CuGenDBv2

Gene ID	Pay0015585
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Ty1-copia retrotransposon protein
Genome location	chr12:17604771..17606020
RNA-Seq Expression	Pay0015585
Synteny	Pay0015585
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type IPR036875 - Zinc finger, CCHC-type superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYK04394.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]

8.7e-160

79.68

Show/hide

Query:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGH
        MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLP+SD PTTTSTSSDPESSTGPLT VAVTDQVKKDQVIDPEKYAKDNKTVRGH
Subjt:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGH

Query:  LLNHMSNPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------
        LLNHMS+PMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVV KWLQFQMTDDKPV+EQIHEYENLVANVLSEGMKMCEILQANVL              
Subjt:  LLNHMSNPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------

Query:  -------------------------------------------------DRTKQEKWHKGKYSEKKQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
                                                         DRTKQEK HKGK SEK+QFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Subjt:  -------------------------------------------------DRTKQEKWHKGKYSEKKQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG

Query:  RPSQKSTPQANLAEQDSEIITAIVEANLIENKTYWILDTGASRHFCTNRELLHDYEDTVDGECVFMGNSATAEVIGKGK
        RPSQK TPQANLAEQDSEII AIVEANLIENKT WILDTGASRHFCTNRELLHDYEDT DGECVFMGNSATA VIGKGK
Subjt:  RPSQKSTPQANLAEQDSEIITAIVEANLIENKTYWILDTGASRHFCTNRELLHDYEDTVDGECVFMGNSATAEVIGKGK

TYK11299.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]

1.8e-165

93.99

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Query:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGH
        MSIKTSNKILPDLSKLEPLD TNYRRWSQKLLIFFEQLEVDYVLTTDLP+SD PTTTSTSSDPESSTGPLT VAVT+QVK DQVIDPEKYAKDNKTVRGH
Subjt:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGH

Query:  LLNHMSNPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKWHKGKYS
        LLNHMS+PMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVV KWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANV+DRTKQEK HKGK S
Subjt:  LLNHMSNPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKWHKGKYS

Query:  EKKQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKSTPQANLAEQDSEIITAIVEANLIENKTYWILDTGASRHFCTNRELLHDYEDTVDGEC
        EK+QFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQK TPQANLAEQDS+II  IVEANLIENKT WILDTGASRHFCTNRELLHDYEDT DGEC
Subjt:  EKKQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKSTPQANLAEQDSEIITAIVEANLIENKTYWILDTGASRHFCTNRELLHDYEDTVDGEC

Query:  VFMGNSATAEVIGKGK
        VFMGNSATA VIGKGK
Subjt:  VFMGNSATAEVIGKGK

TYK11996.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]

1.5e-167

80.36

Show/hide

Query:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGH
        MSIKTSNKILPDLSKLEPL+GTNYRRWSQKLLIFFEQLEVDYVLTTDLP+SD PTTTSTSSDPESSTGPLT VAVTDQVKKDQVIDPEKYAKDNKTVRGH
Subjt:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGH

Query:  LLNHMSNPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------
        LLNHMS+PMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVV KWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL              
Subjt:  LLNHMSNPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------

Query:  -------------------------------------------------DRTKQEKWHKGKYSEKKQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
                                                         DRTKQEK HKGK SEK+QFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Subjt:  -------------------------------------------------DRTKQEKWHKGKYSEKKQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG

Query:  RPSQKSTPQANLAEQDSEIITAIVEANLIENKTYWILDTGASRHFCTNRELLHDYEDTVDGECVFMGNSATAEVIGKGKEPGVWESVESGRA
        RPSQK TPQANLAEQDSEII AIVEANLIENKT WILDTGASRHFCTNRELLHDYEDT DGECVFMGNSATA VIGKGKEPGVWESVESGRA
Subjt:  RPSQKSTPQANLAEQDSEIITAIVEANLIENKTYWILDTGASRHFCTNRELLHDYEDTVDGECVFMGNSATAEVIGKGKEPGVWESVESGRA

TYK24060.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]

