; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0014943 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0014943
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionGag/pol protein
Genome locationchr09:10792909..10796919
RNA-Seq ExpressionPay0014943
SyntenyPay0014943
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031826.1 gag/pol protein [Cucumis melo var. makuwa]0.0e+0072.46Show/hide
Query:  MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY
        MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY
Subjt:  MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY

Query:  QIKHDALKYIYNARMNEGAS--------------------------------------------------------------------------------
        QIKHDALKYIYNARMNEGAS                                                                                
Subjt:  QIKHDALKYIYNARMNEGAS--------------------------------------------------------------------------------

Query:  ------FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET---------
              FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET         
Subjt:  ------FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET---------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK
                                                      W     HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK
Subjt:  ----------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK

Query:  EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT
        EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT
Subjt:  EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT

Query:  PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK
        PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK
Subjt:  PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK

Query:  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI--------------------------------------------------------------
        GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI                                                              
Subjt:  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI--------------------------------------------------------------

Query:  -----------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV
                   DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV
Subjt:  -----------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV

Query:  AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN
        AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN
Subjt:  AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN

Query:  KSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT
        KSVAFLVLYVDDILLIGNDI          ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT
Subjt:  KSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT

Query:  PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFT
        PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA                                       DLILTGYTDSDFQTDRDSRKSTSGSVFT
Subjt:  PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFT

Query:  LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ
        LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ
Subjt:  LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ

Query:  IASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
        IASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
Subjt:  IASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT

KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa]0.0e+0072.38Show/hide
Query:  MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY
        MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY
Subjt:  MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY

Query:  QIKHDALKYIYNARMNEGAS--------------------------------------------------------------------------------
        QIKHDALKYIYNARMNEGAS                                                                                
Subjt:  QIKHDALKYIYNARMNEGAS--------------------------------------------------------------------------------

Query:  ------FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET---------
              FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET         
Subjt:  ------FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET---------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK
                                                      W     HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK
Subjt:  ----------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK

Query:  EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT
        EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT
Subjt:  EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT

Query:  PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK
        PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK
Subjt:  PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK

Query:  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI--------------------------------------------------------------
        GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI                                                              
Subjt:  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI--------------------------------------------------------------

Query:  -----------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV
                   DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV
Subjt:  -----------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV

Query:  AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN
        AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN
Subjt:  AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN

Query:  KSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT
        KSVAFLVLYVDDILLIGNDI          ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT
Subjt:  KSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT

Query:  PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFT
        PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA                                       DLILTGYTDSDFQTDRDSRKSTSGSVFT
Subjt:  PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFT

Query:  LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ
        LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ
Subjt:  LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ

Query:  IASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
        IASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
Subjt:  IASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]0.0e+0072.38Show/hide
Query:  MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY
        MLAADKLNGNNYASWKNT NTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY
Subjt:  MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY

Query:  QIKHDALKYIYNARMNEGAS--------------------------------------------------------------------------------
        QIKHDALKYIYNARMNEGAS                                                                                
Subjt:  QIKHDALKYIYNARMNEGAS--------------------------------------------------------------------------------

Query:  ------FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET---------
              FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET         
Subjt:  ------FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET---------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK
                                                      W     HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK
Subjt:  ----------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK

Query:  EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT
        EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT
Subjt:  EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT

Query:  PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK
        PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK
Subjt:  PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK

Query:  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI--------------------------------------------------------------
        GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI                                                              
Subjt:  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI--------------------------------------------------------------

Query:  -----------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV
                   DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV
Subjt:  -----------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV

Query:  AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN
        AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN
Subjt:  AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN

Query:  KSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT
        KSVAFLVLYVDDILLIGNDI          ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT
Subjt:  KSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT

Query:  PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFT
        PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA                                       DLILTGYTDSDFQTDRDSRKSTSGSVFT
Subjt:  PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFT

Query:  LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ
        LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ
Subjt:  LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ

Query:  IASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
        IASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
Subjt:  IASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]0.0e+0072.08Show/hide
Query:  MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY
        MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY
Subjt:  MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY

Query:  QIKHDALKYIYNARMNEGAS--------------------------------------------------------------------------------
        QIKHDALKYIYNARMNEGAS                                                                                
Subjt:  QIKHDALKYIYNARMNEGAS--------------------------------------------------------------------------------

Query:  ------FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET---------
              FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET         
Subjt:  ------FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET---------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK
                                                      W     HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK
Subjt:  ----------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK

Query:  EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT
        EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT
Subjt:  EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT

Query:  PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK
        PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK
Subjt:  PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK

Query:  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI--------------------------------------------------------------
        GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI                                                              
Subjt:  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI--------------------------------------------------------------

Query:  -----------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV
                   DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV
Subjt:  -----------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV

Query:  AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN
        AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN
Subjt:  AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN

Query:  KSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT
        KSVAFLVLYVDDILLIGNDI          ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT
Subjt:  KSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT

Query:  PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFT
        PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA                                       DLILTGYTDSDFQTDRDSRKSTSGSVFT
Subjt:  PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFT

Query:  LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ
        LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ
Subjt:  LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ

Query:  IASTHNVADPFTKPLTAK
        IASTHNVADPFTKPLTAK
Subjt:  IASTHNVADPFTKPLTAK

TYJ97618.1 gag/pol protein [Cucumis melo var. makuwa]0.0e+0083.38Show/hide
Query:  MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY
        MLAADKLNGNNYASWKNTIN VLIIDDL+FVLVEECPQVPAANAT+TVREPYERWAK NEK RAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY
Subjt:  MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY

Query:  QIKHDALKYIYNARMNEGAS-----------------------------------------FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKT
        QI HDALKYIYNARMNEGAS                                         FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKT
Subjt:  QIKHDALKYIYNARMNEGAS-----------------------------------------FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKT

Query:  TKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLEL
        TKK+KA KGICFH NQEGHWKRNCPKYLAEKKKAKQG          HINLNRIERLVKNG+LSELEENSLP+CESCLEGKMTKRPFTGKGHRAKEPLEL
Subjt:  TKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLEL

Query:  VHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNG
        VHSDLCGPMNVKARG FEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMEC I+SQLSAPGTPQQNG
Subjt:  VHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNG

Query:  VSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGG
        VSERRNRTLLDMVRSM+SYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGG
Subjt:  VSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGG

Query:  YFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI-------------------------------------------------------------------
        YFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI                                                                   
Subjt:  YFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI-------------------------------------------------------------------

Query:  ------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKS
              DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKS
Subjt:  ------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKS

Query:  IRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAF
        IRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAF
Subjt:  IRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAF

Query:  LVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVE
        LVLYVDDILLIGNDI          ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVE
Subjt:  LVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVE

Query:  EMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGA
        EMRHIPYASAVGSLMYAMLCTRPDICYA                                       DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGA
Subjt:  EMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGA

Query:  VVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTH
        VVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTH
Subjt:  VVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTH

Query:  NVADPFTKPLTAKVFEGHLESLGLRDMPHLT
        NVADPFTKPLTAKVFEGHLESLGLRDMPHLT
Subjt:  NVADPFTKPLTAKVFEGHLESLGLRDMPHLT

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein0.0e+0072.46Show/hide
Query:  MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY
        MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY
Subjt:  MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY

Query:  QIKHDALKYIYNARMNEGAS--------------------------------------------------------------------------------
        QIKHDALKYIYNARMNEGAS                                                                                
Subjt:  QIKHDALKYIYNARMNEGAS--------------------------------------------------------------------------------

Query:  ------FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET---------
              FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET         
Subjt:  ------FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET---------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK
                                                      W     HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK
Subjt:  ----------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK

Query:  EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT
        EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT
Subjt:  EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT

Query:  PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK
        PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK
Subjt:  PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK

Query:  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI--------------------------------------------------------------
        GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI                                                              
Subjt:  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI--------------------------------------------------------------

Query:  -----------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV
                   DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV
Subjt:  -----------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV

Query:  AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN
        AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN
Subjt:  AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN

Query:  KSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT
        KSVAFLVLYVDDILLIGNDI          ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT
Subjt:  KSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT

Query:  PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFT
        PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA                                       DLILTGYTDSDFQTDRDSRKSTSGSVFT
Subjt:  PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFT

Query:  LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ
        LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ
Subjt:  LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ

Query:  IASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
        IASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
Subjt:  IASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT

A0A5A7TZD7 Gag/pol protein0.0e+0072.38Show/hide
Query:  MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY
        MLAADKLNGNNYASWKNT NTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY
Subjt:  MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY

Query:  QIKHDALKYIYNARMNEGAS--------------------------------------------------------------------------------
        QIKHDALKYIYNARMNEGAS                                                                                
Subjt:  QIKHDALKYIYNARMNEGAS--------------------------------------------------------------------------------

Query:  ------FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET---------
              FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET         
Subjt:  ------FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET---------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK
                                                      W     HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK
Subjt:  ----------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK

Query:  EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT
        EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT
Subjt:  EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT

Query:  PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK
        PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK
Subjt:  PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK

Query:  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI--------------------------------------------------------------
        GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI                                                              
Subjt:  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI--------------------------------------------------------------

Query:  -----------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV
                   DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV
Subjt:  -----------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV

Query:  AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN
        AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN
Subjt:  AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN

Query:  KSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT
        KSVAFLVLYVDDILLIGNDI          ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT
Subjt:  KSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT

Query:  PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFT
        PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA                                       DLILTGYTDSDFQTDRDSRKSTSGSVFT
Subjt:  PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFT

Query:  LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ
        LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ
Subjt:  LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ

Query:  IASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
        IASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
Subjt:  IASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT

A0A5A7UGV2 Gag/pol protein0.0e+0072.08Show/hide
Query:  MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY
        MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY
Subjt:  MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY

Query:  QIKHDALKYIYNARMNEGAS--------------------------------------------------------------------------------
        QIKHDALKYIYNARMNEGAS                                                                                
Subjt:  QIKHDALKYIYNARMNEGAS--------------------------------------------------------------------------------

Query:  ------FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET---------
              FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET         
Subjt:  ------FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET---------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK
                                                      W     HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK
Subjt:  ----------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK

Query:  EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT
        EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT
Subjt:  EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT

Query:  PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK
        PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK
Subjt:  PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK

Query:  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI--------------------------------------------------------------
        GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI                                                              
Subjt:  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI--------------------------------------------------------------

Query:  -----------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV
                   DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV
Subjt:  -----------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV

Query:  AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN
        AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN
Subjt:  AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN

Query:  KSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT
        KSVAFLVLYVDDILLIGNDI          ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT
Subjt:  KSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT

Query:  PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFT
        PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA                                       DLILTGYTDSDFQTDRDSRKSTSGSVFT
Subjt:  PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFT

Query:  LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ
        LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ
Subjt:  LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ

Query:  IASTHNVADPFTKPLTAK
        IASTHNVADPFTKPLTAK
Subjt:  IASTHNVADPFTKPLTAK

A0A5D3BHG7 Gag/pol protein0.0e+0083.38Show/hide
Query:  MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY
        MLAADKLNGNNYASWKNTIN VLIIDDL+FVLVEECPQVPAANAT+TVREPYERWAK NEK RAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY
Subjt:  MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY

Query:  QIKHDALKYIYNARMNEGAS-----------------------------------------FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKT
        QI HDALKYIYNARMNEGAS                                         FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKT
Subjt:  QIKHDALKYIYNARMNEGAS-----------------------------------------FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKT

Query:  TKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLEL
        TKK+KA KGICFH NQEGHWKRNCPKYLAEKKKAKQG          HINLNRIERLVKNG+LSELEENSLP+CESCLEGKMTKRPFTGKGHRAKEPLEL
Subjt:  TKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLEL

Query:  VHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNG
        VHSDLCGPMNVKARG FEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMEC I+SQLSAPGTPQQNG
Subjt:  VHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNG

Query:  VSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGG
        VSERRNRTLLDMVRSM+SYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGG
Subjt:  VSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGG

Query:  YFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI-------------------------------------------------------------------
        YFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI                                                                   
Subjt:  YFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI-------------------------------------------------------------------

