; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0015268 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0015268
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Descriptionserine/arginine-rich splicing factor SR34A
Genome locationchr09:24212993..24224661
RNA-Seq ExpressionPay0015268
SyntenyPay0015268
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011654574.2 serine/arginine-rich splicing factor SR34A [Cucumis sativus]2.9e-12684.82Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYG----
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYG    
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYG----

Query:  ------------------------------GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKL
                                      GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKL
Subjt:  ------------------------------GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKL

Query:  DDTEFRNPWARAYIRVKKYDGSPT----------RSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQARE
        DDTEFRNPWARAYIRVKKYDGSPT          RSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSP+KSSRPRSKSRSGSPRQARE
Subjt:  DDTEFRNPWARAYIRVKKYDGSPT----------RSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQARE

Query:  ESE
         SE
Subjt:  ESE

XP_022137780.1 serine/arginine-rich splicing factor SR34A [Momordica charantia]3.2e-12590.61Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----

Query:  -----------GGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKK
                   GGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD+EGTFGIVDYTNYDDMKYAIRKLDDTEF+NPWARAYIRVKK
Subjt:  -----------GGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKK

Query:  YDGSPTRSRSRSRSRSRSRSR--SRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREESE
        YDGSPTRSRSRSRSRSRSRSR  SRSR+ARRNRSKS E RSVSRSVSRSRSPSPVKSSRPRSKSRSGSPR+ RE SE
Subjt:  YDGSPTRSRSRSRSRSRSRSR--SRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREESE

XP_022958290.1 serine/arginine-rich splicing factor SR34A-like [Cucurbita moschata]3.1e-12090.84Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY----G
        MSSRFSRTIYVGNLPSDI+E EIEDLFYKYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIR RDGYNFDGCRLRVELAHGGRGPSSSD RS+Y    G
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY----G

Query:  GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSRS
        GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVS DSEGTFG VDYTNYDDMKYAIRKLDDTEF+NPWARAYIRVKKY+GSPTR RSR+
Subjt:  GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSRS

Query:  RSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREES
        RSRSRSRSRSRSR+ RRNRSKSAE +SVSRSVSRSRS SPVKSSR RSKSRSGSPR+ARE S
Subjt:  RSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREES

XP_022996414.1 serine/arginine-rich splicing factor SR34A-like [Cucurbita maxima]3.4e-11989.55Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY----G
        MSSRFSRTIYVGNLPSDI+E EIEDLFYKYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIR RDGYNFDGCRLRVELAHGGRGPSSSD RS+Y    G
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY----G

Query:  GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPT------
        GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVS DSEGTFG VDYTNYDDMKYAIRKLDDTEF+NPWARAYIRVKKY+GSPT      
Subjt:  GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPT------

Query:  RSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREES
        RSRSRSRSRSRSRSRSRSR+A+RNRSKSAE +SVSRSVSRSRS SPVKSSR RSKSRSGSPR+ARE S
Subjt:  RSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREES

XP_038907230.1 serine/arginine-rich splicing factor SR34A [Benincasa hispida]4.9e-12690.39Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYG----
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYG    
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYG----

Query:  ------GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPT
              GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYA+RKLDDTEFRNPWARAYIRVKKYDGSPT
Subjt:  ------GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPT

Query:  RSRSRSRSRSRSRSRSRSRT------------ARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREESE
        RSRSRSRSRSRSRSRSRSR+            ARRNRSKSAE RSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQARE SE
Subjt:  RSRSRSRSRSRSRSRSRSRT------------ARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREESE

TrEMBL top hitse value%identityAlignment
A0A0A0KLR9 Uncharacterized protein5.1e-12991.13Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----

Query:  --------------GGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
                      GGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
Subjt:  --------------GGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR

Query:  VKKYDGSPT----RSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREESE
        VKKYDGSPT    RSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSP+KSSRPRSKSRSGSPRQARE SE
Subjt:  VKKYDGSPT----RSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREESE

A0A6J1C7M8 serine/arginine-rich splicing factor SR34A1.5e-12590.61Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----

Query:  -----------GGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKK
                   GGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD+EGTFGIVDYTNYDDMKYAIRKLDDTEF+NPWARAYIRVKK
Subjt:  -----------GGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKK

Query:  YDGSPTRSRSRSRSRSRSRSR--SRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREESE
        YDGSPTRSRSRSRSRSRSRSR  SRSR+ARRNRSKS E RSVSRSVSRSRSPSPVKSSRPRSKSRSGSPR+ RE SE
Subjt:  YDGSPTRSRSRSRSRSRSRSR--SRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREESE

A0A6J1H330 serine/arginine-rich splicing factor SR34A-like1.5e-12090.84Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY----G
        MSSRFSRTIYVGNLPSDI+E EIEDLFYKYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIR RDGYNFDGCRLRVELAHGGRGPSSSD RS+Y    G
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY----G

Query:  GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSRS
        GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVS DSEGTFG VDYTNYDDMKYAIRKLDDTEF+NPWARAYIRVKKY+GSPTR RSR+
Subjt:  GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSRS

Query:  RSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREES
        RSRSRSRSRSRSR+ RRNRSKSAE +SVSRSVSRSRS SPVKSSR RSKSRSGSPR+ARE S
Subjt:  RSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREES

A0A6J1IHC8 serine/arginine-rich splicing factor SR34A-like isoform X42.7e-11482.86Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----
        MSSRFSRTIYVGNLPSDIKEYEIEDLF+KYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----

Query:  ---GGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRS
           GGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFG+VDYTNYDDMKYAIRKLDDTEFRNPWAR YIRVKKYDGSPTRS
Subjt:  ---GGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRS

Query:  RSRSR---------------------------------SRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKS
        RSRSR                                 SRSRSRSRSRSR+AR NRSKSAE RSVSRSVSRSRSPSPVKS
Subjt:  RSRSR---------------------------------SRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKS

A0A6J1K1U7 serine/arginine-rich splicing factor SR34A-like1.7e-11989.55Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY----G
        MSSRFSRTIYVGNLPSDI+E EIEDLFYKYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIR RDGYNFDGCRLRVELAHGGRGPSSSD RS+Y    G
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY----G

Query:  GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPT------
        GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVS DSEGTFG VDYTNYDDMKYAIRKLDDTEF+NPWARAYIRVKKY+GSPT      
Subjt:  GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPT------

Query:  RSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREES
        RSRSRSRSRSRSRSRSRSR+A+RNRSKSAE +SVSRSVSRSRS SPVKSSR RSKSRSGSPR+ARE S
Subjt:  RSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREES

SwissProt top hitse value%identityAlignment
A2RVS6 Serine/arginine-rich splicing factor SR34A3.0e-10271.43Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGG-
        MS RFSR+IYVGNLP DI+E+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE  RDAEDAI+ RDGYN DGCRLRVELAHGGRG SSSDRR  YGGGG 
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGG-

Query:  ------------RFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG
                    RFGVS+ SE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEFRNPWAR +IRVKKY+ 
Subjt:  ------------RFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG

Query:  SPTRSRSRSRSRSRSRSRSRSRTARRNRSKS---------------AERRSVSRSVSRSRSPSP-VKSSRPRSKSRSGSPRQAREES
        S +RSRS SRSRSRSRSRSRSR   R+ S+S               + RRS+SRS+S+SRSPSP  K S PR+ SRS S  ++R  S
Subjt:  SPTRSRSRSRSRSRSRSRSRSRTARRNRSKS---------------AERRSVSRSVSRSRSPSP-VKSSRPRSKSRSGSPRQAREES

F4JHI7 Serine/arginine-rich splicing factor SR34B5.4e-7562.73Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----
        MSSR SRTIYVGNLP DI+E E+EDLF KYG ++ I+LKIPPRPP Y FVEFE  RDA+DAI  RDGY+FDG  LRVELAHGGR  SS D R SY     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----

Query:  -------GGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG-
               GGG   G S+RSEYRV+V GLPSSASWQDLKDHMRK G+VCF++V RD  GT GIVDYT+Y+DMKYA   LDDTEFRN ++  Y+RV++YD  
Subjt:  -------GGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG-

Query:  ----SPTRSR--SRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPR
            SP+R R  S+SRSR RS SRSRSR+  R++S+S + +S+ RS ++S S SP   SR RSKSRS SPR
Subjt:  ----SPTRSR--SRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPR

O22315 Serine/arginine-rich-splicing factor SR344.7e-7961.96Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGR
        MSSR SRT+YVGNLP DI+E E+EDLF KYG ++ I+LK+PPRPP Y FVEF+  RDAEDAI  RDGY+FDG RLRVELAHGGR  SS D R S+ GGGR
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGR

Query:  -----------FGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG--
                    G S+RSE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT G+VDYT Y+DMKYA++KLDDTEFRN ++  Y+RV++YD   
Subjt:  -----------FGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG--

Query:  ---SPTRSRSRSRSRSRSRSR--SRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREES
           SP+R RS S+SRSRSR R  SRSR+  R+RS+S + +S  RS ++S S SP     PRSKSRS SPR++R  S
Subjt:  ---SPTRSRSRSRSRSRSRSR--SRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREES

Q6NYA0 Serine/arginine-rich splicing factor 1B5.8e-5358.47Show/hide
Query:  IYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGG-----GRFG-
        IYVGNLP DI+  ++ED+FYKYG I DI+LK     P + FVEFE  RDAEDA+  RDGY++DG RLRVE    GRG     R    GGG     GR+G 
Subjt:  IYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGG-----GRFG-

Query:  VSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFR-NPWARAYIRVKKYDG--SPT--RSRSRSR
         S+RSEYRVIV GLP S SWQDLKDHMR+AGDVC+A+V RD  GT G+V++   +DM YA+RKLD+T+FR +    AYIRV K DG  SP+  RSRSRSR
Subjt:  VSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFR-NPWARAYIRVKKYDG--SPT--RSRSRSR

Query:  SRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRS
        SRSRSRS SRSR+    RS+ + R S   S SRSR+
Subjt:  SRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRS

Q9XFR5 Serine/arginine-rich splicing factor SR302.8e-7162.84Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGR
        MSSR++RTIYVGNLP DI++ E+EDLFYKYG I+DI+LKIPPRPP Y FVEFE  RDA+DAI  RDGY+FDGCRLRVE+AHGGR  S S  R S      
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGR

Query:  FGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG-----SPTRSRS-
           S+RS+YRV+V GLP SASWQDLKDHMRKAGDVCF+EV  D +G  G+VDY+NYDDMKYAIRKLD TEFRN ++ AYIRV++Y+      SP  S+S 
Subjt:  FGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG-----SPTRSRS-

Query:  RSRSRSRSRS---RSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKS-SRPRSKSRSGSP
        RSRSRSR  S    S+SR+    RS S   R +SRS S   S S  +S S+ RS+SRS SP
Subjt:  RSRSRSRSRS---RSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKS-SRPRSKSRSGSP

Arabidopsis top hitse value%identityAlignment
AT1G02840.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.3e-8061.96Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGR
        MSSR SRT+YVGNLP DI+E E+EDLF KYG ++ I+LK+PPRPP Y FVEF+  RDAEDAI  RDGY+FDG RLRVELAHGGR  SS D R S+ GGGR
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGR

Query:  -----------FGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG--
                    G S+RSE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT G+VDYT Y+DMKYA++KLDDTEFRN ++  Y+RV++YD   
Subjt:  -----------FGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG--

Query:  ---SPTRSRSRSRSRSRSRSR--SRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREES
           SP+R RS S+SRSRSR R  SRSR+  R+RS+S + +S  RS ++S S SP     PRSKSRS SPR++R  S
Subjt:  ---SPTRSRSRSRSRSRSRSR--SRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREES

AT1G02840.3 RNA-binding (RRM/RBD/RNP motifs) family protein3.3e-8061.96Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGR
        MSSR SRT+YVGNLP DI+E E+EDLF KYG ++ I+LK+PPRPP Y FVEF+  RDAEDAI  RDGY+FDG RLRVELAHGGR  SS D R S+ GGGR
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGR

Query:  -----------FGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG--
                    G S+RSE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT G+VDYT Y+DMKYA++KLDDTEFRN ++  Y+RV++YD   
Subjt:  -----------FGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG--

Query:  ---SPTRSRSRSRSRSRSRSR--SRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREES
           SP+R RS S+SRSRSR R  SRSR+  R+RS+S + +S  RS ++S S SP     PRSKSRS SPR++R  S
Subjt:  ---SPTRSRSRSRSRSRSRSR--SRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREES

AT3G49430.1 SER/ARG-rich protein 34A2.1e-10371.43Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGG-
        MS RFSR+IYVGNLP DI+E+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE  RDAEDAI+ RDGYN DGCRLRVELAHGGRG SSSDRR  YGGGG 
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGG-

Query:  ------------RFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG
                    RFGVS+ SE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEFRNPWAR +IRVKKY+ 
Subjt:  ------------RFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG

Query:  SPTRSRSRSRSRSRSRSRSRSRTARRNRSKS---------------AERRSVSRSVSRSRSPSP-VKSSRPRSKSRSGSPRQAREES
        S +RSRS SRSRSRSRSRSRSR   R+ S+S               + RRS+SRS+S+SRSPSP  K S PR+ SRS S  ++R  S
Subjt:  SPTRSRSRSRSRSRSRSRSRSRTARRNRSKS---------------AERRSVSRSVSRSRSPSP-VKSSRPRSKSRSGSPRQAREES

AT3G49430.2 SER/ARG-rich protein 34A6.3e-10372.96Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGG-
        MS RFSR+IYVGNLP DI+E+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE  RDAEDAI+ RDGYN DGCRLRVELAHGGRG SSSDRR  YGGGG 
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGG-

Query:  ------------RFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG
                    RFGVS+ SE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEFRNPWAR +IRVKKY+ 
Subjt:  ------------RFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG

Query:  SPTRSRSRSRSRSRSRSRSRSRTARRNRSKS---------------AERRSVSRSVSRSRSPSPVKSSRP
        S +RSRS SRSRSRSRSRSRSR   R+ S+S               + RRS+SRS+S+SRSPSP K   P
Subjt:  SPTRSRSRSRSRSRSRSRSRSRTARRNRSKS---------------AERRSVSRSVSRSRSPSPVKSSRP

AT3G49430.3 SER/ARG-rich protein 34A2.1e-10371.43Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGG-
        MS RFSR+IYVGNLP DI+E+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE  RDAEDAI+ RDGYN DGCRLRVELAHGGRG SSSDRR  YGGGG 
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGG-

Query:  ------------RFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG
                    RFGVS+ SE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEFRNPWAR +IRVKKY+ 
Subjt:  ------------RFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG

Query:  SPTRSRSRSRSRSRSRSRSRSRTARRNRSKS---------------AERRSVSRSVSRSRSPSP-VKSSRPRSKSRSGSPRQAREES
        S +RSRS SRSRSRSRSRSRSR   R+ S+S               + RRS+SRS+S+SRSPSP  K S PR+ SRS S  ++R  S
Subjt:  SPTRSRSRSRSRSRSRSRSRSRTARRNRSKS---------------AERRSVSRSVSRSRSPSP-VKSSRPRSKSRSGSPRQAREES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGTCGTTTTTCTCGCACAATATATGTTGGAAACTTGCCTTCAGACATAAAAGAGTATGAAATTGAAGATTTGTTCTACAAGTATGGCCGAATTTTGGATATTGA
ATTGAAGATTCCACCACGCCCTCCATGTTATTGTTTTGTGGAGTTTGAGAGTGTTAGGGATGCAGAAGATGCAATCAGAGCTCGTGATGGATATAACTTTGATGGTTGTC
GTCTAAGGGTTGAGCTTGCACATGGTGGTAGAGGCCCTTCATCTAGTGATCGTCGTAGTAGTTATGGTGGTGGTGGACGTTTTGGTGTTTCAAAACGATCAGAATATCGA
GTTATTGTACGTGGTCTTCCGTCTTCTGCTTCTTGGCAGGATTTGAAGGATCATATGCGTAAGGCGGGGGATGTGTGTTTTGCTGAAGTTTCACGTGATAGCGAAGGGAC
GTTTGGGATCGTTGATTATACTAACTACGATGACATGAAATATGCTATACGAAAACTTGATGATACTGAATTCAGAAATCCTTGGGCGAGAGCATACATTCGGGTGAAGA
AGTATGATGGAAGTCCCACTAGGAGCAGGAGCAGGAGCCGGAGCCGGAGCCGGAGCAGAAGCCGTAGCCGAAGCCGGACTGCTAGACGAAATAGGAGCAAATCAGCAGAA
CGACGATCTGTCTCTAGATCAGTTTCAAGATCGAGATCTCCATCTCCTGTTAAATCTTCAAGGCCACGGTCAAAATCAAGATCTGGATCACCACGTCAGGCACGAGAAGA
AAGCGAGTGA
mRNA sequenceShow/hide mRNA sequence
GTCCCTTTACCTTATTCCCGCGTCTGTGGCTGTGGTATATTATCTTCTGTTGCGACCTAACCCTAAGCCCTTCGTCATCACGTCCGGTCGCTGCGAAGAAAGCCGAGAAG
GATCCCCAGGTCATCAACTCTTCTTTCAGCCCTTGCCGAGCCGCAGAGCCGTCACTGTCGCTTTTCACTTTCTCGGTGCAGTTTACTTCGTCAGTTTCTCACTCTTTGGA
ATAATATTCAAACTTCCTTGGAGTAATTTGTTGCCTTGAAGATGAGTAGTCGTTTTTCTCGCACAATATATGTTGGAAACTTGCCTTCAGACATAAAAGAGTATGAAATT
GAAGATTTGTTCTACAAGTATGGCCGAATTTTGGATATTGAATTGAAGATTCCACCACGCCCTCCATGTTATTGTTTTGTGGAGTTTGAGAGTGTTAGGGATGCAGAAGA
TGCAATCAGAGCTCGTGATGGATATAACTTTGATGGTTGTCGTCTAAGGGTTGAGCTTGCACATGGTGGTAGAGGCCCTTCATCTAGTGATCGTCGTAGTAGTTATGGTG
GTGGTGGACGTTTTGGTGTTTCAAAACGATCAGAATATCGAGTTATTGTACGTGGTCTTCCGTCTTCTGCTTCTTGGCAGGATTTGAAGGATCATATGCGTAAGGCGGGG
GATGTGTGTTTTGCTGAAGTTTCACGTGATAGCGAAGGGACGTTTGGGATCGTTGATTATACTAACTACGATGACATGAAATATGCTATACGAAAACTTGATGATACTGA
ATTCAGAAATCCTTGGGCGAGAGCATACATTCGGGTGAAGAAGTATGATGGAAGTCCCACTAGGAGCAGGAGCAGGAGCCGGAGCCGGAGCCGGAGCAGAAGCCGTAGCC
GAAGCCGGACTGCTAGACGAAATAGGAGCAAATCAGCAGAACGACGATCTGTCTCTAGATCAGTTTCAAGATCGAGATCTCCATCTCCTGTTAAATCTTCAAGGCCACGG
TCAAAATCAAGATCTGGATCACCACGTCAGGCACGAGAAGAAAGCGAGTGATGCAAAGCTATTATTATATGCGTGGTTGTTATAATATTCAGGATGTGACATTGCCTTGG
AATTCATTTTAGTTTAGGACCTATGCAGTGCAGACTGGTTATATGAGGGGTTGAGTTAGATGGAAAATGGCATGAGTTGTATGGATTTTCTTTTGAATGCTTCCTACACT
TTGTTTGGAGACATTTTTAGGTATCTGCATTCTCAAGATACTTGCAGACTGGTTTCCCTGCTGATAACTACTCAGATTTTGTTTGAAAGTTGAAAATGAAATTGTTATTA
AATGGGATTTTAGACCTTGTAATTATAAATTTTAGACCTTGGATATTCTTCTCTTTTTGTTTCTTTTCTTCTTCCCTTCTGTTGTCAGCATGAGGGACACAGGTTGAAGA
GACCCATGAGGAATGAACGATGTACTCCCAATGTGAACATGCACGTTGATCCGAACTTGCAGCGGGAGGAACCCACTTTCCGACCTTAGGTGAGATGCACCAAAGAAAAG
CGAACAACTAAGAAAATGAAAGAAAAACGAACAAATATAGAAGAGGAAGAAGACAAGGAAAGGACAACAAAAGTTGATAGTGAGGAGCGGTGAGCGGCTGTTGGAGGGAT
TTGGAGCTTAGATGATGGAGTTGTGGGGGGAGCAGGGAAGAGGAAGAAGACGGAGTAAGCATAAAAAATGTTGCAGGGTTTAAAATGCCACTAAGACTGCTTTTAACGAC
GCTCGTAACATAATTTAGCAAGGTGGGCCCACCTAGGGGTTGTTTACATAAATCTCTAATGTGGATTAAAATTGAGTTCAGTCAATTTTCTTTTATCACGTACAATCATG
TGATATCATCGGGTCAATTAGAAGATTAATGTAGTTTTAAAAAGAATTTAGGTAAGAATGGTACTTTTAAGATGTGTAATATAAAATTAAATAATATAGGTCAATAGGG
Protein sequenceShow/hide protein sequence
MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGRFGVSKRSEYR
VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSRSRSRSRSRSRSRSRTARRNRSKSAE
RRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPRQAREESE