; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0015414 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0015414
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr06:21786354..21787303
RNA-Seq ExpressionPay0015414
SyntenyPay0015414
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059849.1 uncharacterized protein E6C27_scaffold108G001320 [Cucumis melo var. makuwa]2.8e-10070.89Show/hide
Query:  MNLIAKTRLSKTISDMGPFYPQLIREFVVNLPTDFNDPNSPDYQTVHIRGFKFSITPAVINGFLGN------AVSLTLLH------HPWTLSSWPVNGIL
        MNLIAK  LSKTISD+G FYPQLIREFVVNLPTDFNDP+SP+YQTVHIR FKF ITPAVINGFLGN      A+S+ L+           LSSW VNGI 
Subjt:  MNLIAKTRLSKTISDMGPFYPQLIREFVVNLPTDFNDPNSPDYQTVHIRGFKFSITPAVINGFLGN------AVSLTLLH------HPWTLSSWPVNGIL

Query:  AAALSV--------------------NVSATLGTFLYRICNDDRVDAGAFIYNQLLRHVGSFRVKLPIALPRFFSGLLLHLNAAILTTSDAPGPDPKTLS
        AAALSV                    +VSA LGTFLYRICNDD+VDAGAFIYNQLLRHVGSF VKLPIALPRFFSGLLLHLN AILT+SDAP PDPKTLS
Subjt:  AAALSV--------------------NVSATLGTFLYRICNDDRVDAGAFIYNQLLRHVGSFRVKLPIALPRFFSGLLLHLNAAILTTSDAPGPDPKTLS

Query:  LSYRLFQGSH-------------PRVFDTMDWDEATDGFFVNKELATRILNSLTVESRSLATTNSLMSKRRLKIDTLIRHLKTFAPSLSQGN
        LSYRLFQGSH             PRVFDT DWDEATDGFFV+KELA+RILNSLT +SRSLAT  SLMS+RRL+ID+LIRHLKTFA S S+ N
Subjt:  LSYRLFQGSH-------------PRVFDTMDWDEATDGFFVNKELATRILNSLTVESRSLATTNSLMSKRRLKIDTLIRHLKTFAPSLSQGN

KAA0066488.1 uncharacterized protein E6C27_scaffold25G00260 [Cucumis melo var. makuwa]5.2e-10270.89Show/hide
Query:  MNLIAKTRLSKTISDMGPFYPQLIREFVVNLPTDFNDPNSPDYQTVHIRGFKFSITPAVINGFLGNAVSLTL-LHHP-----------WTLSSWPVNGIL
        MN IAK  LSKTISD+GPF+PQLIREFVVNLPTDFNDP+ PDYQ VHI+GFKFSITPAVINGFLGNAVS+   L  P            TLSSWPVNGI 
Subjt:  MNLIAKTRLSKTISDMGPFYPQLIREFVVNLPTDFNDPNSPDYQTVHIRGFKFSITPAVINGFLGNAVSLTL-LHHP-----------WTLSSWPVNGIL

Query:  AAALSV--------------------NVSATLGTFLYRICNDDRVDAGAFIYNQLLRHVGSFRVKLPIALPRFFSGLLLHLNAAILTTSDAPGPDPKTLS
        AAALSV                    +VSA LG FLYRICNDDRVDAG FIYN+LLRHV SF VKLPIALPRFFSGLLLHLNAAILTTSDAP PDPKTLS
Subjt:  AAALSV--------------------NVSATLGTFLYRICNDDRVDAGAFIYNQLLRHVGSFRVKLPIALPRFFSGLLLHLNAAILTTSDAPGPDPKTLS

Query:  LSYRLFQGSH-------------PRVFDTMDWDEATDGFFVNKELATRILNSLTVESRSLATTNSLMSKRRLKIDTLIRHLKTFAPSLSQGN
        LSYRLFQG+H             P+VFDT +WDEATDGFFV+KELA+RILN+LT ESRSL T  SLMS+RRL+ID+LIRHLKT APSL+QGN
Subjt:  LSYRLFQGSH-------------PRVFDTMDWDEATDGFFVNKELATRILNSLTVESRSLATTNSLMSKRRLKIDTLIRHLKTFAPSLSQGN