Query:  ------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKS
              DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKS
Subjt:  ------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKS

Query:  IRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAF
        IRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAF
Subjt:  IRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAF

Query:  LVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVE
        LVLYVDDILLIGNDI          ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVE
Subjt:  LVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVE

Query:  EMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGA
        EMRHIPYASAVGSLMYAMLCTRPDICYA                                       DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGA
Subjt:  EMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGA

Query:  VVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTH
        VVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTH
Subjt:  VVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTH

Query:  NVADPFTKPLTAKVFEGHLESLGLRDMPHLT
        NVADPFTKPLTAKVFEGHLESLGLRDMPHLT
Subjt:  NVADPFTKPLTAKVFEGHLESLGLRDMPHLT

A0A5D3CPJ6 Gag/pol protein0.0e+0072.38Show/hide
Query:  MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY
        MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY
Subjt:  MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY

Query:  QIKHDALKYIYNARMNEGAS--------------------------------------------------------------------------------
        QIKHDALKYIYNARMNEGAS                                                                                
Subjt:  QIKHDALKYIYNARMNEGAS--------------------------------------------------------------------------------

Query:  ------FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET---------
              FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET         
Subjt:  ------FHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET---------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK
                                                      W     HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK
Subjt:  ----------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAK

Query:  EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT
        EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT
Subjt:  EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGT

Query:  PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK
        PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK
Subjt:  PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK

Query:  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI--------------------------------------------------------------
        GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI                                                              
Subjt:  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI--------------------------------------------------------------

Query:  -----------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV
                   DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV
Subjt:  -----------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPV

Query:  AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN
        AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN
Subjt:  AMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN

Query:  KSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT
        KSVAFLVLYVDDILLIGNDI          ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT
Subjt:  KSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKT

Query:  PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFT
        PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA                                       DLILTGYTDSDFQTDRDSRKSTSGSVFT
Subjt:  PQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFT

Query:  LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ
        LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ
Subjt:  LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ

Query:  IASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
        IASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
Subjt:  IASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT

SwissProt top hitse value%identityAlignment
P04146 Copia protein3.5e-11129.09Show/hide
Query:  INLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPF---TGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEK
        + + R        LL+ L E S  +CE CL GK  + PF     K H  K PL +VHSD+CGP+         YF+ F D ++ Y   YL+++KS+    
Subjt:  INLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPF---TGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEK

Query:  FKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKS
        F+++ A+ E   +  +     D G EY+  + + + ++ GI   L+ P TPQ NGVSER  RT+ +  R+M+S A L  SFWG AV TA Y++N +PS++
Subjt:  FKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKS

Query:  V---SETPLKLWNGRKGSLRHFRIWGCPAHV-LENNPKKLEPRSKLCLFVGY-PKG--------------------------TRGGYFYD----------
        +   S+TP ++W+ +K  L+H R++G   +V ++N   K + +S   +FVGY P G                          +R   F            
Subjt:  V---SETPLKLWNGRKGSLRHFRIWGCPAHV-LENNPKKLEPRSKLCLFVGY-PKG--------------------------TRGGYFYD----------

Query:  ----------------------------------------PKDNKVFVST---------------------NATFLEE-------DHIR-----------
                                                P D++  + T                     N  FL E       DH+            
Subjt:  ----------------------------------------PKDNKVFVST---------------------NATFLEE-------DHIR-----------

Query:  ------EHKPRSKID-----------------------------------------------PLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQ
              EH     ID                                               P +F +     DK  W +A+N EL +   N+ W +  +
Subjt:  ------EHKPRSKID-----------------------------------------------PLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQ

Query:  PDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPG
        P+    +  +W++  K    G    +KARLVA+G+TQ   +DYEETF+PVA + S R +LS+   ++ ++ QMDVKTAFLNG L+E IYM+ P+G  I  
Subjt:  PDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPG

Query:  QEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVY---KRIINKSVAFLVLYVDDILLIGND----------IATQFQMKDLGEAQFVLG
            +CKLN++IYGLKQA+R W   F+ A+K   F     + C+Y   K  IN+++ +++LYVDD+++   D          +  +F+M DL E +  +G
Subjt:  QEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVY---KRIINKSVAFLVLYVDDILLIGND----------IATQFQMKDLGEAQFVLG

