; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0015533 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0015533
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase
Genome locationchr01:30045852..30046532
RNA-Seq ExpressionPay0015533
SyntenyPay0015533
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031931.1 pol protein [Cucumis melo var. makuwa]3.0e-11996.02Show/hide
Query:  MVDIREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +VD REVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPY+MAPAELKELK+QLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMR
Subjt:  MVDIREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
        LCIDYRELNKVTVKNRY LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRS+YG YEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Subjt:  LCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV

Query:  FIDDILIYSKTEAEHEEHLRMVLQTL
        FIDDILIYSKTEAEHEEHLR+VLQTL
Subjt:  FIDDILIYSKTEAEHEEHLRMVLQTL

KAA0032356.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.8e-11996.02Show/hide
Query:  MVDIREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +VD REVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPY+MAPAELKELK+QLQELLDKGFIRPSVSPWGAP+LFVKKKDGSMR
Subjt:  MVDIREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
        LCIDYRELNKVTVKNRY LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRS+YG YEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Subjt:  LCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV

Query:  FIDDILIYSKTEAEHEEHLRMVLQTL
        FIDDILIYSKTEAEHEEHLR+VLQTL
Subjt:  FIDDILIYSKTEAEHEEHLRMVLQTL

KAA0040871.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.0e-11996.02Show/hide
Query:  MVDIREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +VD REVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELK+QLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Subjt:  MVDIREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
        LCIDYRELNKVTVKN+Y LP+IDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRS+YG YEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Subjt:  LCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV

Query:  FIDDILIYSKTEAEHEEHLRMVLQTL
        FIDDILIYSKTEAEHEEHLR+VLQTL
Subjt:  FIDDILIYSKTEAEHEEHLRMVLQTL

KAA0047194.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.8e-11996.46Show/hide
Query:  MVDIREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +VD REVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPY+MAPAELKELK+QLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Subjt:  MVDIREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
        LCIDYRELNKVTVKNRY LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRS+YG YEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Subjt:  LCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV

Query:  FIDDILIYSKTEAEHEEHLRMVLQTL
        FIDDILIYSK EAEHEEHLRMVLQTL
Subjt:  FIDDILIYSKTEAEHEEHLRMVLQTL

KAA0047433.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.3e-11996.46Show/hide
Query:  MVDIREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +VD REVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPY+MAPAELKELK+QLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Subjt:  MVDIREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
        LCIDYRELNKVTVKNRY LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRS+YG YEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Subjt:  LCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV

Query:  FIDDILIYSKTEAEHEEHLRMVLQTL
        FIDDILIYSKTEAEHEEHLR+VLQTL
Subjt:  FIDDILIYSKTEAEHEEHLRMVLQTL

TrEMBL top hitse value%identityAlignment
A0A5A7SQP5 Ty3-gypsy retrotransposon protein8.5e-12096.02Show/hide
Query:  MVDIREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +VD REVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPY+MAPAELKELK+QLQELLDKGFIRPSVSPWGAP+LFVKKKDGSMR
Subjt:  MVDIREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
        LCIDYRELNKVTVKNRY LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRS+YG YEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Subjt:  LCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV

Query:  FIDDILIYSKTEAEHEEHLRMVLQTL
        FIDDILIYSKTEAEHEEHLR+VLQTL
Subjt:  FIDDILIYSKTEAEHEEHLRMVLQTL

A0A5A7SQU8 Reverse transcriptase1.4e-11996.02Show/hide
Query:  MVDIREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +VD REVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPY+MAPAELKELK+QLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMR
Subjt:  MVDIREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
        LCIDYRELNKVTVKNRY LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRS+YG YEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Subjt:  LCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV

Query:  FIDDILIYSKTEAEHEEHLRMVLQTL
        FIDDILIYSKTEAEHEEHLR+VLQTL
Subjt:  FIDDILIYSKTEAEHEEHLRMVLQTL

A0A5A7TGS7 Reverse transcriptase1.4e-11996.02Show/hide
Query:  MVDIREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +VD REVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELK+QLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Subjt:  MVDIREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
        LCIDYRELNKVTVKN+Y LP+IDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRS+YG YEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Subjt:  LCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV

Query:  FIDDILIYSKTEAEHEEHLRMVLQTL
        FIDDILIYSKTEAEHEEHLR+VLQTL
Subjt:  FIDDILIYSKTEAEHEEHLRMVLQTL

A0A5A7TV57 Ty3-gypsy retrotransposon protein6.5e-12096.46Show/hide
Query:  MVDIREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +VD REVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPY+MAPAELKELK+QLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Subjt:  MVDIREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
        LCIDYRELNKVTVKNRY LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRS+YG YEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Subjt:  LCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV

Query:  FIDDILIYSKTEAEHEEHLRMVLQTL
        FIDDILIYSKTEAEHEEHLR+VLQTL
Subjt:  FIDDILIYSKTEAEHEEHLRMVLQTL

A0A5A7TW65 DNA/RNA polymerases superfamily protein8.5e-12096.46Show/hide
Query:  MVDIREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +VD REVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPY+MAPAELKELK+QLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Subjt:  MVDIREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
        LCIDYRELNKVTVKNRY LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRS+YG YEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Subjt:  LCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV

Query:  FIDDILIYSKTEAEHEEHLRMVLQTL
        FIDDILIYSK EAEHEEHLRMVLQTL
Subjt:  FIDDILIYSKTEAEHEEHLRMVLQTL

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein6.0e-3838.81Show/hide
Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRIDDL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N Y LP I+ L
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRIDDL

Query:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ 
Subjt:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQT

Query:  L
        L
Subjt:  L

P0CT35 Transposon Tf2-2 polyprotein6.0e-3838.81Show/hide
Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRIDDL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N Y LP I+ L
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRIDDL

Query:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ 
Subjt:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQT

Query:  L
        L
Subjt:  L

P0CT41 Transposon Tf2-12 polyprotein6.0e-3838.81Show/hide
Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRIDDL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N Y LP I+ L
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYLLPRIDDL

Query:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ 
Subjt:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQT

Query:  L
        L
Subjt:  L

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein2.2e-4042.86Show/hide
Query:  YPDVFPEELPGLPP---HREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
        Y ++   +LP  P    +  V+  IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+ V KKDG+ RLC+DYR LNK T+ + 
Subjt:  YPDVFPEELPGLPP---HREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR

Query:  YLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE
        + LPRID+L  ++  A +F+ +DL SGYHQ+ ++  D  KTAF +  G+YE+ VM FGL NAP+ F   M   FR+    FV V++DDILI+S++  EH 
Subjt:  YLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE

Query:  EHLRMVLQTL
        +HL  VL+ L
Subjt:  EHLRMVLQTL

Q99315 Transposon Ty3-G Gag-Pol polyprotein2.2e-4042.86Show/hide
Query:  YPDVFPEELPGLPP---HREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
        Y ++   +LP  P    +  V+  IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+ V KKDG+ RLC+DYR LNK T+ + 
Subjt:  YPDVFPEELPGLPP---HREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR

Query:  YLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE
        + LPRID+L  ++  A +F+ +DL SGYHQ+ ++  D  KTAF +  G+YE+ VM FGL NAP+ F   M   FR+    FV V++DDILI+S++  EH 
Subjt:  YLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE

Query:  EHLRMVLQTL
        +HL  VL+ L
Subjt:  EHLRMVLQTL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGATATTAGAGAGGTCGATGTATCCCTGTCATCAGAACCAGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGGT
TGAGTTTGCCATAGAGTTGGAGCCAGGCACGGTTCCTATATCCAGAGCCCCGTACAAAATGGCCCCAGCAGAGTTGAAAGAACTGAAATTACAGTTACAGGAATTGCTTG
ATAAGGGATTCATTCGACCGAGTGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAATAAG
GTAACGGTTAAGAACAGATATCTCTTGCCCAGGATCGACGATCTGTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGCT
GAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAAATACGGACAATATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGG
ACTTGATGAATAGAGTGTTTAGGGAGTTCCTAGACACTTTTGTAATCGTGTTTATTGATGATATCTTGATATATTCCAAGACGGAGGCCGAGCATGAGGAGCATTTACGT
ATGGTTCTGCAAACACTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGATATTAGAGAGGTCGATGTATCCCTGTCATCAGAACCAGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGGT
TGAGTTTGCCATAGAGTTGGAGCCAGGCACGGTTCCTATATCCAGAGCCCCGTACAAAATGGCCCCAGCAGAGTTGAAAGAACTGAAATTACAGTTACAGGAATTGCTTG
ATAAGGGATTCATTCGACCGAGTGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAATAAG
GTAACGGTTAAGAACAGATATCTCTTGCCCAGGATCGACGATCTGTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGCT
GAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAAATACGGACAATATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGG
ACTTGATGAATAGAGTGTTTAGGGAGTTCCTAGACACTTTTGTAATCGTGTTTATTGATGATATCTTGATATATTCCAAGACGGAGGCCGAGCATGAGGAGCATTTACGT
ATGGTTCTGCAAACACTGTGA
Protein sequenceShow/hide protein sequence
MVDIREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKLQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
VTVKNRYLLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGQYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR
MVLQTL