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Pay0014833 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0014833
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase
Genome locationchr03:6601388..6601768
RNA-Seq ExpressionPay0014833
SyntenyPay0014833
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:1901800 - positive regulation of proteasomal protein catabolic process (biological process)
GO:0000502 - proteasome complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008194 - UDP-glycosyltransferase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0036402 - proteasome-activating ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025917.1 pol protein [Cucumis melo var. makuwa]2.5e-5494.92Show/hide
Query:  MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVADTTHIVDFEPLQVSENLSYEEKPVEILAREIKKLR
        MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVAD THIVDFEPLQVSENLSYEE+PVEILAREIKKLR
Subjt:  MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVADTTHIVDFEPLQVSENLSYEEKPVEILAREIKKLR

Query:  SRDIPLVKVLWQNHELKK
        SRDIPLVKVLWQNH +++
Subjt:  SRDIPLVKVLWQNHELKK

KAA0031437.1 pol protein [Cucumis melo var. makuwa]1.9e-5186.44Show/hide
Query:  MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVADTTHIVDFEPLQVSENLSYEEKPVEILAREIKKLR
        MVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+SMLR+YVAD TH+VDFEPLQVSENLSYEE+PVE+LARE+KKLR
Subjt:  MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVADTTHIVDFEPLQVSENLSYEEKPVEILAREIKKLR

Query:  SRDIPLVKVLWQNHELKK
        SR+IPLVK+LWQNH +++
Subjt:  SRDIPLVKVLWQNHELKK

KAA0036552.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.9e-5186.44Show/hide
Query:  MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVADTTHIVDFEPLQVSENLSYEEKPVEILAREIKKLR
        MVFLKV PMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPS SAVHDVFHVSMLRRY+AD TH+VDFEPLQ+SENLSYEE+P+EILARE+KKLR
Subjt:  MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVADTTHIVDFEPLQVSENLSYEEKPVEILAREIKKLR

Query:  SRDIPLVKVLWQNHELKK
        SR+I LVKVLW+NH++++
Subjt:  SRDIPLVKVLWQNHELKK

KAA0063793.1 pol protein [Cucumis melo var. makuwa]6.7e-5285.59Show/hide
Query:  MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVADTTHIVDFEPLQVSENLSYEEKPVEILAREIKKLR
        MVFLKVAPMKGV+RF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+SMLR+YVAD TH+VDFEPLQ+SENLSYEE+PVE+LARE+KKLR
Subjt:  MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVADTTHIVDFEPLQVSENLSYEEKPVEILAREIKKLR

Query:  SRDIPLVKVLWQNHELKK
        SR+IPLVK+LWQNHE+++
Subjt:  SRDIPLVKVLWQNHELKK

XP_016900342.1 PREDICTED: uncharacterized protein LOC107990872 [Cucumis melo]5.8e-5688.89Show/hide
Query:  MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVADTTHIVDFEPLQVSENLSYEEKPVEILAREIKKLR
        MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPS SAVHDVFHV+MLRRYVAD TH+VDFEP Q+SENLSY+E+PVEILARE+KKLR
Subjt:  MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVADTTHIVDFEPLQVSENLSYEEKPVEILAREIKKLR

Query:  SRDIPLVKVLWQNHELKKPRGREKRT
        SR+I LVKVLW+NHELK+P GREKRT
Subjt:  SRDIPLVKVLWQNHELKKPRGREKRT

TrEMBL top hitse value%identityAlignment
A0A1S4DWH9 uncharacterized protein LOC1079908722.8e-5688.89Show/hide
Query:  MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVADTTHIVDFEPLQVSENLSYEEKPVEILAREIKKLR
        MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPS SAVHDVFHV+MLRRYVAD TH+VDFEP Q+SENLSY+E+PVEILARE+KKLR
Subjt:  MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVADTTHIVDFEPLQVSENLSYEEKPVEILAREIKKLR

Query:  SRDIPLVKVLWQNHELKKPRGREKRT
        SR+I LVKVLW+NHELK+P GREKRT
Subjt:  SRDIPLVKVLWQNHELKKPRGREKRT

A0A5A7TP01 Reverse transcriptase1.2e-5494.92Show/hide
Query:  MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVADTTHIVDFEPLQVSENLSYEEKPVEILAREIKKLR
        MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVAD THIVDFEPLQVSENLSYEE+PVEILAREIKKLR
Subjt:  MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVADTTHIVDFEPLQVSENLSYEEKPVEILAREIKKLR