Query:  IQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLP----FRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYADLILT-----
        I+I  + +   + LSQ++Y+ KI+ K++M+N      P      + +  S E C           + P  S +G LMY MLCTRPD+  A  IL+     
Subjt:  IQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLP----FRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYADLILT-----

Query:  -------------------------------------GYTDSDFQTDRDSRKSTSGSVFTL-NGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR
                                             GY DSD+      RKST+G +F + +   + W + +Q  +A S+ EAEY+A  EA +EA+WL+
Subjt:  -------------------------------------GYTDSDFQTDRDSRKSTSGSVFTL-NGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR

Query:  NFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGL
          L  + +   +  PI +Y DN G ++ +  P  HKR KHI+ KYH  RE V    + +  I + + +AD FTKPL A  F    + LGL
Subjt:  NFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.8e-16635.49Show/hide
Query:  NKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETWHINLNR-----IERLVKNGLLSELEENSLPV
        N+KW+  KG      +L  AK       A+G  +  N E      C   L           D + ++ WH  +       ++ L K  L+S  +  ++  
Subjt:  NKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETWHINLNR-----IERLVKNGLLSELEENSLPV

Query:  CESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYM
        C+ CL GK  +  F     R    L+LV+SD+CGPM +++ GG +YF+TF DD SR  +VY+++ K +  + F+++ A VE    + +K  RSD GGEY 
Subjt:  CESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYM

Query:  DLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCP--
          +F+ Y    GI  + + PGTPQ NGV+ER NRT+++ VRSM+  A LP SFWG AVQTA Y++N  PS  ++ E P ++W  ++ S  H +++GC   
Subjt:  DLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCP--

Query:  AHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE-------------------------------------DHIRE-------
        AHV +    KL+ +S  C+F+GY     G   +DP   KV  S +  F E                                      D + E       
Subjt:  AHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE-------------------------------------DHIRE-------

Query:  ------------------------HKP-----RSKI-----------------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIG
                                H+P     R ++                 +P + K+ +   +K++ +KAM  E+ES+  N  + LV+ P G +P+ 
Subjt:  ------------------------HKP-----RSKI-----------------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIG

Query:  CKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKL
        CKW++K K+  D K+  +KARLV KG+ Q +G+D++E FSPV  + SIR +LS+AA  D E+ Q+DVKTAFL+G+LEE IYM+QPEGF + G++  +CKL
Subjt:  CKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKL

Query:  NRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVY-KRIINKSVAFLVLYVDDILLIG----------NDIATQFQMKDLGEAQFVLGIQIFRDRKNK
        N+S+YGLKQA R W ++FD+ +KS  + +   +PCVY KR    +   L+LYVDD+L++G           D++  F MKDLG AQ +LG++I R+R ++
Subjt:  NRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVY-KRIINKSVAFLVLYVDDILLIG----------NDIATQFQMKDLGEAQFVLGIQIFRDRKNK

Query:  MLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA------------------------
         L LSQ  YI++++ +++M+N+K    P    + LSK+ CP T ++   M  +PY+SAVGSLMYAM+CTRPDI +A                        
Subjt:  MLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA------------------------

Query:  ---------------DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITL
                       D IL GYTD+D   D D+RKS++G +FT +GGA+ W+S  Q C+A ST EAEY+AA E  KE +WL+ FL +L +     K   +
Subjt:  ---------------DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITL

Query:  YCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGL
        YCD+  A+  S+    H R KHI+ +YH IRE+V    + V +I++  N AD  TK +    FE   E +G+
Subjt:  YCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGL

Q12491 Transposon Ty2-B Gag-Pol polyprotein6.6e-2526.43Show/hide
Query:  EKKKAKQGKYDLLVLETWHINLNRIERLVKNGLLSELEENSLP-------VCESCLEGKMTKRPFTGKGHRAK-----EPLELVHSDLCGPMNVKARGGF
        + K   +  Y L+     H N   I++ +K   ++ L+E+ +         C  CL GK TK     KG R K     EP + +H+D+ GP++   +   
Subjt:  EKKKAKQGKYDLLVLETWHINLNRIERLVKNGLLSELEENSLP-------VCESCLEGKMTKRPFTGKGHRAK-----EPLELVHSDLCGPMNVKARGGF

