| GenBank top hits | e value | %identity | Alignment |
|---|
| GAU21337.1 hypothetical protein TSUD_189240 [Trifolium subterraneum] | 7.1e-76 | 44.28 | Show/hide |
Query: MDSLESNRTWHLVDLPPGCKAIGCKWVLRKKLKLD-----------------------------------------------------------------
MDSLESN+TWHLVDLPPGCK IGCKW+L+KKLK D
Subjt: MDSLESNRTWHLVDLPPGCKAIGCKWVLRKKLKLD-----------------------------------------------------------------
Query: --------------------------------------ESFDNLLMSKEFRVSESDKYIYYKTEDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFD
E FDNL++S FR++ESDK IYYK + +C IICLYVDDMLIFGSNL +N+VKS+L NFD
Subjt: --------------------------------------ESFDNLLMSKEFRVSESDKYIYYKTEDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFD
Query: MKDIGEADVILGIKITRTENGIFLDQSHYIEKILNKYNYFD-----------------------------------------------------------
MKD+GEA VILGIKITR+E GI DQSHY+EKIL KY Y+D
Subjt: MKDIGEADVILGIKITRTENGIFLDQSHYIEKILNKYNYFD-----------------------------------------------------------
Query: -----------MRYLKKIQNLGLHYNKFPAVLEGYSDADWNSLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWLRSLLSE
MRYLK+ NLGLHY +FPAVLEGYSDADWN+LSDDSKATS +IF+I GGAV+WKSKK ILAQSTMESEMIALA ASEEASWLR LLSE
Subjt: -----------MRYLKKIQNLGLHYNKFPAVLEGYSDADWNSLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWLRSLLSE
Query: IP
IP
Subjt: IP
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| GAU26739.1 hypothetical protein TSUD_317370 [Trifolium subterraneum] | 1.9e-76 | 47.65 | Show/hide |
Query: MDSLESNRTWHLVDLPPGCKAIGCKWVLRKKLKLD-----------------------------------------------------------------
MDSLESN+TWHLV+LPPGCK IGCKW+L+KKLK D
Subjt: MDSLESNRTWHLVDLPPGCKAIGCKWVLRKKLKLD-----------------------------------------------------------------
Query: --------------------------------------ESFDNLLMSKEFRVSESDKYIYYKTEDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFD
E FDNL++S FR++ESDK IYYK + +C IICLYVDDMLIFGSNL +N+VKS+L NFD
Subjt: --------------------------------------ESFDNLLMSKEFRVSESDKYIYYKTEDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFD
Query: MKDIGEADVILGIKITRTENGIFLDQSHYIEKILNKYNYFDMR------------------------YLK-----KIQNLGLHYNKFPAVLEGYSDADWN
MKD+GEA VILGIK TR+E GI LDQSHY+EKIL KY YFD + Y + NLGLHY +FPAVLEGYSD+DWN
Subjt: MKDIGEADVILGIKITRTENGIFLDQSHYIEKILNKYNYFDMR------------------------YLK-----KIQNLGLHYNKFPAVLEGYSDADWN
Query: SLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWLRSLLSEIP
+LSDDSKATS +IF+I GGAV+WKSKK ILAQSTMESEMIALA SEEASWLR LLSEIP
Subjt: SLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWLRSLLSEIP
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| GAU47690.1 hypothetical protein TSUD_245810 [Trifolium subterraneum] | 1.1e-76 | 44.53 | Show/hide |
Query: MDSLESNRTWHLVDLPPGCKAIGCKWVLRKKLKLD-----------------------------------------------------------------
MDSLESN+TWHLVDLPPGCK IGCKW+L+KKLK D
Subjt: MDSLESNRTWHLVDLPPGCKAIGCKWVLRKKLKLD-----------------------------------------------------------------
Query: --------------------------------------ESFDNLLMSKEFRVSESDKYIYYKTEDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFD
E FDNL++S FR++ESDK IYYK + +C IICLYVDDMLIFGSNL +N+VKS+L NFD
Subjt: --------------------------------------ESFDNLLMSKEFRVSESDKYIYYKTEDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFD
Query: MKDIGEADVILGIKITRTENGIFLDQSHYIEKILNKYNYFD-----------------------------------------------------------
MKD+GEA VILGIKITR+E GI LDQSHY+EKIL KY YFD
Subjt: MKDIGEADVILGIKITRTENGIFLDQSHYIEKILNKYNYFD-----------------------------------------------------------
Query: -----------MRYLKKIQNLGLHYNKFPAVLEGYSDADWNSLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWLRSLLSE
MRYLK+ NLGLHY +FPAVLEGYSDADWN+LSDDSKATS +IF+I GGAV+WKSKK ILAQSTME+EMIALA ASEEASWLR LLSE
Subjt: -----------MRYLKKIQNLGLHYNKFPAVLEGYSDADWNSLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWLRSLLSE
Query: IP
IP
Subjt: IP
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| KAA0036533.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | 1.2e-78 | 46.98 | Show/hide |
Query: MDSLESNRTWHLVDLPPGCKAIGCKWVLRKKLKLDES---------------------------------------------------------------
MDSLESNRTWHLVDLPP CKAIGCKWVLRKK K D S
Subjt: MDSLESNRTWHLVDLPPGCKAIGCKWVLRKKLKLDES---------------------------------------------------------------
Query: ----------------------------------------FDNLLMSKEFRVSESDKYIYYKTEDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFD
FDNLLMSK F+V+ES+K IYYKT+ RLC+IICLYVDDMLIFGSNLH+INDVKSML+ANFD
Subjt: ----------------------------------------FDNLLMSKEFRVSESDKYIYYKTEDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFD
Query: MKDIGEADVILGIKITRTENGIFLDQSHYIEKILNKYNYFD-----------------------------------------------------------
MKD+GEADVIL IKITRTENGIFLDQSHYIEKIL KYNYFD
Subjt: MKDIGEADVILGIKITRTENGIFLDQSHYIEKILNKYNYFD-----------------------------------------------------------
Query: -----------MRYLKKIQNLGLHYNKFPAVLEGYSDADWNSLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWLRSLL
MRYL+K Q+LGLHYNKFP V EGY+DADWNSLSD+SKATS YIFNI GGAVAWK KK IL +S M+SEMI LA A+ EA WLRSLL
Subjt: -----------MRYLKKIQNLGLHYNKFPAVLEGYSDADWNSLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWLRSLL
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| KAA0058878.1 putative polyprotein [Cucumis melo var. makuwa] | 4.3e-81 | 47.39 | Show/hide |
Query: MDSLESNRTWHLVDLPPGCKAIGCKWVLRKKLKLD-----------------------------------------------------------------
MDSLESNRTWHLVDLP GCK IG KW+LRKK+KLD
Subjt: MDSLESNRTWHLVDLPPGCKAIGCKWVLRKKLKLD-----------------------------------------------------------------
Query: --------------------------------------ESFDNLLMSKEFRVSESDKYIYYKTEDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFD
E FD LLMSK F+V+ESDK +YYKT+ RLC+IICLYVDDML F SNLHVINDVKSML+ NFD
Subjt: --------------------------------------ESFDNLLMSKEFRVSESDKYIYYKTEDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFD
Query: MKDIGEADVILGIKITRTENGIFLDQSHYIEKILNKYNYFD-----------------------------------------------------------
MKD+GEAD+ILGIKITRT+NGI LDQS+YIEKIL KYNYFD
Subjt: MKDIGEADVILGIKITRTENGIFLDQSHYIEKILNKYNYFD-----------------------------------------------------------