1.5e-167

80.36

Show/hide

Query:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGH
        MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLP+SD PTTTSTSSDPESSTGPLT VAVTDQVKKDQVIDPEKYAKDNKTVRGH
Subjt:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGH

Query:  LLNHMSNPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------
        LLNHMS+PMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVV KWLQFQM DDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL              
Subjt:  LLNHMSNPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------

Query:  -------------------------------------------------DRTKQEKWHKGKYSEKKQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
                                                         DRTKQEK HKGK SEK+QFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Subjt:  -------------------------------------------------DRTKQEKWHKGKYSEKKQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG

Query:  RPSQKSTPQANLAEQDSEIITAIVEANLIENKTYWILDTGASRHFCTNRELLHDYEDTVDGECVFMGNSATAEVIGKGKEPGVWESVESGRA
        RPSQK TPQANLAEQDSEII AIVEANLIENKT WILDTGASRHFCTNRELLHDYEDT DGECVFMGNSATA VIGKGKEPGVWESVESGRA
Subjt:  RPSQKSTPQANLAEQDSEIITAIVEANLIENKTYWILDTGASRHFCTNRELLHDYEDTVDGECVFMGNSATAEVIGKGKEPGVWESVESGRA

XP_008445782.1 PREDICTED: uncharacterized protein LOC103488707 [Cucumis melo]

1.8e-173

94.22

Show/hide

Query:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGH
        MSIKTSNKILPDLSKLEPLD TNYRRWSQKLLIFFEQLEVDYVLTTDLP+SD PTTTSTSSDPESSTGPLT VAVT+QVK DQVIDPEKYAKDNKTVRGH
Subjt:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGH

Query:  LLNHMSNPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKWHKGKYS
        LLNHMS+PMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVV KWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANV+DRTKQEK HKGK S
Subjt:  LLNHMSNPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKWHKGKYS

Query:  EKKQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKSTPQANLAEQDSEIITAIVEANLIENKTYWILDTGASRHFCTNRELLHDYEDTVDGEC
        EK+QFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQK TPQANLAEQDS+II  IVEANLIENKT WILDTGASRHFCTNRELLHDYEDT DGEC
Subjt:  EKKQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKSTPQANLAEQDSEIITAIVEANLIENKTYWILDTGASRHFCTNRELLHDYEDTVDGEC

Query:  VFMGNSATAEVIGKGKEPGVWESVESGRA
        VFMGNSATA VIGKGKEPGVWESVESGRA
Subjt:  VFMGNSATAEVIGKGKEPGVWESVESGRA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BE75 uncharacterized protein LOC103488707

8.7e-174

94.22

Show/hide

Query:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGH
        MSIKTSNKILPDLSKLEPLD TNYRRWSQKLLIFFEQLEVDYVLTTDLP+SD PTTTSTSSDPESSTGPLT VAVT+QVK DQVIDPEKYAKDNKTVRGH
Subjt:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGH

Query:  LLNHMSNPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKWHKGKYS
        LLNHMS+PMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVV KWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANV+DRTKQEK HKGK S
Subjt:  LLNHMSNPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKWHKGKYS

Query:  EKKQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKSTPQANLAEQDSEIITAIVEANLIENKTYWILDTGASRHFCTNRELLHDYEDTVDGEC
        EK+QFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQK TPQANLAEQDS+II  IVEANLIENKT WILDTGASRHFCTNRELLHDYEDT DGEC
Subjt:  EKKQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKSTPQANLAEQDSEIITAIVEANLIENKTYWILDTGASRHFCTNRELLHDYEDTVDGEC

Query:  VFMGNSATAEVIGKGKEPGVWESVESGRA
        VFMGNSATA VIGKGKEPGVWESVESGRA
Subjt:  VFMGNSATAEVIGKGKEPGVWESVESGRA

A0A5D3BZI1 Ty1-copia retrotransposon protein

4.2e-160

79.68

Show/hide

Query:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGH
        MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLP+SD PTTTSTSSDPESSTGPLT VAVTDQVKKDQVIDPEKYAKDNKTVRGH
Subjt:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGH

Query:  LLNHMSNPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------
        LLNHMS+PMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVV KWLQFQMTDDKPV+EQIHEYENLVANVLSEGMKMCEILQANVL              
Subjt:  LLNHMSNPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------

Query:  -------------------------------------------------DRTKQEKWHKGKYSEKKQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
                                                         DRTKQEK HKGK SEK+QFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Subjt:  -------------------------------------------------DRTKQEKWHKGKYSEKKQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG

Query:  RPSQKSTPQANLAEQDSEIITAIVEANLIENKTYWILDTGASRHFCTNRELLHDYEDTVDGECVFMGNSATAEVIGKGK
        RPSQK TPQANLAEQDSEII AIVEANLIENKT WILDTGASRHFCTNRELLHDYEDT DGECVFMGNSATA VIGKGK
Subjt:  RPSQKSTPQANLAEQDSEIITAIVEANLIENKTYWILDTGASRHFCTNRELLHDYEDTVDGECVFMGNSATAEVIGKGK

A0A5D3CM58 Ty1-copia retrotransposon protein

8.7e-166

93.99

Show/hide

Query:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGH
        MSIKTSNKILPDLSKLEPLD TNYRRWSQKLLIFFEQLEVDYVLTTDLP+SD PTTTSTSSDPESSTGPLT VAVT+QVK DQVIDPEKYAKDNKTVRGH
Subjt:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGH

Query:  LLNHMSNPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKWHKGKYS
        LLNHMS+PMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVV KWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANV+DRTKQEK HKGK S
Subjt:  LLNHMSNPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKWHKGKYS

Query:  EKKQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKSTPQANLAEQDSEIITAIVEANLIENKTYWILDTGASRHFCTNRELLHDYEDTVDGEC
        EK+QFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQK TPQANLAEQDS+II  IVEANLIENKT WILDTGASRHFCTNRELLHDYEDT DGEC
Subjt:  EKKQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKSTPQANLAEQDSEIITAIVEANLIENKTYWILDTGASRHFCTNRELLHDYEDTVDGEC

Query:  VFMGNSATAEVIGKGK
        VFMGNSATA VIGKGK
Subjt:  VFMGNSATAEVIGKGK

A0A5D3CNJ2 Ty1-copia retrotransposon protein

7.1e-168

80.36

Show/hide

Query:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGH
        MSIKTSNKILPDLSKLEPL+GTNYRRWSQKLLIFFEQLEVDYVLTTDLP+SD PTTTSTSSDPESSTGPLT VAVTDQVKKDQVIDPEKYAKDNKTVRGH
Subjt:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGH

Query:  LLNHMSNPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------
        LLNHMS+PMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVV KWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL              
Subjt:  LLNHMSNPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------

Query:  -------------------------------------------------DRTKQEKWHKGKYSEKKQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
                                                         DRTKQEK HKGK SEK+QFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Subjt:  -------------------------------------------------DRTKQEKWHKGKYSEKKQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG

Query:  RPSQKSTPQANLAEQDSEIITAIVEANLIENKTYWILDTGASRHFCTNRELLHDYEDTVDGECVFMGNSATAEVIGKGKEPGVWESVESGRA
        RPSQK TPQANLAEQDSEII AIVEANLIENKT WILDTGASRHFCTNRELLHDYEDT DGECVFMGNSATA VIGKGKEPGVWESVESGRA
Subjt:  RPSQKSTPQANLAEQDSEIITAIVEANLIENKTYWILDTGASRHFCTNRELLHDYEDTVDGECVFMGNSATAEVIGKGKEPGVWESVESGRA

A0A5D3DL36 Ty1-copia retrotransposon protein

7.1e-168

80.36

Show/hide

Query:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGH
        MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLP+SD PTTTSTSSDPESSTGPLT VAVTDQVKKDQVIDPEKYAKDNKTVRGH
Subjt:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGH

Query:  LLNHMSNPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------
        LLNHMS+PMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVV KWLQFQM DDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL              
Subjt:  LLNHMSNPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------

