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Pay0015307 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0015307
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionSquamosa promoter-binding-like protein
Genome locationchr12:22675246..22677501
RNA-Seq ExpressionPay0015307
SyntenyPay0015307
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009908 - flower development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004333 - SBP domain
IPR036893 - SBP domain superfamily
IPR044817 - Squamosa promoter-binding-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057003.1 squamosa promoter-binding-like protein 3 [Cucumis melo var. makuwa]1.4e-6099.22Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEED-EEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR
        MATGKADGKRRLNYYEMEEEDEED EEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR
Subjt:  MATGKADGKRRLNYYEMEEEDEED-EEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR

Query:  RHKVCEFHAKAPAVAVAGIDQRFCQQCSR
        RHKVCEFHAKAPAVAVAGIDQRFCQQCSR
Subjt:  RHKVCEFHAKAPAVAVAGIDQRFCQQCSR

XP_008442764.1 PREDICTED: squamosa promoter-binding-like protein 3 [Cucumis melo]1.4e-6099.22Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEED-EEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR
        MATGKADGKRRLNYYEMEEEDEED EEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR
Subjt:  MATGKADGKRRLNYYEMEEEDEED-EEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR

Query:  RHKVCEFHAKAPAVAVAGIDQRFCQQCSR
        RHKVCEFHAKAPAVAVAGIDQRFCQQCSR
Subjt:  RHKVCEFHAKAPAVAVAGIDQRFCQQCSR

XP_011653273.1 squamosa promoter-binding-like protein 3 [Cucumis sativus]4.5e-4885.16Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRR
        MATGKADGKRRL+YYEMEEEDEED   EEEDEDEEQEID   LGFSGDFNKKKK+ TSGGSSNKKS S FG  P AA PPPCQADNCNADLS SKRYHRR
Subjt:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRR

Query:  HKVCEFHAKAPAVAVAGIDQRFCQQCSR
        HKVCEFHAKAP V V GIDQRFCQQCSR
Subjt:  HKVCEFHAKAPAVAVAGIDQRFCQQCSR

XP_038894994.1 squamosa promoter-binding-like protein 3 isoform X1 [Benincasa hispida]3.8e-4784.38Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRR
        MATGKADGKRRLNYYEMEEE+EEDEEEEEE+ED E++   G LGF+GDFNKKKK+LTSG SSNKKSGSG+G    AAA P CQADNCNADLSGSKRYHRR
Subjt:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRR

Query:  HKVCEFHAKAPAVAVAGIDQRFCQQCSR
        HKVCEFHAKAPAVAVAGI QRFCQQCSR
Subjt:  HKVCEFHAKAPAVAVAGIDQRFCQQCSR

XP_038894995.1 squamosa promoter-binding protein 2-like isoform X2 [Benincasa hispida]3.8e-4784.38Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRR
        MATGKADGKRRLNYYEMEEE+EEDEEEEEE+ED E++   G LGF+GDFNKKKK+LTSG SSNKKSGSG+G    AAA P CQADNCNADLSGSKRYHRR
Subjt:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRR

Query:  HKVCEFHAKAPAVAVAGIDQRFCQQCSR
        HKVCEFHAKAPAVAVAGI QRFCQQCSR
Subjt:  HKVCEFHAKAPAVAVAGIDQRFCQQCSR

TrEMBL top hitse value%identityAlignment
A0A0A0LSD9 Squamosa promoter-binding-like protein2.2e-4885.16Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRR
        MATGKADGKRRL+YYEMEEEDEED   EEEDEDEEQEID   LGFSGDFNKKKK+ TSGGSSNKKS S FG  P AA PPPCQADNCNADLS SKRYHRR
Subjt:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRR

Query:  HKVCEFHAKAPAVAVAGIDQRFCQQCSR
        HKVCEFHAKAP V V GIDQRFCQQCSR
Subjt:  HKVCEFHAKAPAVAVAGIDQRFCQQCSR

A0A1S3B6H6 squamosa promoter-binding-like protein 36.6e-6199.22Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEED-EEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR
        MATGKADGKRRLNYYEMEEEDEED EEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR
Subjt:  MATGKADGKRRLNYYEMEEEDEED-EEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR

Query:  RHKVCEFHAKAPAVAVAGIDQRFCQQCSR
        RHKVCEFHAKAPAVAVAGIDQRFCQQCSR
Subjt:  RHKVCEFHAKAPAVAVAGIDQRFCQQCSR

A0A5D3DT58 Squamosa promoter-binding-like protein 36.6e-6199.22Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEED-EEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR
        MATGKADGKRRLNYYEMEEEDEED EEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR
Subjt:  MATGKADGKRRLNYYEMEEEDEED-EEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR

Query:  RHKVCEFHAKAPAVAVAGIDQRFCQQCSR
        RHKVCEFHAKAPAVAVAGIDQRFCQQCSR
Subjt:  RHKVCEFHAKAPAVAVAGIDQRFCQQCSR

A0A6J1EH14 Squamosa promoter-binding-like protein5.4e-3974.22Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRR
        MATGKADGKRRLNYY+M        EEEEE+E+EE E+  G LGF GDFNKKKK L SGG SNKKSGSG+G    A A P CQADNCNADLS SKRYH R
Subjt:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRR

Query:  HKVCEFHAKAPAVAVAGIDQRFCQQCSR
        HKVCEFHAKA AV VAGI QRFCQQCSR
Subjt:  HKVCEFHAKAPAVAVAGIDQRFCQQCSR

A0A6J1GT00 Squamosa promoter-binding-like protein1.4e-3972.52Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAA---PPPCQADNCNADLSGSKRY
        M TGKADGKRRLNYY++EEED+E+EEE +E+ED +     G LGF  DFNKKKK++  GGSSNK SGSG+G     AA    P CQADNCNADLSGSKRY
Subjt:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAA---PPPCQADNCNADLSGSKRY

Query:  HRRHKVCEFHAKAPAVAVAGIDQRFCQQCSR
        HRRHKVCEFHAKAPAV VAGI QRFCQQCSR
Subjt:  HRRHKVCEFHAKAPAVAVAGIDQRFCQQCSR

SwissProt top hitse value%identityAlignment
A2YFT9 Squamosa promoter-binding-like protein 105.6e-1766.67Show/hide
Query:  GFGTGPPAAAPPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGIDQRFCQQCSR
        G G G     PP CQA+ C ADLSG+K YHRRHKVCE+HAKA  VA +G  QRFCQQCSR
Subjt:  GFGTGPPAAAPPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGIDQRFCQQCSR

A3C057 Squamosa promoter-binding-like protein 174.8e-1655.56Show/hide
Query:  TSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGIDQRFCQQCSR
        +SGG   K  G      PP   PP CQ + C  DLSG K Y+ RHKVC  HAK P V VAG++QRFCQQCSR
Subjt:  TSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGIDQRFCQQCSR

P93015 Squamosa promoter-binding-like protein 31.1e-1544.53Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRR
        M   KA+GKR L   E+ EE+EE+EE E+ED  EE+E             KK+K     G +   SG              CQ ++C AD+S +K+YH+R
Subjt:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRR

Query:  HKVCEFHAKAPAVAVAGIDQRFCQQCSR
        HKVC+FHAKAP V ++G+ QRFCQQCSR
Subjt:  HKVCEFHAKAPAVAVAGIDQRFCQQCSR

Q0DAE8 Squamosa promoter-binding-like protein 105.6e-1766.67Show/hide
Query:  GFGTGPPAAAPPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGIDQRFCQQCSR
        G G G     PP CQA+ C ADLSG+K YHRRHKVCE+HAKA  VA +G  QRFCQQCSR
Subjt:  GFGTGPPAAAPPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGIDQRFCQQCSR

Q0E3F8 Squamosa promoter-binding-like protein 51.4e-1559.21Show/hide
Query:  GSSNKKSGSGFGT---GPPAAA----PPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGIDQRFCQQCSR
        G    + G G G    G  AAA    PP CQA+ C ADLS +K YHRRHKVC+FHAKA AV  AG  QRFCQQCSR
Subjt:  GSSNKKSGSGFGT---GPPAAA----PPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGIDQRFCQQCSR

Arabidopsis top hitse value%identityAlignment
AT1G02065.1 squamosa promoter binding protein-like 83.4e-1773.47Show/hide
Query:  PPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGIDQRFCQQCSR
        P CQA+ CNADLS +K YHRRHKVCEFH+KA  V  AG+ QRFCQQCSR
Subjt:  PPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGIDQRFCQQCSR

AT1G02065.2 squamosa promoter binding protein-like 83.4e-1773.47Show/hide
Query:  PPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGIDQRFCQQCSR
        P CQA+ CNADLS +K YHRRHKVCEFH+KA  V  AG+ QRFCQQCSR
Subjt:  PPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGIDQRFCQQCSR

AT1G53160.2 squamosa promoter binding protein-like 44.7e-1139.34Show/hide
Query:  DGKRRLNYYEMEEEDEEDEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRRHKVCEF
        +GKR      M+++    EE+ E D DEE+E+             + +V  S GS N+                 CQ D C AD+  +K YHRRHKVCE 
Subjt:  DGKRRLNYYEMEEEDEEDEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRRHKVCEF

Query:  HAKAPAVAVAGIDQRFCQQCSR
        HAKA +V ++G++QRFCQQCSR
Subjt:  HAKAPAVAVAGIDQRFCQQCSR

AT2G33810.1 squamosa promoter binding protein-like 37.5e-1744.53Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRR
        M   KA+GKR L   E+ EE+EE+EE E+ED  EE+E             KK+K     G +   SG              CQ ++C AD+S +K+YH+R
Subjt:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRR

Query:  HKVCEFHAKAPAVAVAGIDQRFCQQCSR
        HKVC+FHAKAP V ++G+ QRFCQQCSR
Subjt:  HKVCEFHAKAPAVAVAGIDQRFCQQCSR

AT3G15270.1 squamosa promoter binding protein-like 51.6e-1145.28Show/hide
Query:  EEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPP--CQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGIDQRF
        EEE E   D E+E DG      GD +K+KKV+                GP     P   CQ D C  +L+ +K+Y+RRH+VCE HAKA A  VAG+ QRF
Subjt:  EEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPP--CQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGIDQRF

Query:  CQQCSR
        CQQCSR
Subjt:  CQQCSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGGAAAAGCTGATGGAAAAAGGAGGCTAAATTATTACGAAATGGAGGAAGAAGATGAAGAAGATGAAGAAGAAGAAGAAGAAGATGAAGATGAGGAACAAGA
AATCGATGGAGGAGGATTAGGGTTTTCAGGGGATTTTAATAAGAAAAAGAAAGTTTTGACTTCTGGGGGTTCTTCTAATAAAAAATCGGGATCTGGGTTCGGTACTGGAC
CTCCTGCGGCCGCGCCACCGCCGTGTCAGGCCGATAATTGCAATGCCGATCTGTCTGGTTCTAAGCGGTACCATCGCCGTCATAAGGTCTGTGAGTTTCATGCTAAAGCT
CCGGCGGTTGCTGTGGCCGGAATCGACCAACGGTTCTGTCAACAATGTAGCAGGTAA
mRNA sequenceShow/hide mRNA sequence
CTACTACTACTACAAATGTCCTCTGCAAGAAACCAATTTCTTGTTTCTTCTTTCTTCTTCTTAATTACTCTCTCACTATAATCCCTCTGTATCTCTGCTTCAGCTTTTTT
TGTAATGGCGACTGGAAAAGCTGATGGAAAAAGGAGGCTAAATTATTACGAAATGGAGGAAGAAGATGAAGAAGATGAAGAAGAAGAAGAAGAAGATGAAGATGAGGAAC
AAGAAATCGATGGAGGAGGATTAGGGTTTTCAGGGGATTTTAATAAGAAAAAGAAAGTTTTGACTTCTGGGGGTTCTTCTAATAAAAAATCGGGATCTGGGTTCGGTACT
GGACCTCCTGCGGCCGCGCCACCGCCGTGTCAGGCCGATAATTGCAATGCCGATCTGTCTGGTTCTAAGCGGTACCATCGCCGTCATAAGGTCTGTGAGTTTCATGCTAA
AGCTCCGGCGGTTGCTGTGGCCGGAATCGACCAACGGTTCTGTCAACAATGTAGCAGGTAATTGAGGAAATCTAAAAAGACAGAGGGGTCGACAAGTTGGCAATTTGCCC
ATATACACTAAATCAGCAATGGCATTTAGTGAAGAATTCAAGGAAGCCATACAATATTGATTGATG
Protein sequenceShow/hide protein sequence
MATGKADGKRRLNYYEMEEEDEEDEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRRHKVCEFHAKA
PAVAVAGIDQRFCQQCSR