Query:  SRDIPLVKVLWQNHELKK
        SRDIPLVKVLWQNH +++
Subjt:  SRDIPLVKVLWQNHELKK

A0A5A7UBS1 Reverse transcriptase9.4e-5286.44Show/hide
Query:  MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVADTTHIVDFEPLQVSENLSYEEKPVEILAREIKKLR
        MVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+SMLR+YVAD TH+VDFEPLQVSENLSYEE+PVE+LARE+KKLR
Subjt:  MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVADTTHIVDFEPLQVSENLSYEEKPVEILAREIKKLR

Query:  SRDIPLVKVLWQNHELKK
        SR+IPLVK+LWQNH +++
Subjt:  SRDIPLVKVLWQNHELKK

A0A5A7V6R2 Reverse transcriptase3.2e-5285.59Show/hide
Query:  MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVADTTHIVDFEPLQVSENLSYEEKPVEILAREIKKLR
        MVFLKVAPMKGV+RF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+SMLR+YVAD TH+VDFEPLQ+SENLSYEE+PVE+LARE+KKLR
Subjt:  MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVADTTHIVDFEPLQVSENLSYEEKPVEILAREIKKLR

Query:  SRDIPLVKVLWQNHELKK
        SR+IPLVK+LWQNHE+++
Subjt:  SRDIPLVKVLWQNHELKK

A0A5D3CQB5 Reverse transcriptase9.4e-5286.44Show/hide
Query:  MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVADTTHIVDFEPLQVSENLSYEEKPVEILAREIKKLR
        MVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+SMLR+YVAD TH+VDFEPLQVSENLSYEE+PVE+LARE+KKLR
Subjt:  MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVADTTHIVDFEPLQVSENLSYEEKPVEILAREIKKLR

Query:  SRDIPLVKVLWQNHELKK
        SR+IPLVK+LWQNH +++
Subjt:  SRDIPLVKVLWQNHELKK

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein5.4e-0445.83Show/hide
Query:  KKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRRY
        K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L +Y
Subjt:  KKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRRY

P0CT35 Transposon Tf2-2 polyprotein5.4e-0445.83Show/hide
Query:  KKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRRY
        K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L +Y
Subjt:  KKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRRY

P0CT36 Transposon Tf2-3 polyprotein5.4e-0445.83Show/hide
Query:  KKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRRY
        K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L +Y
Subjt:  KKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRRY

P0CT41 Transposon Tf2-12 polyprotein5.4e-0445.83Show/hide
Query:  KKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRRY
        K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L +Y
Subjt:  KKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRRY

Q9UR07 Transposon Tf2-11 polyprotein5.4e-0445.83Show/hide
Query:  KKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRRY
        K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L +Y
Subjt:  KKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRRY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTTTTTGAAGGTAGCACCGATGAAGGGTGTTCTGAGGTTCGAGAAGAAAGGGAAGTTGAGTCCACGTTTCGTGGGGCCATTTGAGATACTGGAACGGATTGGCCC
TGTGGCTTATCGTTTGGCGTTGCCTCCATCACTCTCGGCAGTTCATGATGTATTCCATGTCTCCATGTTGAGGAGATACGTCGCAGACACGACGCACATCGTGGACTTCG
AGCCCTTACAGGTCAGTGAGAACTTGAGCTACGAGGAGAAGCCTGTCGAGATCTTAGCAAGAGAGATCAAGAAGCTTCGTAGTAGAGATATTCCACTAGTCAAAGTCCTT
TGGCAGAACCATGAGTTGAAGAAGCCACGTGGGAGAGAGAAGAGGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCTTTTTGAAGGTAGCACCGATGAAGGGTGTTCTGAGGTTCGAGAAGAAAGGGAAGTTGAGTCCACGTTTCGTGGGGCCATTTGAGATACTGGAACGGATTGGCCC
TGTGGCTTATCGTTTGGCGTTGCCTCCATCACTCTCGGCAGTTCATGATGTATTCCATGTCTCCATGTTGAGGAGATACGTCGCAGACACGACGCACATCGTGGACTTCG
AGCCCTTACAGGTCAGTGAGAACTTGAGCTACGAGGAGAAGCCTGTCGAGATCTTAGCAAGAGAGATCAAGAAGCTTCGTAGTAGAGATATTCCACTAGTCAAAGTCCTT
TGGCAGAACCATGAGTTGAAGAAGCCACGTGGGAGAGAGAAGAGGACATGA
Protein sequenceShow/hide protein sequence
MVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRYVADTTHIVDFEPLQVSENLSYEEKPVEILAREIKKLRSRDIPLVKVL
WQNHELKKPRGREKRT