Query: -----------MRYLKKIQNLGLHYNKFPAVLEGYSDADWNSLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWLRSLLSE
MRYLKK QNLGLHYNKF VLEGY+D DWNSLSDDSKATS YIFNI GG VAWKSKK ILAQS MESEMIALA AS+EASWL+SLLSE
Subjt: -----------MRYLKKIQNLGLHYNKFPAVLEGYSDADWNSLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWLRSLLSE
Query: IPT
IPT
Subjt: IPT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2Z6MWZ1 Reverse transcriptase Ty1/copia-type domain-containing protein | 3.4e-76 | 44.28 | Show/hide |
Query: MDSLESNRTWHLVDLPPGCKAIGCKWVLRKKLKLD-----------------------------------------------------------------
MDSLESN+TWHLVDLPPGCK IGCKW+L+KKLK D
Subjt: MDSLESNRTWHLVDLPPGCKAIGCKWVLRKKLKLD-----------------------------------------------------------------
Query: --------------------------------------ESFDNLLMSKEFRVSESDKYIYYKTEDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFD
E FDNL++S FR++ESDK IYYK + +C IICLYVDDMLIFGSNL +N+VKS+L NFD
Subjt: --------------------------------------ESFDNLLMSKEFRVSESDKYIYYKTEDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFD
Query: MKDIGEADVILGIKITRTENGIFLDQSHYIEKILNKYNYFD-----------------------------------------------------------
MKD+GEA VILGIKITR+E GI DQSHY+EKIL KY Y+D
Subjt: MKDIGEADVILGIKITRTENGIFLDQSHYIEKILNKYNYFD-----------------------------------------------------------
Query: -----------MRYLKKIQNLGLHYNKFPAVLEGYSDADWNSLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWLRSLLSE
MRYLK+ NLGLHY +FPAVLEGYSDADWN+LSDDSKATS +IF+I GGAV+WKSKK ILAQSTMESEMIALA ASEEASWLR LLSE
Subjt: -----------MRYLKKIQNLGLHYNKFPAVLEGYSDADWNSLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWLRSLLSE
Query: IP
IP
Subjt: IP
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| A0A2Z6N5E8 Reverse transcriptase Ty1/copia-type domain-containing protein | 9.0e-77 | 47.65 | Show/hide |
Query: MDSLESNRTWHLVDLPPGCKAIGCKWVLRKKLKLD-----------------------------------------------------------------
MDSLESN+TWHLV+LPPGCK IGCKW+L+KKLK D
Subjt: MDSLESNRTWHLVDLPPGCKAIGCKWVLRKKLKLD-----------------------------------------------------------------
Query: --------------------------------------ESFDNLLMSKEFRVSESDKYIYYKTEDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFD
E FDNL++S FR++ESDK IYYK + +C IICLYVDDMLIFGSNL +N+VKS+L NFD
Subjt: --------------------------------------ESFDNLLMSKEFRVSESDKYIYYKTEDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFD
Query: MKDIGEADVILGIKITRTENGIFLDQSHYIEKILNKYNYFDMR------------------------YLK-----KIQNLGLHYNKFPAVLEGYSDADWN
MKD+GEA VILGIK TR+E GI LDQSHY+EKIL KY YFD + Y + NLGLHY +FPAVLEGYSD+DWN
Subjt: MKDIGEADVILGIKITRTENGIFLDQSHYIEKILNKYNYFDMR------------------------YLK-----KIQNLGLHYNKFPAVLEGYSDADWN
Query: SLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWLRSLLSEIP
+LSDDSKATS +IF+I GGAV+WKSKK ILAQSTMESEMIALA SEEASWLR LLSEIP
Subjt: SLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWLRSLLSEIP
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| A0A2Z6PC97 CCHC-type domain-containing protein | 5.3e-77 | 44.53 | Show/hide |