XP_008456217.1 PREDICTED: uncharacterized protein LOC103496220 [Cucumis melo]3.7e-10073.36Show/hide
Query:  MNLIAKTRLSKTISDMGPFYPQLIREFVVNLPTDFNDPNSPDYQTVHIRGFKFSITPAVINGFLGNAVSLTLLH------------HPWTLSSWPVNGIL
        MNLI K  LSKTISD+GPFYPQLIREFVVNLPTDFNDP+SP+YQT+HIRGFK +I+P VINGFLGN VS+                   TLSSWPVNGI 
Subjt:  MNLIAKTRLSKTISDMGPFYPQLIREFVVNLPTDFNDPNSPDYQTVHIRGFKFSITPAVINGFLGNAVSLTLLH------------HPWTLSSWPVNGIL

Query:  AAALSVN--VSATLGTFLYRICNDDRVDAGAFIYNQLLRHVGSFRVKLPIALPRFFSGLLLHLNAAILTTSDAPGPDPKTLSLSYRLFQGSH--------
        AAALSV   +   +GTFLYRI NDDRVDAGAFIYNQLLRHVGSF VKLPIALPRF SGLLLHLNAAILTTSDAP PDPKTLSLSYRLFQGSH        
Subjt:  AAALSVN--VSATLGTFLYRICNDDRVDAGAFIYNQLLRHVGSFRVKLPIALPRFFSGLLLHLNAAILTTSDAPGPDPKTLSLSYRLFQGSH--------

Query:  -----PRVFDTMDWDEATDGFFVNKELATRILNSLTVESRSLATTNSLMSKRRLKIDTLIRHLKTFAPSLSQGN
             PRVFDT DWDEATDGFFV+KELA+RILNSLT ES SLAT  SL+S+ RL+ID LIRHLKTFAPS S+G+
Subjt:  -----PRVFDTMDWDEATDGFFVNKELATRILNSLTVESRSLATTNSLMSKRRLKIDTLIRHLKTFAPSLSQGN

XP_008460260.1 PREDICTED: uncharacterized protein LOC103499138 [Cucumis melo]8.0e-10375Show/hide
Query:  MNLIAKTRLSKTISDMGPFYPQLIREFVVNLPTDFNDPNSPDYQTVHIRGFKFSITPAVINGFLGNAVSLTLLHHP------------WTLSSWPVNGIL
        MNLIAK  LSKTISD+G FYPQLIREFVVNLP DFNDP+SPDYQ VHIRGFKFSITPAVINGFLGN VS+  +                TLSSWP NGI 
Subjt:  MNLIAKTRLSKTISDMGPFYPQLIREFVVNLPTDFNDPNSPDYQTVHIRGFKFSITPAVINGFLGNAVSLTLLHHP------------WTLSSWPVNGIL

Query:  AAALSVNVSATLGTFLYRICNDDRVDAGAFIYNQLLRHVGSFRVKLPIALPRFFSGLLLHLNAAILTTSDAPGPDPKTLSLSYRLFQGSH----------
        A ALSVNVSA LGTFLY ICNDDRVDA AFIYNQLLRHVGSF VKLPIALPRFFSGLLLHLNA ILTTSDAP PDPKTLSLSYRLFQG H          
Subjt:  AAALSVNVSATLGTFLYRICNDDRVDAGAFIYNQLLRHVGSFRVKLPIALPRFFSGLLLHLNAAILTTSDAPGPDPKTLSLSYRLFQGSH----------

Query:  ---PRVFDTMDWDEATDGFFVNKELATRILNSLTVESRSLATTNSLMSKRRLKIDTLIRHLKTFAPSLSQGN
            RV D  DWDEATDGFFV+KELA+RILNSLT ESRSLAT  SLMS+RRL++D+LI HLKTFA S S+GN
Subjt:  ---PRVFDTMDWDEATDGFFVNKELATRILNSLTVESRSLATTNSLMSKRRLKIDTLIRHLKTFAPSLSQGN

