCGAAGATTGAAGTTGTTACCAGCCTCAACCTTCTACAG
AAGGTGTCACATTCAGCAGCACATATTACTGAGCAAGCCCATTTGCGTAGAGACTTTGATAGAGATGAGATTGCAGTTTCAGTAGGGGAACTTACCTCACAGTTGGCTCA
GTTATCAGTGCAGCCAACTTTGAGACAGAAGATTATTGTTGATCAGCTAAATGATCCATATTTGGTTGAGAAGCGCCACCTTGCAAAAGCAGAGCAGGATGAGAAGTTCT
CCGTACCCCCTAATGATGGACTTATGCTTAAGAGGTGTTTATGCATCCCGGCAAACAGTGCAGTTAAGGCTAAGCTTTTGACTGAGGCCCATAGTTCTCCATTTTTTATG
CATCCTAGCAGTACAAAGAAAGTAGCAGACTTCGTTAGTAAGTGCTTGGTGTGCCATCAGGTAGCACCTATGAATGGTGTTTTGAGGTTTGAGAAGAAGAGAAAGCTAAG
TCCACGTTTTATAGGGCCATTTGAGATAATTGAACAGATTGACCCTGTAGCTTATCATTTGGCATTGACTCCATCGTTTTCTACAGTCCATGATGTATTTCTCTATGTTG
AGCAACGAAACCATGAAGCTGAAGAGGCCACATATGAGAGAGAGGATGGCATGAGAGCCCAGTACCTCGAGCTGTTCGAGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTTTAGAGGTAGAACCATTGGGTAGTATACTATCTGTTTCTACTCCATCTAGTAAAGTTATGTTGTCCAAGGAAAAGATAAAAGCATGTCAAGTAGAGGTAGCAAA
TCATGTGTTAGATGTAACCTTGCTAGTTTTGGACATGCGATATTTTGATGTAATTCTAGACATGGATTGGTTGTCTGTCTCAACCATCAAGTATAAACTATTTCATAAGG
AGTATTTTAACTCCTCAATGCTAGGTACTTGGAGTATCTTGGCTAGCGTAGTAGACACCAAAGAGCTTAAAGTTTCCTTGTCATCTAAGCTGATAGTGAGAGAATATCCC
GACGTTTTTCCTAATGAGCTTCCAGGACTTCCACCTCTCAGAGAGATCGATTTTGCTATTGAGCTAGAGCCAAACATTGTTCCTATATCTAGAGCTCCTTATAGAATGGC
CCTAGCTAAGTTGAAAGAGCTAAATGTCAAGTTGCAGAACTTTGGGCACTATGAGCTCATTGTAATGTCCTTTGGTTTGACCAATGCTCCTGCAACTGAGGCTGAACATG
AAGAGCATTTGCATCAGAAGGTGTCTTTTATTGGCCATGTAGTATCTAGTAAGGGAGTCTCTGTAAAGCCAGCGAAGATTGAAGTTGTTACCAGCCTCAACCTTCTACAG
AAGGTGTCACATTCAGCAGCACATATTACTGAGCAAGCCCATTTGCGTAGAGACTTTGATAGAGATGAGATTGCAGTTTCAGTAGGGGAACTTACCTCACAGTTGGCTCA
GTTATCAGTGCAGCCAACTTTGAGACAGAAGATTATTGTTGATCAGCTAAATGATCCATATTTGGTTGAGAAGCGCCACCTTGCAAAAGCAGAGCAGGATGAGAAGTTCT
CCGTACCCCCTAATGATGGACTTATGCTTAAGAGGTGTTTATGCATCCCGGCAAACAGTGCAGTTAAGGCTAAGCTTTTGACTGAGGCCCATAGTTCTCCATTTTTTATG
CATCCTAGCAGTACAAAGAAAGTAGCAGACTTCGTTAGTAAGTGCTTGGTGTGCCATCAGGTAGCACCTATGAATGGTGTTTTGAGGTTTGAGAAGAAGAGAAAGCTAAG
TCCACGTTTTATAGGGCCATTTGAGATAATTGAACAGATTGACCCTGTAGCTTATCATTTGGCATTGACTCCATCGTTTTCTACAGTCCATGATGTATTTCTCTATGTTG
AGCAACGAAACCATGAAGCTGAAGAGGCCACATATGAGAGAGAGGATGGCATGAGAGCCCAGTACCTCGAGCTGTTCGAGAATTAG
Protein sequenceShow/hide protein sequence
MCLEVEPLGSILSVSTPSSKVMLSKEKIKACQVEVANHVLDVTLLVLDMRYFDVILDMDWLSVSTIKYKLFHKEYFNSSMLGTWSILASVVDTKELKVSLSSKLIVREYP
DVFPNELPGLPPLREIDFAIELEPNIVPISRAPYRMALAKLKELNVKLQNFGHYELIVMSFGLTNAPATEAEHEEHLHQKVSFIGHVVSSKGVSVKPAKIEVVTSLNLLQ
KVSHSAAHITEQAHLRRDFDRDEIAVSVGELTSQLAQLSVQPTLRQKIIVDQLNDPYLVEKRHLAKAEQDEKFSVPPNDGLMLKRCLCIPANSAVKAKLLTEAHSSPFFM
HPSSTKKVADFVSKCLVCHQVAPMNGVLRFEKKRKLSPRFIGPFEIIEQIDPVAYHLALTPSFSTVHDVFLYVEQRNHEAEEATYEREDGMRAQYLELFEN