Query: MDSLESNRTWHLVDLPPGCKAIGCKWVLRKKLKLD-----------------------------------------------------------------
MDSLESN+TWHLVDLPPGCK IGCKW+L+KKLK D
Subjt: MDSLESNRTWHLVDLPPGCKAIGCKWVLRKKLKLD-----------------------------------------------------------------
Query: --------------------------------------ESFDNLLMSKEFRVSESDKYIYYKTEDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFD
E FDNL++S FR++ESDK IYYK + +C IICLYVDDMLIFGSNL +N+VKS+L NFD
Subjt: --------------------------------------ESFDNLLMSKEFRVSESDKYIYYKTEDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFD
Query: MKDIGEADVILGIKITRTENGIFLDQSHYIEKILNKYNYFD-----------------------------------------------------------
MKD+GEA VILGIKITR+E GI LDQSHY+EKIL KY YFD
Subjt: MKDIGEADVILGIKITRTENGIFLDQSHYIEKILNKYNYFD-----------------------------------------------------------
Query: -----------MRYLKKIQNLGLHYNKFPAVLEGYSDADWNSLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWLRSLLSE
MRYLK+ NLGLHY +FPAVLEGYSDADWN+LSDDSKATS +IF+I GGAV+WKSKK ILAQSTME+EMIALA ASEEASWLR LLSE
Subjt: -----------MRYLKKIQNLGLHYNKFPAVLEGYSDADWNSLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWLRSLLSE
Query: IP
IP
Subjt: IP
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| A0A5A7T0X0 Retrotransposon protein, putative, Ty1-copia subclass | 5.7e-79 | 46.98 | Show/hide |
Query: MDSLESNRTWHLVDLPPGCKAIGCKWVLRKKLKLDES---------------------------------------------------------------
MDSLESNRTWHLVDLPP CKAIGCKWVLRKK K D S
Subjt: MDSLESNRTWHLVDLPPGCKAIGCKWVLRKKLKLDES---------------------------------------------------------------
Query: ----------------------------------------FDNLLMSKEFRVSESDKYIYYKTEDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFD
FDNLLMSK F+V+ES+K IYYKT+ RLC+IICLYVDDMLIFGSNLH+INDVKSML+ANFD
Subjt: ----------------------------------------FDNLLMSKEFRVSESDKYIYYKTEDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFD
Query: MKDIGEADVILGIKITRTENGIFLDQSHYIEKILNKYNYFD-----------------------------------------------------------
MKD+GEADVIL IKITRTENGIFLDQSHYIEKIL KYNYFD
Subjt: MKDIGEADVILGIKITRTENGIFLDQSHYIEKILNKYNYFD-----------------------------------------------------------
Query: -----------MRYLKKIQNLGLHYNKFPAVLEGYSDADWNSLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWLRSLL
MRYL+K Q+LGLHYNKFP V EGY+DADWNSLSD+SKATS YIFNI GGAVAWK KK IL +S M+SEMI LA A+ EA WLRSLL
Subjt: -----------MRYLKKIQNLGLHYNKFPAVLEGYSDADWNSLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWLRSLL
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| A0A5D3DJH9 Putative polyprotein | 2.1e-81 | 47.39 | Show/hide |
Query: MDSLESNRTWHLVDLPPGCKAIGCKWVLRKKLKLD-----------------------------------------------------------------
MDSLESNRTWHLVDLP GCK IG KW+LRKK+KLD
Subjt: MDSLESNRTWHLVDLPPGCKAIGCKWVLRKKLKLD-----------------------------------------------------------------
Query: --------------------------------------ESFDNLLMSKEFRVSESDKYIYYKTEDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFD
E FD LLMSK F+V+ESDK +YYKT+ RLC+IICLYVDDML F SNLHVINDVKSML+ NFD