Query:  -------------------------------------------------DRTKQEKWHKGKYSEKKQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
                                                         DRTKQEK HKGK SEK+QFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Subjt:  -------------------------------------------------DRTKQEKWHKGKYSEKKQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG

Query:  RPSQKSTPQANLAEQDSEIITAIVEANLIENKTYWILDTGASRHFCTNRELLHDYEDTVDGECVFMGNSATAEVIGKGKEPGVWESVESGRA
        RPSQK TPQANLAEQDSEII AIVEANLIENKT WILDTGASRHFCTNRELLHDYEDT DGECVFMGNSATA VIGKGKEPGVWESVESGRA
Subjt:  RPSQKSTPQANLAEQDSEIITAIVEANLIENKTYWILDTGASRHFCTNRELLHDYEDTVDGECVFMGNSATAEVIGKGKEPGVWESVESGRA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G00980.1 zinc knuckle (CCHC-type) family protein

8.2e-15

24.86

Show/hide

Query:  KLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSNPMFDLFV
        K+   DG +Y  W+ ++ +F +QL++ YVL+   PS        +S  PE++   +T    T           +K+ +D+     HL+N +S+ ++  + 
Subjt:  KLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSNPMFDLFV

Query:  VQ-KSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKW
         + K AK++W  L+  Y  D++  K+  VRK+++F+M +++P++EQ+  +  +  +++S GM + E    + +       W
Subjt:  VQ-KSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKW

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCGATCAAGACCTCCAACAAAATCCTACCGGACCTGTCTAAACTTGAGCCACTCGACGGAACAAACTACCGCCGTTGGTCCCAAAAGTTGCTAATCTTCTTTGAGCA
ACTAGAAGTTGATTATGTCCTCACTACAGATCTCCCGTCATCTGACCTCCCAACTACCACGTCAACATCCTCTGATCCAGAATCATCTACGGGGCCTCTTACAACTGTCG
CTGTCACTGATCAAGTAAAGAAGGACCAAGTGATTGATCCTGAAAAATATGCAAAGGATAACAAGACCGTTCGAGGACACCTGTTAAACCATATGTCAAACCCGATGTTT
GACCTCTTCGTAGTCCAAAAATCTGCCAAGGACATCTGGAGCACCCTGGAATCACGGTATGGAGGAGATGATGCTGGACGGAAAAAATATGTAGTTAGAAAATGGCTACA
ATTCCAGATGACTGACGACAAACCAGTCGTGGAACAAATACATGAGTACGAGAACTTGGTGGCAAACGTCCTGTCTGAAGGCATGAAGATGTGCGAAATACTTCAAGCAA
ATGTTCTAGACAGAACGAAACAGGAAAAATGGCATAAAGGGAAATACTCAGAGAAGAAACAATTCAAGACTACTGGGGGACAAATTAAGAAGAAAAAGTTGGTCTGCTAC
GTGTGCGGAAAGGAAGGGCACAAATCATACCAATGCAACCAGAGGAAAGGGAGGCCAAGTCAGAAATCAACACCTCAAGCCAATCTAGCAGAGCAAGACAGTGAGATCAT
AACAGCCATAGTAGAGGCCAATCTGATAGAAAACAAGACATACTGGATTCTCGACACTGGAGCCTCGAGACACTTCTGCACCAATCGTGAACTTCTCCATGACTATGAAG
ACACTGTCGATGGAGAATGCGTGTTCATGGGAAACTCAGCCACTGCAGAAGTAATCGGGAAAGGGAAGGAACCTGGTGTCTGGGAGTCTGTTGAATCGGGCCGGGCTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDLPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSNPMF
DLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVRKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKWHKGKYSEKKQFKTTGGQIKKKKLVCY
VCGKEGHKSYQCNQRKGRPSQKSTPQANLAEQDSEIITAIVEANLIENKTYWILDTGASRHFCTNRELLHDYEDTVDGECVFMGNSATAEVIGKGKEPGVWESVESGRA

Pay0015585 (gene) of Melon (Payzawat) v1 genome