XP_008466770.1 PREDICTED: uncharacterized protein LOC103504101 [Cucumis melo]2.8e-10070.89Show/hide
Query:  MNLIAKTRLSKTISDMGPFYPQLIREFVVNLPTDFNDPNSPDYQTVHIRGFKFSITPAVINGFLGN------AVSLTLLH------HPWTLSSWPVNGIL
        MNLIAK  LSKTISD+G FYPQLIREFVVNLPTDFNDP+SP+YQTVHIR FKF ITPAVINGFLGN      A+S+ L+           LSSW VNGI 
Subjt:  MNLIAKTRLSKTISDMGPFYPQLIREFVVNLPTDFNDPNSPDYQTVHIRGFKFSITPAVINGFLGN------AVSLTLLH------HPWTLSSWPVNGIL

Query:  AAALSV--------------------NVSATLGTFLYRICNDDRVDAGAFIYNQLLRHVGSFRVKLPIALPRFFSGLLLHLNAAILTTSDAPGPDPKTLS
        AAALSV                    +VSA LGTFLYRICNDD+VDAGAFIYNQLLRHVGSF VKLPIALPRFFSGLLLHLN AILT+SDAP PDPKTLS
Subjt:  AAALSV--------------------NVSATLGTFLYRICNDDRVDAGAFIYNQLLRHVGSFRVKLPIALPRFFSGLLLHLNAAILTTSDAPGPDPKTLS

Query:  LSYRLFQGSH-------------PRVFDTMDWDEATDGFFVNKELATRILNSLTVESRSLATTNSLMSKRRLKIDTLIRHLKTFAPSLSQGN
        LSYRLFQGSH             PRVFDT DWDEATDGFFV+KELA+RILNSLT +SRSLAT  SLMS+RRL+ID+LIRHLKTFA S S+ N
Subjt:  LSYRLFQGSH-------------PRVFDTMDWDEATDGFFVNKELATRILNSLTVESRSLATTNSLMSKRRLKIDTLIRHLKTFAPSLSQGN

TrEMBL top hitse value%identityAlignment
A0A1S3C400 uncharacterized protein LOC1034962201.8e-10073.36Show/hide
Query:  MNLIAKTRLSKTISDMGPFYPQLIREFVVNLPTDFNDPNSPDYQTVHIRGFKFSITPAVINGFLGNAVSLTLLH------------HPWTLSSWPVNGIL
        MNLI K  LSKTISD+GPFYPQLIREFVVNLPTDFNDP+SP+YQT+HIRGFK +I+P VINGFLGN VS+                   TLSSWPVNGI 
Subjt:  MNLIAKTRLSKTISDMGPFYPQLIREFVVNLPTDFNDPNSPDYQTVHIRGFKFSITPAVINGFLGNAVSLTLLH------------HPWTLSSWPVNGIL

Query:  AAALSVN--VSATLGTFLYRICNDDRVDAGAFIYNQLLRHVGSFRVKLPIALPRFFSGLLLHLNAAILTTSDAPGPDPKTLSLSYRLFQGSH--------
        AAALSV   +   +GTFLYRI NDDRVDAGAFIYNQLLRHVGSF VKLPIALPRF SGLLLHLNAAILTTSDAP PDPKTLSLSYRLFQGSH        
Subjt:  AAALSVN--VSATLGTFLYRICNDDRVDAGAFIYNQLLRHVGSFRVKLPIALPRFFSGLLLHLNAAILTTSDAPGPDPKTLSLSYRLFQGSH--------

Query:  -----PRVFDTMDWDEATDGFFVNKELATRILNSLTVESRSLATTNSLMSKRRLKIDTLIRHLKTFAPSLSQGN
             PRVFDT DWDEATDGFFV+KELA+RILNSLT ES SLAT  SL+S+ RL+ID LIRHLKTFAPS S+G+
Subjt:  -----PRVFDTMDWDEATDGFFVNKELATRILNSLTVESRSLATTNSLMSKRRLKIDTLIRHLKTFAPSLSQGN

