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Pay0014872 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0014872
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionMethyl-CpG-binding domain-containing protein 13 isoform X1
Genome locationchr10:12919569..12921019
RNA-Seq ExpressionPay0014872
SyntenyPay0014872
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR038945 - Methyl-CpG-binding domain-containing protein 13-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033633.1 methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucumis melo var. makuwa]1.4e-4491.51Show/hide
Query:  SYIDQGNGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDNTIDLQHDEISSPVVCKKEVLTIDKARRQIIWSEKSSEPSEIVDDEAMFPSASSVGEIVPFE
        SYID  NGHALRSIRDVHRYLTSGKVSRLAHKSRNQRD+TIDLQHDEISSPVV KKEVLTI KARRQIIWSE SSEPSEIVDDEAMFPSA+SVGEIVPF+
Subjt:  SYIDQGNGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDNTIDLQHDEISSPVVCKKEVLTIDKARRQIIWSEKSSEPSEIVDDEAMFPSASSVGEIVPFE

Query:  KPDSSL
        KPD+SL
Subjt:  KPDSSL

KAA0041223.1 methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucumis melo var. makuwa]1.7e-4586.55Show/hide
Query:  SYIDQGNGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDNTIDLQHDEIS-----SPVVCKKEVLTIDKARRQIIWSEKSSEPSEIVDDEAMFPSASSVGE
        SYI+  NGHALRSIRDVH+YLTSGKVSRLAHKSRNQRD+TIDLQHDEIS     S VV KKEVLTI KARRQIIWSE SSEPSEIVDDEAMFPSA+SVGE
Subjt:  SYIDQGNGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDNTIDLQHDEIS-----SPVVCKKEVLTIDKARRQIIWSEKSSEPSEIVDDEAMFPSASSVGE

Query:  IVPFEKPDSSLGIVLNMQL
        IVPF+KPDSSLGIVLNMQL
Subjt:  IVPFEKPDSSLGIVLNMQL

TYK16026.1 methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucumis melo var. makuwa]1.7e-4586.55Show/hide
Query:  SYIDQGNGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDNTIDLQHDEIS-----SPVVCKKEVLTIDKARRQIIWSEKSSEPSEIVDDEAMFPSASSVGE
        SYI+  NGHALRSIRDVH+YLTSGKVSRLAHKSRNQRD+TIDLQHDEIS     S VV KKEVLTI KARRQIIWSE SSEPSEIVDDEAMFPSA+SVGE
Subjt:  SYIDQGNGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDNTIDLQHDEIS-----SPVVCKKEVLTIDKARRQIIWSEKSSEPSEIVDDEAMFPSASSVGE

Query:  IVPFEKPDSSLGIVLNMQL
        IVPF+KPDSSLGIVLNMQL
Subjt:  IVPFEKPDSSLGIVLNMQL

TYK22932.1 methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucumis melo var. makuwa]1.4e-4491.51Show/hide
Query:  SYIDQGNGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDNTIDLQHDEISSPVVCKKEVLTIDKARRQIIWSEKSSEPSEIVDDEAMFPSASSVGEIVPFE
        SYID  NGHALRSIRDVHRYLTSGKVSRLAHKSRNQRD+TIDLQHDEISSPVV KKEVLTI KARRQIIWSE SSEPSEIVDDEAMFPSA+SVGEIVPF+
Subjt:  SYIDQGNGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDNTIDLQHDEISSPVVCKKEVLTIDKARRQIIWSEKSSEPSEIVDDEAMFPSASSVGEIVPFE

Query:  KPDSSL
        KPD+SL
Subjt:  KPDSSL

XP_004140849.1 methyl-CpG-binding domain-containing protein 13 isoform X4 [Cucumis sativus]1.1e-3680.56Show/hide
Query:  ESYIDQGNGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDNTIDLQHDEISSPVVCKKEVLTIDKARRQIIWSEKSSEPSEIVDDEAMFPSASSVGEIVPF
        +SYID  NG+ALRSIRDVHRYLTSGKVSRL HKSRNQRDN I+ QHDEISSPVV KKEVLTI KARRQIIWSE +SEPSE+VD EAMFP+A SVGE V F
Subjt:  ESYIDQGNGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDNTIDLQHDEISSPVVCKKEVLTIDKARRQIIWSEKSSEPSEIVDDEAMFPSASSVGEIVPF

Query:  EKPDSSLG
          PD SLG
Subjt:  EKPDSSLG

TrEMBL top hitse value%identityAlignment
A0A0A0L6H4 MBD domain-containing protein6.9e-3781.31Show/hide
Query:  SYIDQGNGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDNTIDLQHDEISSPVVCKKEVLTIDKARRQIIWSEKSSEPSEIVDDEAMFPSASSVGEIVPFE
        SYID  NG+ALRSIRDVHRYLTSGKVSRL HKSRNQRDN I+ QHDEISSPVV KKEVLTI KARRQIIWSE +SEPSE+VD EAMFP+A SVGE V F 
Subjt:  SYIDQGNGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDNTIDLQHDEISSPVVCKKEVLTIDKARRQIIWSEKSSEPSEIVDDEAMFPSASSVGEIVPFE