Subjt: --------------------------------------ESFDNLLMSKEFRVSESDKYIYYKTEDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFD
Query: MKDIGEADVILGIKITRTENGIFLDQSHYIEKILNKYNYFD-----------------------------------------------------------
MKD+GEAD+ILGIKITRT+NGI LDQS+YIEKIL KYNYFD
Subjt: MKDIGEADVILGIKITRTENGIFLDQSHYIEKILNKYNYFD-----------------------------------------------------------
Query: -----------MRYLKKIQNLGLHYNKFPAVLEGYSDADWNSLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWLRSLLSE
MRYLKK QNLGLHYNKF VLEGY+D DWNSLSDDSKATS YIFNI GG VAWKSKK ILAQS MESEMIALA AS+EASWL+SLLSE
Subjt: -----------MRYLKKIQNLGLHYNKFPAVLEGYSDADWNSLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWLRSLLSE
Query: IPT
IPT
Subjt: IPT
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.3e-08 | 35.29 | Show/hide |
Query: ESFDNLLMSKEFRVSESDKYIYYKTEDRL--CVIICLYVDDMLIFGSNLHVINDVKSMLNANFDMKDIGEADVILGIKITRTENGIFLDQSHYIEKILNK
E F+ L EF S D+ IY + + + + LYVDD++I ++ +N+ K L F M D+ E +GI+I E+ I+L QS Y++KIL+K
Subjt: ESFDNLLMSKEFRVSESDKYIYYKTEDRL--CVIICLYVDDMLIFGSNLHVINDVKSMLNANFDMKDIGEADVILGIKITRTENGIFLDQSHYIEKILNK
Query: YN
+N
Subjt: YN
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| P0CV72 Secreted RxLR effector protein 161 | 9.8e-12 | 44.05 | Show/hide |
Query: MRYLKKIQNLGLHYNKF-PAVLEGYSDADWNSLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWL
+RYL+ Q GL + + A L GYSDADW + ++TS Y+F + GG V+W+SKK +A S+ E E +AL+ A++EA WL
Subjt: MRYLKKIQNLGLHYNKF-PAVLEGYSDADWNSLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.3e-19 | 26.94 | Show/hide |
Query: FDNLLMSKEFRVSESDKYIYYKT-EDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFDMKDIGEADVILGIKIT--RTENGIFLDQSHYIEKILNKY
FD+ + S+ + + SD +Y+K + +I+ LYVDDMLI G + +I +K L+ +FDMKD+G A ILG+KI RT ++L Q YIE++L ++
Subjt: FDNLLMSKEFRVSESDKYIYYKT-EDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFDMKDIGEADVILGIKIT--RTENGIFLDQSHYIEKILNKY
Query: NY-----------------------------------------------------------------------------FDMRYLKKIQNLGLHYNKFPA
N + +RYL+ L +
Subjt: NY-----------------------------------------------------------------------------FDMRYLKKIQNLGLHYNKFPA
Query: VLEGYSDADWNSLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWLRSLLSEI
+L+GY+DAD D+ K+++ Y+F +GGA++W+SK +A ST E+E IA +E WL+ L E+
Subjt: VLEGYSDADWNSLSDDSKATSSYIFNITGGAVAWKSKKLAILAQSTMESEMIALAAASEEASWLRSLLSEI
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.8e-05 | 31.25 | Show/hide |
Query: DESFDNLLMSKEFRVSESDKYIYYKTEDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFDMKDIGEADVILGIKITRTENG-IFLDQSHYIEK
+E +N L F E + +Y+++ + I +YVDD+L+ + + + VK L + MKD+G+ D LG+ I ++ NG I L YI K
Subjt: DESFDNLLMSKEFRVSESDKYIYYKTEDRLCVIICLYVDDMLIFGSNLHVINDVKSMLNANFDMKDIGEADVILGIKITRTENG-IFLDQSHYIEK
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 1.9e-07 | 39.73 | Show/hide |
Query: ICLYVDDMLIFGSNLHVINDVKSMLNANFDMKDIGEADVILGIKITRTENGIFLDQSHYIEKILNKYNYFDMR
+ LYVDD+L+ GS+ ++N + L++ F MKD+G LGI+I +G+FL Q+ Y E+ILN D +
Subjt: ICLYVDDMLIFGSNLHVINDVKSMLNANFDMKDIGEADVILGIKITRTENGIFLDQSHYIEKILNKYNYFDMR
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