A0A1S3CC38 uncharacterized protein LOC1034991383.9e-10375Show/hide
Query:  MNLIAKTRLSKTISDMGPFYPQLIREFVVNLPTDFNDPNSPDYQTVHIRGFKFSITPAVINGFLGNAVSLTLLHHP------------WTLSSWPVNGIL
        MNLIAK  LSKTISD+G FYPQLIREFVVNLP DFNDP+SPDYQ VHIRGFKFSITPAVINGFLGN VS+  +                TLSSWP NGI 
Subjt:  MNLIAKTRLSKTISDMGPFYPQLIREFVVNLPTDFNDPNSPDYQTVHIRGFKFSITPAVINGFLGNAVSLTLLHHP------------WTLSSWPVNGIL

Query:  AAALSVNVSATLGTFLYRICNDDRVDAGAFIYNQLLRHVGSFRVKLPIALPRFFSGLLLHLNAAILTTSDAPGPDPKTLSLSYRLFQGSH----------
        A ALSVNVSA LGTFLY ICNDDRVDA AFIYNQLLRHVGSF VKLPIALPRFFSGLLLHLNA ILTTSDAP PDPKTLSLSYRLFQG H          
Subjt:  AAALSVNVSATLGTFLYRICNDDRVDAGAFIYNQLLRHVGSFRVKLPIALPRFFSGLLLHLNAAILTTSDAPGPDPKTLSLSYRLFQGSH----------

Query:  ---PRVFDTMDWDEATDGFFVNKELATRILNSLTVESRSLATTNSLMSKRRLKIDTLIRHLKTFAPSLSQGN
            RV D  DWDEATDGFFV+KELA+RILNSLT ESRSLAT  SLMS+RRL++D+LI HLKTFA S S+GN
Subjt:  ---PRVFDTMDWDEATDGFFVNKELATRILNSLTVESRSLATTNSLMSKRRLKIDTLIRHLKTFAPSLSQGN

A0A1S3CS20 uncharacterized protein LOC1035041011.4e-10070.89Show/hide
Query:  MNLIAKTRLSKTISDMGPFYPQLIREFVVNLPTDFNDPNSPDYQTVHIRGFKFSITPAVINGFLGN------AVSLTLLH------HPWTLSSWPVNGIL
        MNLIAK  LSKTISD+G FYPQLIREFVVNLPTDFNDP+SP+YQTVHIR FKF ITPAVINGFLGN      A+S+ L+           LSSW VNGI 
Subjt:  MNLIAKTRLSKTISDMGPFYPQLIREFVVNLPTDFNDPNSPDYQTVHIRGFKFSITPAVINGFLGN------AVSLTLLH------HPWTLSSWPVNGIL

Query:  AAALSV--------------------NVSATLGTFLYRICNDDRVDAGAFIYNQLLRHVGSFRVKLPIALPRFFSGLLLHLNAAILTTSDAPGPDPKTLS
        AAALSV                    +VSA LGTFLYRICNDD+VDAGAFIYNQLLRHVGSF VKLPIALPRFFSGLLLHLN AILT+SDAP PDPKTLS
Subjt:  AAALSV--------------------NVSATLGTFLYRICNDDRVDAGAFIYNQLLRHVGSFRVKLPIALPRFFSGLLLHLNAAILTTSDAPGPDPKTLS

Query:  LSYRLFQGSH-------------PRVFDTMDWDEATDGFFVNKELATRILNSLTVESRSLATTNSLMSKRRLKIDTLIRHLKTFAPSLSQGN
        LSYRLFQGSH             PRVFDT DWDEATDGFFV+KELA+RILNSLT +SRSLAT  SLMS+RRL+ID+LIRHLKTFA S S+ N
Subjt:  LSYRLFQGSH-------------PRVFDTMDWDEATDGFFVNKELATRILNSLTVESRSLATTNSLMSKRRLKIDTLIRHLKTFAPSLSQGN

A0A5A7VFI0 Uncharacterized protein2.5e-10270.89Show/hide
Query:  MNLIAKTRLSKTISDMGPFYPQLIREFVVNLPTDFNDPNSPDYQTVHIRGFKFSITPAVINGFLGNAVSLTL-LHHP-----------WTLSSWPVNGIL
        MN IAK  LSKTISD+GPF+PQLIREFVVNLPTDFNDP+ PDYQ VHI+GFKFSITPAVINGFLGNAVS+   L  P            TLSSWPVNGI 
Subjt:  MNLIAKTRLSKTISDMGPFYPQLIREFVVNLPTDFNDPNSPDYQTVHIRGFKFSITPAVINGFLGNAVSLTL-LHHP-----------WTLSSWPVNGIL

Query:  AAALSV--------------------NVSATLGTFLYRICNDDRVDAGAFIYNQLLRHVGSFRVKLPIALPRFFSGLLLHLNAAILTTSDAPGPDPKTLS
        AAALSV                    +VSA LG FLYRICNDDRVDAG FIYN+LLRHV SF VKLPIALPRFFSGLLLHLNAAILTTSDAP PDPKTLS
Subjt:  AAALSV--------------------NVSATLGTFLYRICNDDRVDAGAFIYNQLLRHVGSFRVKLPIALPRFFSGLLLHLNAAILTTSDAPGPDPKTLS

Query:  LSYRLFQGSH-------------PRVFDTMDWDEATDGFFVNKELATRILNSLTVESRSLATTNSLMSKRRLKIDTLIRHLKTFAPSLSQGN
        LSYRLFQG+H             P+VFDT +WDEATDGFFV+KELA+RILN+LT ESRSL T  SLMS+RRL+ID+LIRHLKT APSL+QGN
Subjt:  LSYRLFQGSH-------------PRVFDTMDWDEATDGFFVNKELATRILNSLTVESRSLATTNSLMSKRRLKIDTLIRHLKTFAPSLSQGN

A0A5D3DMD7 Uncharacterized protein1.4e-10070.89Show/hide
Query:  MNLIAKTRLSKTISDMGPFYPQLIREFVVNLPTDFNDPNSPDYQTVHIRGFKFSITPAVINGFLGN------AVSLTLLH------HPWTLSSWPVNGIL
        MNLIAK  LSKTISD+G FYPQLIREFVVNLPTDFNDP+SP+YQTVHIR FKF ITPAVINGFLGN      A+S+ L+           LSSW VNGI 
Subjt:  MNLIAKTRLSKTISDMGPFYPQLIREFVVNLPTDFNDPNSPDYQTVHIRGFKFSITPAVINGFLGN------AVSLTLLH------HPWTLSSWPVNGIL

Query:  AAALSV--------------------NVSATLGTFLYRICNDDRVDAGAFIYNQLLRHVGSFRVKLPIALPRFFSGLLLHLNAAILTTSDAPGPDPKTLS
        AAALSV                    +VSA LGTFLYRICNDD+VDAGAFIYNQLLRHVGSF VKLPIALPRFFSGLLLHLN AILT+SDAP PDPKTLS
Subjt:  AAALSV--------------------NVSATLGTFLYRICNDDRVDAGAFIYNQLLRHVGSFRVKLPIALPRFFSGLLLHLNAAILTTSDAPGPDPKTLS

Query:  LSYRLFQGSH-------------PRVFDTMDWDEATDGFFVNKELATRILNSLTVESRSLATTNSLMSKRRLKIDTLIRHLKTFAPSLSQGN
        LSYRLFQGSH             PRVFDT DWDEATDGFFV+KELA+RILNSLT +SRSLAT  SLMS+RRL+ID+LIRHLKTFA S S+ N
Subjt:  LSYRLFQGSH-------------PRVFDTMDWDEATDGFFVNKELATRILNSLTVESRSLATTNSLMSKRRLKIDTLIRHLKTFAPSLSQGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCTGATTGCGAAGACTAGACTATCTAAAACTATTTCTGATATGGGCCCGTTCTATCCTCAACTTATTAGAGAATTTGTAGTTAATTTGCCAACTGATTTCAATGA
CCCAAATAGCCCGGATTATCAGACGGTCCATATCAGAGGCTTTAAATTTTCAATTACTCCGGCTGTTATAAATGGTTTTTTGGGTAATGCTGTCTCATTAACTTTGCTCC
ATCATCCCTGGACATTATCCTCGTGGCCTGTGAATGGTATACTTGCTGCTGCGTTAAGTGTTAATGTTTCTGCTACGTTGGGCACCTTCTTGTATCGCATCTGCAATGAT
GACAGGGTAGACGCTGGTGCATTTATCTACAATCAGCTATTAAGGCATGTAGGATCCTTTAGAGTCAAGCTTCCGATTGCTCTACCAAGGTTCTTTTCGGGGTTATTGCT
ACATTTAAATGCTGCTATATTGACCACCTCAGACGCACCTGGCCCTGATCCTAAGACTTTGTCACTGAGCTACAGACTATTTCAAGGCAGTCATCCTCGAGTGTTTGATA
CGATGGACTGGGATGAAGCTACTGATGGGTTCTTTGTTAATAAGGAATTGGCTACCAGAATTCTAAATTCTCTTACAGTTGAATCTCGTTCACTAGCTACTACCAATAGT
CTGATGTCTAAACGGCGTTTGAAAATTGACACTCTTATTCGGCATTTGAAGACTTTTGCTCCTTCTTTAAGCCAAGGGAACTCAGTACTGATTGATGTATTTTTTTTCTG
GTTCAAAGAGGGAGTGTTGGTGGTGCTTGGTGCAGGTGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAATCTGATTGCGAAGACTAGACTATCTAAAACTATTTCTGATATGGGCCCGTTCTATCCTCAACTTATTAGAGAATTTGTAGTTAATTTGCCAACTGATTTCAATGA
CCCAAATAGCCCGGATTATCAGACGGTCCATATCAGAGGCTTTAAATTTTCAATTACTCCGGCTGTTATAAATGGTTTTTTGGGTAATGCTGTCTCATTAACTTTGCTCC
ATCATCCCTGGACATTATCCTCGTGGCCTGTGAATGGTATACTTGCTGCTGCGTTAAGTGTTAATGTTTCTGCTACGTTGGGCACCTTCTTGTATCGCATCTGCAATGAT
GACAGGGTAGACGCTGGTGCATTTATCTACAATCAGCTATTAAGGCATGTAGGATCCTTTAGAGTCAAGCTTCCGATTGCTCTACCAAGGTTCTTTTCGGGGTTATTGCT
ACATTTAAATGCTGCTATATTGACCACCTCAGACGCACCTGGCCCTGATCCTAAGACTTTGTCACTGAGCTACAGACTATTTCAAGGCAGTCATCCTCGAGTGTTTGATA
CGATGGACTGGGATGAAGCTACTGATGGGTTCTTTGTTAATAAGGAATTGGCTACCAGAATTCTAAATTCTCTTACAGTTGAATCTCGTTCACTAGCTACTACCAATAGT
CTGATGTCTAAACGGCGTTTGAAAATTGACACTCTTATTCGGCATTTGAAGACTTTTGCTCCTTCTTTAAGCCAAGGGAACTCAGTACTGATTGATGTATTTTTTTTCTG
GTTCAAAGAGGGAGTGTTGGTGGTGCTTGGTGCAGGTGGATAG
Protein sequenceShow/hide protein sequence
MNLIAKTRLSKTISDMGPFYPQLIREFVVNLPTDFNDPNSPDYQTVHIRGFKFSITPAVINGFLGNAVSLTLLHHPWTLSSWPVNGILAAALSVNVSATLGTFLYRICND
DRVDAGAFIYNQLLRHVGSFRVKLPIALPRFFSGLLLHLNAAILTTSDAPGPDPKTLSLSYRLFQGSHPRVFDTMDWDEATDGFFVNKELATRILNSLTVESRSLATTNS
LMSKRRLKIDTLIRHLKTFAPSLSQGNSVLIDVFFFWFKEGVLVVLGAGG