Query:  KPDSSLG
         PD SLG
Subjt:  KPDSSLG

A0A5A7ST33 Methyl-CpG-binding domain-containing protein 13 isoform X16.9e-4591.51Show/hide
Query:  SYIDQGNGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDNTIDLQHDEISSPVVCKKEVLTIDKARRQIIWSEKSSEPSEIVDDEAMFPSASSVGEIVPFE
        SYID  NGHALRSIRDVHRYLTSGKVSRLAHKSRNQRD+TIDLQHDEISSPVV KKEVLTI KARRQIIWSE SSEPSEIVDDEAMFPSA+SVGEIVPF+
Subjt:  SYIDQGNGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDNTIDLQHDEISSPVVCKKEVLTIDKARRQIIWSEKSSEPSEIVDDEAMFPSASSVGEIVPFE

Query:  KPDSSL
        KPD+SL
Subjt:  KPDSSL

A0A5A7TDJ8 Methyl-CpG-binding domain-containing protein 13 isoform X18.1e-4686.55Show/hide
Query:  SYIDQGNGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDNTIDLQHDEIS-----SPVVCKKEVLTIDKARRQIIWSEKSSEPSEIVDDEAMFPSASSVGE
        SYI+  NGHALRSIRDVH+YLTSGKVSRLAHKSRNQRD+TIDLQHDEIS     S VV KKEVLTI KARRQIIWSE SSEPSEIVDDEAMFPSA+SVGE
Subjt:  SYIDQGNGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDNTIDLQHDEIS-----SPVVCKKEVLTIDKARRQIIWSEKSSEPSEIVDDEAMFPSASSVGE

Query:  IVPFEKPDSSLGIVLNMQL
        IVPF+KPDSSLGIVLNMQL
Subjt:  IVPFEKPDSSLGIVLNMQL

A0A5D3D046 Methyl-CpG-binding domain-containing protein 13 isoform X18.1e-4686.55Show/hide
Query:  SYIDQGNGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDNTIDLQHDEIS-----SPVVCKKEVLTIDKARRQIIWSEKSSEPSEIVDDEAMFPSASSVGE
        SYI+  NGHALRSIRDVH+YLTSGKVSRLAHKSRNQRD+TIDLQHDEIS     S VV KKEVLTI KARRQIIWSE SSEPSEIVDDEAMFPSA+SVGE
Subjt:  SYIDQGNGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDNTIDLQHDEIS-----SPVVCKKEVLTIDKARRQIIWSEKSSEPSEIVDDEAMFPSASSVGE

Query:  IVPFEKPDSSLGIVLNMQL
        IVPF+KPDSSLGIVLNMQL
Subjt:  IVPFEKPDSSLGIVLNMQL

A0A5D3DH45 Methyl-CpG-binding domain-containing protein 13 isoform X16.9e-4591.51Show/hide
Query:  SYIDQGNGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDNTIDLQHDEISSPVVCKKEVLTIDKARRQIIWSEKSSEPSEIVDDEAMFPSASSVGEIVPFE
        SYID  NGHALRSIRDVHRYLTSGKVSRLAHKSRNQRD+TIDLQHDEISSPVV KKEVLTI KARRQIIWSE SSEPSEIVDDEAMFPSA+SVGEIVPF+
Subjt:  SYIDQGNGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDNTIDLQHDEISSPVVCKKEVLTIDKARRQIIWSEKSSEPSEIVDDEAMFPSASSVGEIVPFE

Query:  KPDSSL
        KPD+SL
Subjt:  KPDSSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGAAGAAATTGACGGGGCTGAAGAAATTGATAAAGGTAATATTCTTTTTGAATCTTACATTGATCAGGGAAATGGACATGCACTTCGTTCAATAAGGGATGTACA
TCGGTATCTAACAAGTGGCAAGGTGAGCCGATTAGCACATAAATCAAGGAACCAAAGAGACAACACCATTGACCTTCAACATGATGAAATCTCTTCACCTGTTGTCTGTA
AGAAAGAGGTGCTAACTATTGACAAAGCAAGGAGACAGATTATATGGAGTGAGAAGTCATCAGAACCCAGTGAAATAGTGGATGATGAAGCTATGTTTCCAAGTGCTTCA
AGTGTTGGAGAAATTGTGCCGTTTGAAAAACCTGATTCAAGCCTTGGTATTGTTCTGAACATGCAGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTGAAGAAATTGACGGGGCTGAAGAAATTGATAAAGGTAATATTCTTTTTGAATCTTACATTGATCAGGGAAATGGACATGCACTTCGTTCAATAAGGGATGTACA
TCGGTATCTAACAAGTGGCAAGGTGAGCCGATTAGCACATAAATCAAGGAACCAAAGAGACAACACCATTGACCTTCAACATGATGAAATCTCTTCACCTGTTGTCTGTA
AGAAAGAGGTGCTAACTATTGACAAAGCAAGGAGACAGATTATATGGAGTGAGAAGTCATCAGAACCCAGTGAAATAGTGGATGATGAAGCTATGTTTCCAAGTGCTTCA
AGTGTTGGAGAAATTGTGCCGTTTGAAAAACCTGATTCAAGCCTTGGTATTGTTCTGAACATGCAGCTTTAG
Protein sequenceShow/hide protein sequence
MTEEIDGAEEIDKGNILFESYIDQGNGHALRSIRDVHRYLTSGKVSRLAHKSRNQRDNTIDLQHDEISSPVVCKKEVLTIDKARRQIIWSEKSSEPSEIVDDEAMFPSAS
SVGEIVPFEKPDSSLGIVLNMQL