Query:  EYFITFTDDYSRYGYVYLMQHKSE--ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRS
         YFI+FTD+ +R+ +VY +  + E   L  F    A ++N  +  +   + DRG EY +     +    GI +  +     + +GV+ER NRTLL+  R+
Subjt:  EYFITFTDDYSRYGYVYLMQHKSE--ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRS

Query:  MMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG-SLRHFRIWGCPAHVLENNP-KKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVS
        ++  + LPN  W  AV+ +  I N + S   ++   +   G  G  +     +G P  V  +NP  K+ PR      +   + + G   Y P   K   +
Subjt:  MMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG-SLRHFRIWGCPAHVLENNP-KKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVS

Query:  TNATFLEEDHIREHKPRSKIDPLTFKKAMEDVD
        TN   L+++       +SK+D   +     D D
Subjt:  TNATFLEEDHIREHKPRSKIDPLTFKKAMEDVD

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE15.6e-9325.79Show/hide
Query:  TWHINLNR-----IERLVKNGLLSELE-ENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK
        +WH  L       +  ++ N  LS L   +    C  CL  K  K PF+     +  PLE ++SD+     + +   + Y++ F D ++RY ++Y ++ K
Subjt:  TWHINLNR-----IERLVKNGLLSELE-ENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK

Query:  SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILN
        S+  E F  +K  +EN     I TF SD GGE++ L    Y  + GI    S P TP+ NG+SER++R +++   +++S+A +P ++W YA   AVY++N
Subjt:  SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILN

Query:  CVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAH--VLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLE---------------E
         +P+  +  E+P +   G   +    R++GC  +  +   N  KL+ +S+ C+F+GY            + +++++S +  F E               +
Subjt:  CVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAH--VLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLE---------------E

Query:  DHIREH----------------------------------------------------------------------------------------------
        +  RE                                                                                               
Subjt:  DHIREH----------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------KPRSKI----------DPLTFKKA
                                                                                    KP  K           +P T  +A
Subjt:  ----------------------------------------------------------------------------KPRSKI----------DPLTFKKA

Query:  MEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDG-VKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDY
        ++D   + W  AM  E+ +   N  WDLV  P   V  +GC+WI+ +K  +DG +  +KARLVAKGY Q  G+DY ETFSPV    SIRI+L +A    +
Subjt:  MEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDG-VKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDY

Query:  EIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGN
         I Q+DV  AFL G L + +YM QP GFI   +   +CKL +++YGLKQA R+W +     + + GF   V +  ++     KS+ ++++YVDDIL+ GN
Subjt:  EIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGN

Query:  D----------IATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGS
        D          ++ +F +KD  E  + LGI+    R    L LSQ  YI  ++ + +M  +K    P      LS     K     E      Y   VGS
Subjt:  D----------IATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGS

Query:  LMYAMLCTRPDICYA----------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIA
        L Y +  TRPDI YA                                         L L  Y+D+D+  D+D   ST+G +  L    + W S KQ  + 
Subjt:  LMYAMLCTRPDICYA----------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIA

Query:  DSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTA
         S+ EAEY +    + E  W+ + L +L +   +++P  +YCDN GA      P  H R KHI   YH IR  V  G + V  +++   +AD  TKPL+ 
Subjt:  DSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTA

Query:  KVFEGHLESLGLRDMP
          F+     +G+  +P
Subjt:  KVFEGHLESLGLRDMP

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.9e-9325.81Show/hide
Query:  TWHINLNRIERLVKNGLLSELEENSLPV---------CESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLM
        +WH  L      + N ++S    +SLPV         C  C   K  K PF+     + +PLE ++SD+     + +   + Y++ F D ++RY ++Y +
Subjt:  TWHINLNRIERLVKNGLLSELEENSLPV---------CESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLM

Query:  QHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVY
        + KS+  + F  +K+ VEN     I T  SD GGE++ L+  +YL + GI    S P TP+ NG+SER++R +++M  +++S+A +P ++W YA   AVY
Subjt:  QHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVY

Query:  ILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAH--VLENNPKKLEPRSKLCLFVGY------------PKG-------------------------
        ++N +P+  +  ++P +   G+  +    +++GC  +  +   N  KLE +SK C F+GY            P G                         
Subjt:  ILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAH--VLENNPKKLEPRSKLCLFVGY------------PKG-------------------------

Query:  ---------------------------------------------------------------------------------------------TRGGYFY
                                                                                                     +      
Subjt:  ---------------------------------------------------------------------------------------------TRGGYFY

Query:  DPKDN-------------------KVFVSTNATFLEEDH-----------------------------IREH-----------KPRSKI----------D
        +P  N                      + T +T + E +                             +  H           KP  K           +
Subjt:  DPKDN-------------------KVFVSTNATFLEEDH-----------------------------IREH-----------KPRSKI----------D

Query:  PLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLV-DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLS
        P T  +AM+D   D W +AM  E+ +   N  WDLV   P  V  +GC+WI+ +K  +DG +  +KARLVAKGY Q  G+DY ETFSPV    SIRI+L 
Subjt:  PLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLV-DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLS

Query:  IAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVD
        +A    + I Q+DV  AFL G L + +YM QP GF+   +   +C+L ++IYGLKQA R+W +   T + + GF   + +  ++     +S+ ++++YVD
Subjt:  IAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVD

Query:  DILLIGND----------IATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIP
        DIL+ GND          ++ +F +K+  +  + LGI+    R  + L LSQ  Y   ++ + +M  +K    P      L+     K P   E      
Subjt:  DILLIGND----------IATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIP

Query:  YASAVGSLMYAMLCTRPDICYA----------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRS
        Y   VGSL Y +  TRPD+ YA                                         L L  Y+D+D+  D D   ST+G +  L    + W S
Subjt:  YASAVGSLMYAMLCTRPDICYA----------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRS

Query:  IKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADP
         KQ  +  S+ EAEY +    + E  W+ + L +L +   +S P  +YCDN GA      P  H R KHI   YH IR  V  G + V  +++   +AD 
Subjt:  IKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADP

Query:  FTKPLTAKVFEGHLESLGLRDMP
         TKPL+   F+     +G+  +P
Subjt:  FTKPLTAKVFEGHLESLGLRDMP

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.8e-6832.09Show/hide
Query:  DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLS
        +P T+ +A E +    W  AM+ E+ +M     W++   P   KPIGCKW+YK K  +DG ++ +KARLVAKGYTQ EG+D+ ETFSPV  L S++++L+
Subjt:  DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLS

Query:  IAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE----QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLV
        I+A +++ + Q+D+  AFLNG+L+E IYM+ P G+     +      +C L +SIYGLKQASR W ++F   +  +GF Q   +   + +I       ++
Subjt:  IAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE----QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLV

Query:  LYVDDILLIGND----------IATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEM
        +YVDDI++  N+          + + F+++DLG  ++ LG++I R      + + Q  Y   ++ +  +   K   +P    VT S      +  D  + 
Subjt:  LYVDDILLIGND----------IATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEM

Query:  RHIPYASAVGSLMYAMLCTRPDICY----------------------------------------ADLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV
        +   Y   +G LMY  + TR DI +                                        A++ L  ++D+ FQ+ +D+R+ST+G    L    +
Subjt:  RHIPYASAVGSLMYAMLCTRPDICY----------------------------------------ADLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIRE
         W+S KQ  ++ S+ EAEY A   A  E +WL  F  +L++   +SKP  L+CDN+ A+  +     H+R KHIE   H +RE
Subjt:  VWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIRE

ATMG00300.1 Gag-Pol-related retrotransposon family protein1.1e-0640.62Show/hide
Query:  HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNV
        H++   +E LVK G L   + +SL  CE C+ GK  +  F+   H  K PL+ VHSDL G  +V
Subjt:  HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNV

ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.8e-0735.37Show/hide
Query:  NRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSK
        NRT+++ VRSM+    LP +F   A  TAV+I+N  PS +++   P ++W     +  + R +GC A++   +  KL+PR+K
Subjt:  NRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSK

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)5.7e-1644.19Show/hide
Query:  WIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIA
        W +AM  EL+++  N  W LV  P     +GCKW++K K  +DG +   KARLVAKG+ Q EG+ + ET+SPV    +IR +L++A
Subjt:  WIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGCTGCTGATAAACTTAATGGCAATAATTATGCATCTTGGAAAAATACTATCAACACTGTGCTAATCATCGATGACCTTAGATTTGTCCTAGTTGAGGAGTGTCC
TCAAGTCCCAGCTGCTAATGCAACTCGAACTGTTCGAGAACCATATGAGCGTTGGGCCAAGGCAAATGAAAAAGCCCGAGCATACATCTTGGCAAGCTTATCTGAAGTAT
TGGCCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATTATGGACTCCTTGCAGGAGATGTTTGGTCAGGCCTCTTATCAGATCAAGCATGATGCTCTGAAATACATT
TATAATGCCCGTATGAATGAGGGAGCCTCATTCCATAGGGGTTCGACCTCTGGAACTAAGTCTATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGGGTGG
CCAAGGAAATAAAGCTAACCTCGCTGCTGCTAAAACGACCAAGAAAGCCAAAGCTGCAAAGGGAATATGTTTCCATTGCAACCAAGAGGGACATTGGAAGAGAAACTGTC
CCAAGTACTTGGCAGAAAAGAAGAAGGCTAAACAAGGTAAATATGATTTACTAGTGCTAGAGACTTGGCATATAAATCTCAATAGGATTGAGAGATTAGTAAAGAATGGA
CTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCT
AGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATT
TAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAG
TATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAAC
CTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAA
GTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTG
GAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATT
TTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGA
ATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCA
GATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTAT
TCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAAC
CAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCA
ATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCAT
TGGGAATGATATAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTC
AAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAGGAACAGTGTCCTAAG
ACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATTTGTTATGCGGATTTGAT
TCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCA
AGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTAGTT
CCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCA
CTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGG
GTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACATTTAACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGGCTGCTGATAAACTTAATGGCAATAATTATGCATCTTGGAAAAATACTATCAACACTGTGCTAATCATCGATGACCTTAGATTTGTCCTAGTTGAGGAGTGTCC
TCAAGTCCCAGCTGCTAATGCAACTCGAACTGTTCGAGAACCATATGAGCGTTGGGCCAAGGCAAATGAAAAAGCCCGAGCATACATCTTGGCAAGCTTATCTGAAGTAT
TGGCCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATTATGGACTCCTTGCAGGAGATGTTTGGTCAGGCCTCTTATCAGATCAAGCATGATGCTCTGAAATACATT
TATAATGCCCGTATGAATGAGGGAGCCTCATTCCATAGGGGTTCGACCTCTGGAACTAAGTCTATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGGGTGG
CCAAGGAAATAAAGCTAACCTCGCTGCTGCTAAAACGACCAAGAAAGCCAAAGCTGCAAAGGGAATATGTTTCCATTGCAACCAAGAGGGACATTGGAAGAGAAACTGTC
CCAAGTACTTGGCAGAAAAGAAGAAGGCTAAACAAGGTAAATATGATTTACTAGTGCTAGAGACTTGGCATATAAATCTCAATAGGATTGAGAGATTAGTAAAGAATGGA
CTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCT
AGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATT
TAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAG
TATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAAC
CTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAA
GTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTG
GAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATT
TTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGA
ATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCA
GATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTAT
TCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAAC
CAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCA
ATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCAT
TGGGAATGATATAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTC
AAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAGGAACAGTGTCCTAAG
ACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATTTGTTATGCGGATTTGAT
TCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCA
AGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTAGTT
CCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCA
CTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGG
GTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACATTTAACCTAG
Protein sequenceShow/hide protein sequence
MLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYI
YNARMNEGASFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETWHINLNRIERLVKNG
LLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGE
YMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKL
EPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGA
DGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTA
IKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPK
TPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYADLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVV
PNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT