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Pay0015182 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0015182
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr03:17516370..17518308
RNA-Seq ExpressionPay0015182
SyntenyPay0015182
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045262.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.2e-11198.58Show/hide
Query:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
        MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
Subjt:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM

Query:  ILRFDTPSSEIQTLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILTEGRHCKIEGFEEEVE
        ILRFDTPSSEIQ LHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILTEGRHCKIEGFEEEVE
Subjt:  ILRFDTPSSEIQTLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILTEGRHCKIEGFEEEVE

Query:  TQFQIILCPMMF
        TQFQIILCPM++
Subjt:  TQFQIILCPMMF

XP_008464344.1 PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]3.2e-13899.61Show/hide
Query:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
        MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
Subjt:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM

Query:  ILRFDTPSSEIQTLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILTEGRHCKIEGFEEEVE
        ILRFDTPSSEIQ LHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILTEGRHCKIEGFEEEVE
Subjt:  ILRFDTPSSEIQTLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILTEGRHCKIEGFEEEVE

Query:  TQFQIILCPMMFFLNFTYKANRVWFYKTKNNAYTLMVVPAYGIFGQYVIYFPFV
        TQFQIILCPMMFFLNFTYKANRVWFYKTKNNAYTLMVVPAYGIFGQYVIYFPFV
Subjt:  TQFQIILCPMMFFLNFTYKANRVWFYKTKNNAYTLMVVPAYGIFGQYVIYFPFV

XP_031743957.1 uncharacterized protein LOC116404737 [Cucumis sativus]1.4e-10475.4Show/hide
Query:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
        MFLVKL  F+PLLD+T FLA  S +NA +KFTP K F+I S+R P FIATLQLSP+WFT FSVD+ HSSKVSLESFHDA+LDGG F++M+IHLLDKTNQM
Subjt:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM

Query:  ILRFDTPSSEIQTLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILTEGRHCKIEGFEEEVE
        ILRFDTPSS+IQ LH ELTLSPPQ+ED++IGQHEL+ +K+FIV SK+LRR+IK+LPIFQNDSII V VT S++KFSIAS +I+ +EG HC+IEGFEEEVE
Subjt:  ILRFDTPSSEIQTLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILTEGRHCKIEGFEEEVE

Query:  TQFQIILCPMMFFLNFTYKANRVWFYKTKNNAYTLMVVPAYGIFGQYVIYFP
        TQFQI LCPM+FFLNFTY+A+RVWFYKTKNNAYT+M+VPA+GI+GQY IYFP
Subjt:  TQFQIILCPMMFFLNFTYKANRVWFYKTKNNAYTLMVVPAYGIFGQYVIYFP

XP_031743987.1 uncharacterized protein LOC116404759 [Cucumis sativus]1.1e-9390.36Show/hide
Query:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
        MFLVKL NFDPLLDATSF AQISFD+AD+KFTPSKFFII+SHRSPRFIATLQLSPQWFT+FSVD+DHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQ+
Subjt:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM

Query:  ILRFDTPSSEIQTLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILTEGRHCKIEGFEE
        ILRFDTPSSEIQ LHHEL LSPPQAEDNQIGQHELDE KYFIVKSKALRRIIK+LPIFQNDSI+ VDVTNSRVKFSIASKEI+L EG HCKIE  EE
Subjt:  ILRFDTPSSEIQTLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILTEGRHCKIEGFEE

XP_038875055.1 uncharacterized protein LOC120067580 [Benincasa hispida]2.5e-9874.21Show/hide
Query:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
        MFLVKL NF+PLLDATS+LAQIS + AD+KFTP +F++IA + SPRF+ATLQLS + FT +SVD++H+SKV LESFHDAILDGGSFASMTIHLL+K NQM
Subjt:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM

Query:  ILRFDTPSSEIQTLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILTEGRHCKIEGFEEEVE
        ILRF TPSSEI  LHHELT SPPQ  DN IG  +L+E K+FIVKS+ALRRIIK+LPIFQ+DS++ V VT+S++KFSIASKEI+L + +HC+I GFEEEVE
Subjt:  ILRFDTPSSEIQTLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILTEGRHCKIEGFEEEVE

Query:  TQFQIILCPMMFFLNFTYKANRVWFYKTKNNAYTLMVVPAYGIFGQYVIYFP
        TQFQIIL PM+FFLNFTYKAN+VWFYKTKNN+Y++M VPA+GI GQYVIYFP
Subjt:  TQFQIILCPMMFFLNFTYKANRVWFYKTKNNAYTLMVVPAYGIFGQYVIYFP

TrEMBL top hitse value%identityAlignment
A0A0A0K902 Uncharacterized protein6.9e-7892.59Show/hide
Query:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
        MFLVKL NFDPLLDATSF AQISFD+AD+KFTPSKFFII+SHRSPRFIATLQLSPQWFT+FSVD+DHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQ+
Subjt:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM

Query:  ILRFDTPSSEIQTLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS
        ILRFDTPSSEIQ LHHEL LSPPQAEDNQIGQHELDE KYFIVKSKALRRIIK+LPIFQNDS
Subjt:  ILRFDTPSSEIQTLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS

A0A1S3C8J1 uncharacterized protein LOC1034980105.3e-7065.47Show/hide
Query:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
        MFLV+L+ F+PL+DATS LAQ++ D AD+KFTP    II S+RSP+F+ATLQLS + FT FSVD++ SSKVSL+ FHDA+LDGGSF+SMTIHLLD TNQM
Subjt:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM

Query:  ILRFDTPSSEIQTLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILT-EGRHCKIEGFEEEV
        +LRF+TPS ++  LHHEL LSPPQAE+  +GQ E     +F V S+ LRRIIK+LP+F  D+ +SV VT S+VKFSI SKEIILT EG HCKI G+E EV
Subjt:  ILRFDTPSSEIQTLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILT-EGRHCKIEGFEEEV

Query:  ETQFQIILCPMMFFLNFTYKANR
        ET+ Q++L PMMFFLNFTY+AN+
Subjt:  ETQFQIILCPMMFFLNFTYKANR

A0A1S3CL88 uncharacterized protein LOC1035022501.6e-13899.61Show/hide
Query:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
        MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
Subjt:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM

Query:  ILRFDTPSSEIQTLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILTEGRHCKIEGFEEEVE
        ILRFDTPSSEIQ LHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILTEGRHCKIEGFEEEVE
Subjt:  ILRFDTPSSEIQTLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILTEGRHCKIEGFEEEVE

Query:  TQFQIILCPMMFFLNFTYKANRVWFYKTKNNAYTLMVVPAYGIFGQYVIYFPFV
        TQFQIILCPMMFFLNFTYKANRVWFYKTKNNAYTLMVVPAYGIFGQYVIYFPFV
Subjt:  TQFQIILCPMMFFLNFTYKANRVWFYKTKNNAYTLMVVPAYGIFGQYVIYFPFV

A0A5D3BV00 Uncharacterized protein1.2e-6973.12Show/hide
Query:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
        MFLVKL  F+PLLD+TS+LAQ S DNAD+KF P K F+I  +RSPRF ATLQLSP+WF+ +SVD+ HSSKVSLESFHDA+LDGG F+SM+IHLLDKTNQM
Subjt:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM

Query:  ILRFDTPSSEIQTLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILTE
         LRFDTPSS+IQ  HHELTLSPPQ+ED QI +HELD  K+ IVKSK+LRR+IK+LPIF NDSII V VT S++KFSIASK I+L+E
Subjt:  ILRFDTPSSEIQTLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILTE

A0A5D3DZ07 LINE-1 retrotransposable element ORF2 protein5.6e-11298.58Show/hide
Query:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
        MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
Subjt:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM

Query:  ILRFDTPSSEIQTLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILTEGRHCKIEGFEEEVE
        ILRFDTPSSEIQ LHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILTEGRHCKIEGFEEEVE
Subjt:  ILRFDTPSSEIQTLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILTEGRHCKIEGFEEEVE

Query:  TQFQIILCPMMF
        TQFQIILCPM++
Subjt:  TQFQIILCPMMF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGGTGAAGCTTAAAAACTTCGATCCTCTTCTTGACGCAACCTCCTTTCTTGCTCAAATTTCCTTCGACAATGCTGACCTGAAATTCACGCCTTCGAAATTCTT
CATAATTGCCTCGCACCGTTCCCCTCGCTTCATCGCAACGCTACAATTGTCCCCACAATGGTTTACTACTTTTTCCGTTGATAATGATCATAGTTCTAAGGTTTCCCTTG
AATCCTTCCATGATGCTATATTGGATGGTGGAAGTTTTGCTTCAATGACAATCCATCTTTTGGACAAAACAAACCAAATGATCCTTCGATTTGATACTCCTTCAAGCGAA
ATCCAAACTTTGCATCATGAATTGACATTGTCACCTCCGCAAGCAGAAGACAATCAAATTGGCCAACATGAACTTGACGAAAGAAAATATTTCATAGTTAAATCTAAGGC
ATTAAGACGAATTATCAAAGATTTACCTATCTTCCAAAATGATTCAATCATTAGTGTTGATGTAACAAATTCTCGAGTCAAGTTCTCAATTGCATCCAAGGAGATTATTC
TTACTGAGGGTCGACACTGTAAAATCGAAGGTTTTGAAGAAGAAGTTGAAACTCAATTCCAAATCATTCTTTGTCCTATGATGTTTTTCCTCAATTTTACATATAAAGCA
AATAGGGTTTGGTTTTATAAGACAAAAAACAATGCTTATACTCTAATGGTTGTCCCAGCTTATGGAATTTTTGGACAATATGTAATCTATTTCCCCTTCGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGGTGAAGCTTAAAAACTTCGATCCTCTTCTTGACGCAACCTCCTTTCTTGCTCAAATTTCCTTCGACAATGCTGACCTGAAATTCACGCCTTCGAAATTCTT
CATAATTGCCTCGCACCGTTCCCCTCGCTTCATCGCAACGCTACAATTGTCCCCACAATGGTTTACTACTTTTTCCGTTGATAATGATCATAGTTCTAAGGTTTCCCTTG
AATCCTTCCATGATGCTATATTGGATGGTGGAAGTTTTGCTTCAATGACAATCCATCTTTTGGACAAAACAAACCAAATGATCCTTCGATTTGATACTCCTTCAAGCGAA
ATCCAAACTTTGCATCATGAATTGACATTGTCACCTCCGCAAGCAGAAGACAATCAAATTGGCCAACATGAACTTGACGAAAGAAAATATTTCATAGTTAAATCTAAGGC
ATTAAGACGAATTATCAAAGATTTACCTATCTTCCAAAATGATTCAATCATTAGTGTTGATGTAACAAATTCTCGAGTCAAGTTCTCAATTGCATCCAAGGAGATTATTC
TTACTGAGGGTCGACACTGTAAAATCGAAGGTTTTGAAGAAGAAGTTGAAACTCAATTCCAAATCATTCTTTGTCCTATGATGTTTTTCCTCAATTTTACATATAAAGCA
AATAGGGTTTGGTTTTATAAGACAAAAAACAATGCTTATACTCTAATGGTTGTCCCAGCTTATGGAATTTTTGGACAATATGTAATCTATTTCCCCTTCGTATGACATGT
GGG
Protein sequenceShow/hide protein sequence
MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQMILRFDTPSSE
IQTLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASKEIILTEGRHCKIEGFEEEVETQFQIILCPMMFFLNFTYKA
NRVWFYKTKNNAYTLMVVPAYGIFGQYVIYFPFV