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Pay0015169 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0015169
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPHD finger protein ALFIN-LIKE 3-like
Genome locationchr03:7256761..7257164
RNA-Seq ExpressionPay0015169
SyntenyPay0015169
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003712 - transcription coregulator activity (molecular function)
GO:0042393 - histone binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR011011 - Zinc finger, FYVE/PHD-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR045104 - Alfin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067842.1 PHD finger protein ALFIN-LIKE 3-like [Cucumis melo var. makuwa]2.0e-4089.69Show/hide
Query:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEVGIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFVV
        MP VFEVVTNIAK+QVKEKSST NGSKSKSSFKSSEAEMQGTCAR SQAR+EV  YEED+DEH D LCRACGENYASDEFWICCDIYEKWFHGKFVV
Subjt:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEVGIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFVV

XP_004141692.1 PHD finger protein ALFIN-LIKE 3 [Cucumis sativus]2.2e-3484.54Show/hide
Query:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEV-GIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFV
        +P VFEVVT IAKKQVKEKSST NGSKSKSSFKS EAEMQG  AR SQAREEV  +YEEDEDEH DTLC ACGENYASDEFWICCDI EKWFHGK V
Subjt:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEV-GIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFV

XP_008462330.1 PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis melo]1.7e-3179Show/hide
Query:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSS---EAEMQGTCARHSQAREEV-GIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFV
        +P VFEVVT IAKKQVKEKSS+ NGSKSKSSFKS+   EA+ QG  AR SQAREEV  +YEEDEDEH DTLC ACGENYASDEFWICCDI EKWFHGK V
Subjt:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSS---EAEMQGTCARHSQAREEV-GIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFV

XP_008462331.1 PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X2 [Cucumis melo]7.0e-3381.44Show/hide
Query:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEV-GIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFV
        +P VFEVVT IAKKQVKEKSS+ NGSKSKSSFKS EA+ QG  AR SQAREEV  +YEEDEDEH DTLC ACGENYASDEFWICCDI EKWFHGK V
Subjt:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEV-GIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFV

XP_016903323.1 PREDICTED: PHD finger protein ALFIN-LIKE 3-like [Cucumis melo]2.0e-4089.69Show/hide
Query:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEVGIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFVV
        MP VFEVVTNIAK+QVKEKSST NGSKSKSSFKSSEAEMQGTCAR SQAR+EV  YEED+DEH D LCRACGENYASDEFWICCDIYEKWFHGKFVV
Subjt:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEVGIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFVV

TrEMBL top hitse value%identityAlignment
A0A0A0K9L1 PHD-type domain-containing protein1.0e-3484.54Show/hide
Query:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEV-GIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFV
        +P VFEVVT IAKKQVKEKSST NGSKSKSSFKS EAEMQG  AR SQAREEV  +YEEDEDEH DTLC ACGENYASDEFWICCDI EKWFHGK V
Subjt:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEV-GIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFV

A0A1S3CGR0 PHD finger protein ALFIN-LIKE 3-like isoform X23.4e-3381.44Show/hide
Query:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEV-GIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFV
        +P VFEVVT IAKKQVKEKSS+ NGSKSKSSFKS EA+ QG  AR SQAREEV  +YEEDEDEH DTLC ACGENYASDEFWICCDI EKWFHGK V
Subjt:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEV-GIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFV

A0A1S4E514 PHD finger protein ALFIN-LIKE 3-like9.8e-4189.69Show/hide
Query:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEVGIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFVV
        MP VFEVVTNIAK+QVKEKSST NGSKSKSSFKSSEAEMQGTCAR SQAR+EV  YEED+DEH D LCRACGENYASDEFWICCDIYEKWFHGKFVV
Subjt:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEVGIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFVV

A0A5A7VHJ0 PHD finger protein ALFIN-LIKE 3-like9.8e-4189.69Show/hide
Query:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEVGIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFVV
        MP VFEVVTNIAK+QVKEKSST NGSKSKSSFKSSEAEMQGTCAR SQAR+EV  YEED+DEH D LCRACGENYASDEFWICCDIYEKWFHGKFVV
Subjt:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEVGIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFVV

A0A5D3BXQ0 PHD finger protein ALFIN-LIKE 3-like isoform X23.4e-3381.44Show/hide
Query:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEV-GIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFV
        +P VFEVVT IAKKQVKEKSS+ NGSKSKSSFKS EA+ QG  AR SQAREEV  +YEEDEDEH DTLC ACGENYASDEFWICCDI EKWFHGK V
Subjt:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEV-GIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFV

SwissProt top hitse value%identityAlignment
B8BJV8 PHD finger protein ALFIN-LIKE 83.3e-1749Show/hide
Query:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSS---EAEMQGTCARHSQAREEVGIYEEDEDE-HDDTLCRACGENYASDEFWICCDIYEKWFHGKFV
        +P ++EVVT  AKKQ KEK+  T+G  +KS  K S   E   +G      +  ++ G  EE+E+E H++TLC ACG+NY  DEFWICCD  E WFHGK V
Subjt:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSS---EAEMQGTCARHSQAREEVGIYEEDEDE-HDDTLCRACGENYASDEFWICCDIYEKWFHGKFV

O81488 PHD finger protein ALFIN-LIKE 49.2e-2053.47Show/hide
Query:  MPIVFEVVTNIAKKQVKEKSSTTNGS--KSKSSFK---SSEAEMQGTCARHSQAREEVGIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKF
        +P +FEVV   AKKQ K+KSS +N S  +SKSS K    S A+      +  +  EE G+ EEDEDE  +T C ACGE+YA+DEFWICCD+ E WFHGK 
Subjt:  MPIVFEVVTNIAKKQVKEKSSTTNGS--KSKSSFK---SSEAEMQGTCARHSQAREEVGIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKF

Query:  V
        V
Subjt:  V

Q2R837 PHD finger protein ALFIN-LIKE 83.3e-1749Show/hide
Query:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSS---EAEMQGTCARHSQAREEVGIYEEDEDE-HDDTLCRACGENYASDEFWICCDIYEKWFHGKFV
        +P ++EVVT  AKKQ KEK+  T+G  +KS  K S   E   +G      +  ++ G  EE+E+E H++TLC ACG+NY  DEFWICCD  E WFHGK V
Subjt:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSS---EAEMQGTCARHSQAREEVGIYEEDEDE-HDDTLCRACGENYASDEFWICCDIYEKWFHGKFV

Q5XEM9 PHD finger protein ALFIN-LIKE 56.0e-1950.94Show/hide
Query:  MPIVFEVVTNIAKKQVKE--KSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEVGI--------YEEDEDEHDDTLCRACGENYASDEFWICCDIYEKW
        +P V+EVVT  A+KQ KE   S+  NG++SKS+ K    E + +   H++  EE G+         +EDEDEH +TLC ACG+NYASDEFWICCD+ EKW
Subjt:  MPIVFEVVTNIAKKQVKE--KSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEVGI--------YEEDEDEHDDTLCRACGENYASDEFWICCDIYEKW

Query:  FHGKFV
        FHG+ V
Subjt:  FHGKFV

Q9M2B4 PHD finger protein ALFIN-LIKE 35.0e-1850.52Show/hide
Query:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREE-VGIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFV
        +P +FEVVT +AK + K  ++  NG+KSKS+ K   +E  G  ++  Q +EE   I E+DED+H +TLC ACG++  +DEFWICCD+ EKWFHGK V
Subjt:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREE-VGIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFV

Arabidopsis top hitse value%identityAlignment
AT3G42790.1 alfin-like 33.6e-1950.52Show/hide
Query:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREE-VGIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFV
        +P +FEVVT +AK + K  ++  NG+KSKS+ K   +E  G  ++  Q +EE   I E+DED+H +TLC ACG++  +DEFWICCD+ EKWFHGK V
Subjt:  MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREE-VGIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFV

AT5G05610.1 alfin-like 14.8e-1647.42Show/hide
Query:  MPIVFEVVTNIAKKQVKE-KSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEVGIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFV
        +P +FEVVT   +K +K+ K S   GSKS++  K S   ++G      +  EE   YE+++DEH DTLC +CG NY +DEFWICCD+ E+W+HGK V
Subjt:  MPIVFEVVTNIAKKQVKE-KSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEVGIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFV

AT5G05610.2 alfin-like 14.8e-1647.42Show/hide
Query:  MPIVFEVVTNIAKKQVKE-KSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEVGIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFV
        +P +FEVVT   +K +K+ K S   GSKS++  K S   ++G      +  EE   YE+++DEH DTLC +CG NY +DEFWICCD+ E+W+HGK V
Subjt:  MPIVFEVVTNIAKKQVKE-KSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEVGIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFV

AT5G20510.1 alfin-like 54.2e-2050.94Show/hide
Query:  MPIVFEVVTNIAKKQVKE--KSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEVGI--------YEEDEDEHDDTLCRACGENYASDEFWICCDIYEKW
        +P V+EVVT  A+KQ KE   S+  NG++SKS+ K    E + +   H++  EE G+         +EDEDEH +TLC ACG+NYASDEFWICCD+ EKW
Subjt:  MPIVFEVVTNIAKKQVKE--KSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEVGI--------YEEDEDEHDDTLCRACGENYASDEFWICCDIYEKW

Query:  FHGKFV
        FHG+ V
Subjt:  FHGKFV

AT5G26210.1 alfin-like 46.5e-2153.47Show/hide
Query:  MPIVFEVVTNIAKKQVKEKSSTTNGS--KSKSSFK---SSEAEMQGTCARHSQAREEVGIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKF
        +P +FEVV   AKKQ K+KSS +N S  +SKSS K    S A+      +  +  EE G+ EEDEDE  +T C ACGE+YA+DEFWICCD+ E WFHGK 
Subjt:  MPIVFEVVTNIAKKQVKEKSSTTNGS--KSKSSFK---SSEAEMQGTCARHSQAREEVGIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKF

Query:  V
        V
Subjt:  V


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAATTGTATTTGAAGTGGTTACCAATATTGCAAAGAAACAAGTTAAGGAAAAATCATCAACTACAAATGGTAGCAAATCCAAGTCAAGTTTTAAATCGAGTGAAGC
TGAAATGCAAGGAACATGCGCAAGGCATTCGCAGGCAAGGGAAGAGGTAGGGATATACGAAGAAGATGAAGACGAGCACGATGACACCTTATGTAGGGCATGCGGTGAGA
ACTATGCTTCAGATGAATTTTGGATTTGCTGTGATATCTATGAGAAATGGTTCCATGGGAAGTTTGTTGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAATTGTATTTGAAGTGGTTACCAATATTGCAAAGAAACAAGTTAAGGAAAAATCATCAACTACAAATGGTAGCAAATCCAAGTCAAGTTTTAAATCGAGTGAAGC
TGAAATGCAAGGAACATGCGCAAGGCATTCGCAGGCAAGGGAAGAGGTAGGGATATACGAAGAAGATGAAGACGAGCACGATGACACCTTATGTAGGGCATGCGGTGAGA
ACTATGCTTCAGATGAATTTTGGATTTGCTGTGATATCTATGAGAAATGGTTCCATGGGAAGTTTGTTGTATGA
Protein sequenceShow/hide protein sequence
MPIVFEVVTNIAKKQVKEKSSTTNGSKSKSSFKSSEAEMQGTCARHSQAREEVGIYEEDEDEHDDTLCRACGENYASDEFWICCDIYEKWFHGKFVV