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Pay0015233 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0015233
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr10:6158487..6158837
RNA-Seq ExpressionPay0015233
SyntenyPay0015233
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052183.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.4e-5897.41Show/hide
Query:  MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDR
        MNLNEKLQQNDGAEMVDKH+FKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIA TIEYGIWYSKVSDFKLCGFT+SDWASSLDDR
Subjt:  MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDR

Query:  RSVSANVFTLGSGVIT
        RSVSANVFTLGSGVIT
Subjt:  RSVSANVFTLGSGVIT

KAA0056051.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa]2.0e-4784.48Show/hide
Query:  MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDR
        +N+NEKLQQNDGAEM +  +F+S VGGLIYLTHTR DISYSIGVISRFMQ PSRDHF AAK+VMRYIAGTIEYGIW SKVS+FKLCGFT+SDWASSL DR
Subjt:  MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDR

Query:  RSVSANVFTLGSGVIT
        RSVSANVFTLG GVIT
Subjt:  RSVSANVFTLGSGVIT

TYK27736.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa]2.2e-4986.21Show/hide
Query:  MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDR
        MN+NEKLQQNDGAEM +  +F+S VGGLIYLTHTR DISYSIGVI +FMQ PSRDHF AAK+VMRYIAGTIEYGIWYSKVSDFKLCGFT+SDWASSLDDR
Subjt:  MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDR

Query:  RSVSANVFTLGSGVIT
        RSVSANVFTLG GVIT
Subjt:  RSVSANVFTLGSGVIT

TYK28116.1 Zinc finger, CCHC-type [Cucumis melo var. makuwa]4.9e-4986.21Show/hide
Query:  MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDR
        MN+NEKLQQNDGAEM    +F+SFVGGLIYLTHTR DISYSI VIS FMQCPSRDHF A K+VMRYIAGTIEYGIWYSKVSD KLCGF +SDWASSLDDR
Subjt:  MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDR

Query:  RSVSANVFTLGSGVIT
        RSVSANVFTLGSGVIT
Subjt:  RSVSANVFTLGSGVIT

XP_016902732.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]4.4e-5897.41Show/hide
Query:  MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDR
        MNLNEKLQQNDGAEMVDKH+FKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIA TIEYGIWYSKVSDFKLCGFT+SDWASSLDDR
Subjt:  MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDR

Query:  RSVSANVFTLGSGVIT
        RSVSANVFTLGSGVIT
Subjt:  RSVSANVFTLGSGVIT

TrEMBL top hitse value%identityAlignment
A0A1S4E3C8 uncharacterized mitochondrial protein AtMg00810-like2.1e-5897.41Show/hide
Query:  MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDR
        MNLNEKLQQNDGAEMVDKH+FKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIA TIEYGIWYSKVSDFKLCGFT+SDWASSLDDR
Subjt:  MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDR

Query:  RSVSANVFTLGSGVIT
        RSVSANVFTLGSGVIT
Subjt:  RSVSANVFTLGSGVIT

A0A5A7URA0 Putative gag-pol polyprotein, identical9.9e-4884.48Show/hide
Query:  MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDR
        +N+NEKLQQNDGAEM +  +F+S VGGLIYLTHTR DISYSIGVISRFMQ PSRDHF AAK+VMRYIAGTIEYGIW SKVS+FKLCGFT+SDWASSL DR
Subjt:  MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDR

Query:  RSVSANVFTLGSGVIT
        RSVSANVFTLG GVIT
Subjt:  RSVSANVFTLGSGVIT

A0A5D3BFF7 Putative mitochondrial protein2.1e-5897.41Show/hide
Query:  MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDR
        MNLNEKLQQNDGAEMVDKH+FKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIA TIEYGIWYSKVSDFKLCGFT+SDWASSLDDR
Subjt:  MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDR

Query:  RSVSANVFTLGSGVIT
        RSVSANVFTLGSGVIT
Subjt:  RSVSANVFTLGSGVIT

A0A5D3DVG4 Putative gag-pol polyprotein, identical1.1e-4986.21Show/hide
Query:  MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDR
        MN+NEKLQQNDGAEM +  +F+S VGGLIYLTHTR DISYSIGVI +FMQ PSRDHF AAK+VMRYIAGTIEYGIWYSKVSDFKLCGFT+SDWASSLDDR
Subjt:  MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDR

Query:  RSVSANVFTLGSGVIT
        RSVSANVFTLG GVIT
Subjt:  RSVSANVFTLGSGVIT

A0A5D3DWI5 Zinc finger, CCHC-type2.4e-4986.21Show/hide
Query:  MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDR
        MN+NEKLQQNDGAEM    +F+SFVGGLIYLTHTR DISYSI VIS FMQCPSRDHF A K+VMRYIAGTIEYGIWYSKVSD KLCGF +SDWASSLDDR
Subjt:  MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDR

Query:  RSVSANVFTLGSGVIT
        RSVSANVFTLGSGVIT
Subjt:  RSVSANVFTLGSGVIT

SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1611.2e-1336.08Show/hide
Query:  FKSFVGGLIYL-THTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDRRSVSANVFTLGSGVIT
        + S VG ++YL   TR D++ ++GV+S+F   P   H+ A K+V+RY+  T  YG+ +++    KL G++++DWA  ++ RRS S  +F L  G ++
Subjt:  FKSFVGGLIYL-THTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDRRSVSANVFTLGSGVIT

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.7e-1237Show/hide
Query:  KHQFKSFVGGLIY-LTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDRRSVSANVFTLGSGVIT
        K  + S VG L+Y +  TR DI++++GV+SRF++ P ++H++A K ++RY+ GT    + +   SD  L G+T++D A  +D+R+S +  +FT   G I+
Subjt:  KHQFKSFVGGLIY-LTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDRRSVSANVFTLGSGVIT

P92519 Uncharacterized mitochondrial protein AtMg008108.2e-1539.42Show/hide
Query:  AEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDRRSVSANVFTLGS
        A+  D   F+S VG L YLT TR DISY++ ++ + M  P+   FD  K+V+RY+ GTI +G++  K S   +  F +SDWA     RRS +     LG 
Subjt:  AEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDRRSVSANVFTLGS

Query:  GVIT
         +I+
Subjt:  GVIT

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.5e-1636.79Show/hide
Query:  KLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDRRSVSA
        KL    G ++ D  +++  VG L YL  TR DISY++  +S+FM  P+ +H  A K+++RY+AGT  +GI+  K +   L  ++++DWA   DD  S + 
Subjt:  KLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDRRSVSA

Query:  NVFTLG
         +  LG
Subjt:  NVFTLG

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE25.1e-1736.04Show/hide
Query:  MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDR
        M  + KL  + G ++ D  +++  VG L YL  TR D+SY++  +S++M  P+ DH++A K+V+RY+AGT ++GI+  K +   L  ++++DWA   DD 
Subjt:  MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDR

Query:  RSVSANVFTLG
         S +  +  LG
Subjt:  RSVSANVFTLG

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 85.4e-1431.78Show/hide
Query:  NDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDRRSVSANVFT
        + G + VD   ++  +G L+YL  TR DIS+++  +S+F + P   H  A  +++ YI GT+  G++YS  ++ +L  F+++ + S  D RRS +     
Subjt:  NDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDRRSVSANVFT

Query:  LGSGVIT
        LG+ +I+
Subjt:  LGSGVIT

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.1e-1139.47Show/hide
Query:  IYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDRRSVS
        +YLT TR D+++++  +S+F          A  +V+ Y+ GT+  G++YS  SD +L  F +SDWAS  D RRSV+
Subjt:  IYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDRRSVS

ATMG00810.1 DNA/RNA polymerases superfamily protein5.8e-1639.42Show/hide
Query:  AEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDRRSVSANVFTLGS
        A+  D   F+S VG L YLT TR DISY++ ++ + M  P+   FD  K+V+RY+ GTI +G++  K S   +  F +SDWA     RRS +     LG 
Subjt:  AEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDRRSVSANVFTLGS

Query:  GVIT
         +I+
Subjt:  GVIT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTGAATGAGAAGCTGCAACAAAATGATGGTGCAGAGATGGTCGATAAGCATCAGTTTAAAAGCTTTGTTGGAGGCTTGATTTATCTAACTCATACCCGT
CATGATATTTCGTATTCTATTGGTGTGATTTCTAGGTTTATGCAATGTCCTTCAAGGGATCATTTCGACGCAGCAAAGCAGGTTATGCGATACATTGCTGGAACT
ATAGAATATGGCATTTGGTACTCTAAAGTTTCTGATTTCAAATTATGCGGGTTCACAGAGAGTGATTGGGCGAGCTCCTTGGATGATAGGCGAAGTGTTTCAGCG
AATGTTTTCACTTTAGGATCAGGAGTTATTACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTGAATGAGAAGCTGCAACAAAATGATGGTGCAGAGATGGTCGATAAGCATCAGTTTAAAAGCTTTGTTGGAGGCTTGATTTATCTAACTCATACCCGT
CATGATATTTCGTATTCTATTGGTGTGATTTCTAGGTTTATGCAATGTCCTTCAAGGGATCATTTCGACGCAGCAAAGCAGGTTATGCGATACATTGCTGGAACT
ATAGAATATGGCATTTGGTACTCTAAAGTTTCTGATTTCAAATTATGCGGGTTCACAGAGAGTGATTGGGCGAGCTCCTTGGATGATAGGCGAAGTGTTTCAGCG
AATGTTTTCACTTTAGGATCAGGAGTTATTACTTAA
Protein sequenceShow/hide protein sequence
MNLNEKLQQNDGAEMVDKHQFKSFVGGLIYLTHTRHDISYSIGVISRFMQCPSRDHFDAAKQVMRYIAGTIEYGIWYSKVSDFKLCGFTESDWASSLDDRRSVSA
NVFTLGSGVIT