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Pay0015375 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0015375
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionDNA repair protein recA-like protein 1
Genome locationchr01:28755618..28757475
RNA-Seq ExpressionPay0015375
SyntenyPay0015375
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK08176.1 DNA repair protein recA-like protein 1 [Cucumis melo var. makuwa]1.0e-2669.7Show/hide
Query:  WYRVDGKGHLGQVYDEEVYEKFPFIEVNYSKYLVKYHSTMSSRHIQFLIGTLDIF-------------------RLGHGRDKALQYLKDNLALQDEIEK
        WY   G+ +  +VYDEEVYEKFPFIEVNYSKYL+KYHSTMSSRHIQFLIGTLD+F                   RLGHGRDKALQYLKDNLALQDEIEK
Subjt:  WYRVDGKGHLGQVYDEEVYEKFPFIEVNYSKYLVKYHSTMSSRHIQFLIGTLDIF-------------------RLGHGRDKALQYLKDNLALQDEIEK
TYK29028.1 DNA repair protein recA-like protein 1 [Cucumis melo var. makuwa]1.4e-1234.11Show/hide
Query:  MCGQSRRTNGISGLHQRNADDVVANKLPGKEELRRL-VYW---------------YRVDGKGHLGQVYDEEVYEKFPFIEVNYSKY--------------
        MCGQSRRTNGISGL      + V NK    +  RR    W                RVDGKGHLGQVY+EEVYE FPFIE N SK+              
Subjt:  MCGQSRRTNGISGLHQRNADDVVANKLPGKEELRRL-VYW---------------YRVDGKGHLGQVYDEEVYEKFPFIEVNYSKY--------------

Query:  ---LVKY------------------HSTMSSRHIQ------------------------------------------FLIGTLDI---FRLGHGRDKALQ
           L+ Y                  H+ M   ++                                             +G  +    +RLG GRDKALQ
Subjt:  ---LVKY------------------HSTMSSRHIQ------------------------------------------FLIGTLDI---FRLGHGRDKALQ

Query:  YLKDNLALQDEIEK
        YLKDN ALQDEIEK
Subjt:  YLKDNLALQDEIEK
TrEMBL top hitse value%identityAlignment
A0A5D3CCT7 DNA repair protein recA-like protein 14.8e-2769.7Show/hide
Query:  WYRVDGKGHLGQVYDEEVYEKFPFIEVNYSKYLVKYHSTMSSRHIQFLIGTLDIF-------------------RLGHGRDKALQYLKDNLALQDEIEK
        WY   G+ +  +VYDEEVYEKFPFIEVNYSKYL+KYHSTMSSRHIQFLIGTLD+F                   RLGHGRDKALQYLKDNLALQDEIEK
Subjt:  WYRVDGKGHLGQVYDEEVYEKFPFIEVNYSKYLVKYHSTMSSRHIQFLIGTLDIF-------------------RLGHGRDKALQYLKDNLALQDEIEK
A0A5D3DZZ5 DNA repair protein recA-like protein 16.8e-1334.11Show/hide
Query:  MCGQSRRTNGISGLHQRNADDVVANKLPGKEELRRL-VYW---------------YRVDGKGHLGQVYDEEVYEKFPFIEVNYSKY--------------
        MCGQSRRTNGISGL      + V NK    +  RR    W                RVDGKGHLGQVY+EEVYE FPFIE N SK+              
Subjt:  MCGQSRRTNGISGLHQRNADDVVANKLPGKEELRRL-VYW---------------YRVDGKGHLGQVYDEEVYEKFPFIEVNYSKY--------------

Query:  ---LVKY------------------HSTMSSRHIQ------------------------------------------FLIGTLDI---FRLGHGRDKALQ
           L+ Y                  H+ M   ++                                             +G  +    +RLG GRDKALQ
Subjt:  ---LVKY------------------HSTMSSRHIQ------------------------------------------FLIGTLDI---FRLGHGRDKALQ

Query:  YLKDNLALQDEIEK
        YLKDN ALQDEIEK
Subjt:  YLKDNLALQDEIEK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G79050.1 recA DNA recombination family protein2.6e-0476Show/hide
Query:  RLGHGRDKALQYLKDNLALQDEIEK
        RLG GR+KALQ+L++N ALQDEIEK
Subjt:  RLGHGRDKALQYLKDNLALQDEIEK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGGTCAGAGCAGACGAACAAACGGGATTAGTGGTTTACATCAGAGAAATGCAGACGATGTTGTCGCCAACAAGCTCCCTGGCAAAGAAGAGCTTCGGCGACTGGT
ATACTGGTACAGGGTTGACGGCAAGGGACATCTAGGACAAGTTTATGACGAGGAAGTTTATGAGAAGTTTCCATTCATTGAAGTCAACTATTCCAAATACTTGGTCAAAT
ATCACTCTACAATGTCTTCAAGGCATATTCAGTTTTTGATAGGAACGTTGGATATATTCAGGTTGGGACATGGAAGAGACAAAGCTCTACAGTACTTAAAAGATAATCTT
GCTCTTCAAGATGAAATCGAGAAGGTTCATTTTTGTGATTGGACATACTATCTAAACTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTGGTCAGAGCAGACGAACAAACGGGATTAGTGGTTTACATCAGAGAAATGCAGACGATGTTGTCGCCAACAAGCTCCCTGGCAAAGAAGAGCTTCGGCGACTGGT
ATACTGGTACAGGGTTGACGGCAAGGGACATCTAGGACAAGTTTATGACGAGGAAGTTTATGAGAAGTTTCCATTCATTGAAGTCAACTATTCCAAATACTTGGTCAAAT
ATCACTCTACAATGTCTTCAAGGCATATTCAGTTTTTGATAGGAACGTTGGATATATTCAGGTTGGGACATGGAAGAGACAAAGCTCTACAGTACTTAAAAGATAATCTT
GCTCTTCAAGATGAAATCGAGAAGGTTCATTTTTGTGATTGGACATACTATCTAAACTCATAG
Protein sequenceShow/hide protein sequence
MCGQSRRTNGISGLHQRNADDVVANKLPGKEELRRLVYWYRVDGKGHLGQVYDEEVYEKFPFIEVNYSKYLVKYHSTMSSRHIQFLIGTLDIFRLGHGRDKALQYLKDNL
ALQDEIEKVHFCDWTYYLNS