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Pay0015604 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0015604
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionVQ motif-containing protein 8
Genome locationchr10:1675717..1676292
RNA-Seq ExpressionPay0015604
SyntenyPay0015604
Gene Ontology termsGO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000466 - maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0007276 - gamete generation (biological process)
GO:0051302 - regulation of cell division (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
GO:0070545 - PeBoW complex (cellular component)
GO:0043021 - ribonucleoprotein complex binding (molecular function)
InterPro domainsIPR008889 - VQ
IPR039607 - VQ motif-containing protein 8/17/18/20/21/25
IPR039833 - VQ motif-containing protein 8, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013019.1 VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-2554.81Show/hide
Query:  MSPPKSSQINGLRPSPLLIHNDSRLVRK----PQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQPERNSNDNDSTSGVTSEEDVNEKQSNCS
        MSPPK   I+G RP PLL+H  SR +RK    PQLR+P+IIYTHSPKIIHT PKDFMALVQRLTG +  PP  ++  +DN+ +S V +EED     SNC 
Subjt:  MSPPKSSQINGLRPSPLLIHNDSRLVRK----PQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQPERNSNDNDSTSGVTSEEDVNEKQSNCS

Query:  VLKYSSDVTTPFSSPAFLSSLSPSFMDFLKALPEF
        +          F+  + ++SLSPSFM+FLK LPEF
Subjt:  VLKYSSDVTTPFSSPAFLSSLSPSFMDFLKALPEF

KGN52621.2 hypothetical protein Csa_008052 [Cucumis sativus]2.9e-3479.61Show/hide
Query:  MSPPKSSQINGLRPSPLLIHNDSRLVRKP-QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQP---------ERNSNDNDSTSGVTSEEDVNE
        MSPPKSS+ING RPSPLLIHN SRL+RKP QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTG NPPPP P         ERN NDNDS+SGVT+EED+NE
Subjt:  MSPPKSSQINGLRPSPLLIHNDSRLVRKP-QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQP---------ERNSNDNDSTSGVTSEEDVNE

Query:  KQS
        KQ+
Subjt:  KQS

XP_008466850.1 PREDICTED: VQ motif-containing protein 8, chloroplastic-like [Cucumis melo]3.2e-65100Show/hide
Query:  MSPPKSSQINGLRPSPLLIHNDSRLVRKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQPERNSNDNDSTSGVTSEEDVNEKQSNCSVLKY
        MSPPKSSQINGLRPSPLLIHNDSRLVRKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQPERNSNDNDSTSGVTSEEDVNEKQSNCSVLKY
Subjt:  MSPPKSSQINGLRPSPLLIHNDSRLVRKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQPERNSNDNDSTSGVTSEEDVNEKQSNCSVLKY

Query:  SSDVTTPFSSPAFLSSLSPSFMDFLKALPEF
        SSDVTTPFSSPAFLSSLSPSFMDFLKALPEF
Subjt:  SSDVTTPFSSPAFLSSLSPSFMDFLKALPEF

XP_022150646.1 VQ motif-containing protein 8, chloroplastic [Momordica charantia]1.5e-3056.44Show/hide
Query:  MSPPKSSQINGLRPSPLLIHNDSRLVRK--PQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPP----QPERNSN---DNDSTSGVTSEED----
        MSP KS  ING RPSPLLIH  SRL+RK  PQLRQPLIIYTHSPKIIHT PKDFMALVQRLTGF PPPP      +RN+N   DNDS+S +T E +    
Subjt:  MSPPKSSQINGLRPSPLLIHNDSRLVRK--PQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPP----QPERNSN---DNDSTSGVTSEED----

Query:  ------VNEKQSNCSVLKYSSDV-------------TTPFSSPAFLSSLSPSFMDFLKALPEF
              V E QS      + +DV              T F+SP   +SLSPSFM+FLK LPEF
Subjt:  ------VNEKQSNCSVLKYSSDV-------------TTPFSSPAFLSSLSPSFMDFLKALPEF

XP_038893302.1 VQ motif-containing protein 8, chloroplastic [Benincasa hispida]2.1e-4869.23Show/hide
Query:  MSPPKSSQINGLRPSPLLIHNDSRLVRKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQP----------ERNSNDNDSTSGVTSEEDVNE
        MSPPKS +ING RPSPLLIH DSR +RKPQLRQP+IIYTHSPKIIHT PKDFMALVQRLTGFNPPPP P          ERN NDNDS+SG+T+EE++NE
Subjt:  MSPPKSSQINGLRPSPLLIHNDSRLVRKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQP----------ERNSNDNDSTSGVTSEEDVNE

Query:  ---------------KQSNCSVLKYSSDVTTPFSSPAFLSSLSPSFMDFLKALPEF
                       +QSN S+L+YSSDVTTPFSSPA ++SLSPSFM+FLKALPEF
Subjt:  ---------------KQSNCSVLKYSSDVTTPFSSPAFLSSLSPSFMDFLKALPEF

TrEMBL top hitse value%identityAlignment
A0A0A0KT78 VQ domain-containing protein1.4e-5384.62Show/hide
Query:  MSPPKSSQINGLRPSPLLIHNDSRLVRKP-QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQP---------ERNSNDNDSTSGVTSEEDVNE
        MSPPKSS+ING RPSPLLIHN SRL+RKP QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTG NPPPP P         ERN NDNDS+SGVT+EED+NE
Subjt:  MSPPKSSQINGLRPSPLLIHNDSRLVRKP-QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQP---------ERNSNDNDSTSGVTSEEDVNE

Query:  KQSNCSVLKYSS-DVTTPFSSPAFL-SSLSPSFMDFLKALPEF
        KQSNCSVLKYSS DVTTPFSSPAFL SSLSPSFMDFLKALPEF
Subjt:  KQSNCSVLKYSS-DVTTPFSSPAFL-SSLSPSFMDFLKALPEF

A0A1S3CS67 VQ motif-containing protein 8, chloroplastic-like1.6e-65100Show/hide
Query:  MSPPKSSQINGLRPSPLLIHNDSRLVRKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQPERNSNDNDSTSGVTSEEDVNEKQSNCSVLKY
        MSPPKSSQINGLRPSPLLIHNDSRLVRKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQPERNSNDNDSTSGVTSEEDVNEKQSNCSVLKY
Subjt:  MSPPKSSQINGLRPSPLLIHNDSRLVRKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQPERNSNDNDSTSGVTSEEDVNEKQSNCSVLKY

Query:  SSDVTTPFSSPAFLSSLSPSFMDFLKALPEF
        SSDVTTPFSSPAFLSSLSPSFMDFLKALPEF
Subjt:  SSDVTTPFSSPAFLSSLSPSFMDFLKALPEF

A0A5D3CFH5 VQ motif-containing protein 81.6e-65100Show/hide
Query:  MSPPKSSQINGLRPSPLLIHNDSRLVRKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQPERNSNDNDSTSGVTSEEDVNEKQSNCSVLKY
        MSPPKSSQINGLRPSPLLIHNDSRLVRKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQPERNSNDNDSTSGVTSEEDVNEKQSNCSVLKY
Subjt:  MSPPKSSQINGLRPSPLLIHNDSRLVRKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQPERNSNDNDSTSGVTSEEDVNEKQSNCSVLKY

Query:  SSDVTTPFSSPAFLSSLSPSFMDFLKALPEF
        SSDVTTPFSSPAFLSSLSPSFMDFLKALPEF
Subjt:  SSDVTTPFSSPAFLSSLSPSFMDFLKALPEF

A0A6J1DC48 VQ motif-containing protein 8, chloroplastic7.3e-3156.44Show/hide
Query:  MSPPKSSQINGLRPSPLLIHNDSRLVRK--PQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPP----QPERNSN---DNDSTSGVTSEED----
        MSP KS  ING RPSPLLIH  SRL+RK  PQLRQPLIIYTHSPKIIHT PKDFMALVQRLTGF PPPP      +RN+N   DNDS+S +T E +    
Subjt:  MSPPKSSQINGLRPSPLLIHNDSRLVRK--PQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPP----QPERNSN---DNDSTSGVTSEED----

Query:  ------VNEKQSNCSVLKYSSDV-------------TTPFSSPAFLSSLSPSFMDFLKALPEF
              V E QS      + +DV              T F+SP   +SLSPSFM+FLK LPEF
Subjt:  ------VNEKQSNCSVLKYSSDV-------------TTPFSSPAFLSSLSPSFMDFLKALPEF

A0A6P6V8N0 VQ motif-containing protein 8, chloroplastic-like2.5e-1538.22Show/hide
Query:  INGLRPSPLLIHNDSRLVRKP---------------------QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQPER------------NSND
        ING RPSPL I+ DS +++KP                     Q RQP+IIYTHSPKIIHT PKDFMALVQ+LTGF+    Q               +  D
Subjt:  INGLRPSPLLIHNDSRLVRKP---------------------QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQPER------------NSND

Query:  NDSTSGVTSEEDVNEKQSNCSVLKYSSDVTTP-----------------------------------FSSPAFLSSLSPSFMDFLKALPEF
        NDS+S VTS +D  E  +   V+K SS   +P                                   F+SP  +SSLSPSF++F+K LPE+
Subjt:  NDSTSGVTSEEDVNEKQSNCSVLKYSSDVTTP-----------------------------------FSSPAFLSSLSPSFMDFLKALPEF

SwissProt top hitse value%identityAlignment
F4HWF9 Nuclear speckle RNA-binding protein B2.3e-0531.82Show/hide
Query:  PKSSQINGLRPSPLLIHNDS-RLVRKPQLRQ-----------------------PLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQPERNSNDNDST
        P+S    G +P+PL +  DS ++++KP L                         P+ IYT +P+IIHTHP +FM LVQRLTG      Q   ++  + S+
Subjt:  PKSSQINGLRPSPLLIHNDS-RLVRKPQLRQ-----------------------PLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQPERNSNDNDST

Query:  SGVTSEEDVN
        S  +  +D +
Subjt:  SGVTSEEDVN

Q8LGD5 Protein MKS12.4e-0740.28Show/hide
Query:  QINGLRPSPLLIHNDSRLVRKPQL----------------RQPLIIYTHSPKIIHTHPKDFMALVQRLTGFN
        QI G RPSPL +H DS  ++KP                  R+P++IY  SPK++H    +FM +VQRLTG +
Subjt:  QINGLRPSPLLIHNDSRLVRKPQL----------------RQPLIIYTHSPKIIHTHPKDFMALVQRLTGFN

Q9CA36 VQ motif-containing protein 8, chloroplastic4.0e-1034.44Show/hide
Query:  MSPPKSSQINGLRPSPLLIHNDSRLVRK---------PQLR-QPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQPERNSNDNDSTSGVTSE-----
        M P + ++ING RPS L +  +S  ++K         P  R  P+IIY HSPK+IHT  +DFMALVQRLTG +    +  R +    S+S VT E     
Subjt:  MSPPKSSQINGLRPSPLLIHNDSRLVRK---------PQLR-QPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQPERNSNDNDSTSGVTSE-----

Query:  --------EDVNEKQSNCSVLKYSSDVTTPFSSPAFLSSLSPSFMDFLKAL
                +D  ++Q    +  ++    T F SP  L  +SP+  D  + L
Subjt:  --------EDVNEKQSNCSVLKYSSDVTTPFSSPAFLSSLSPSFMDFLKAL

Q9LS54 VQ motif-containing protein 203.4e-0951.72Show/hide
Query:  PSPLLIHNDSRLVRKP----------QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTG
        P  L ++ DS +++KP          + R P+IIYTH+P+IIHT+PKDFMALVQ+LTG
Subjt:  PSPLLIHNDSRLVRKP----------QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTG

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding1.6e-0631.82Show/hide
Query:  PKSSQINGLRPSPLLIHNDS-RLVRKPQLRQ-----------------------PLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQPERNSNDNDST
        P+S    G +P+PL +  DS ++++KP L                         P+ IYT +P+IIHTHP +FM LVQRLTG      Q   ++  + S+
Subjt:  PKSSQINGLRPSPLLIHNDS-RLVRKPQLRQ-----------------------PLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQPERNSNDNDST

Query:  SGVTSEEDVN
        S  +  +D +
Subjt:  SGVTSEEDVN

AT1G21326.1 VQ motif-containing protein4.5e-0942.68Show/hide
Query:  PKSSQINGLRPSPLLIHNDS-RLVRKPQLRQ-----------------------PLIIYTHSPKIIHTHPKDFMALVQRLTG
        P+S  I G RP PL +  DS ++++KP L                         P+IIYT SP+IIHTHP +FM LVQRLTG
Subjt:  PKSSQINGLRPSPLLIHNDS-RLVRKPQLRQ-----------------------PLIIYTHSPKIIHTHPKDFMALVQRLTG

AT1G68450.1 VQ motif-containing protein2.8e-1134.44Show/hide
Query:  MSPPKSSQINGLRPSPLLIHNDSRLVRK---------PQLR-QPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQPERNSNDNDSTSGVTSE-----
        M P + ++ING RPS L +  +S  ++K         P  R  P+IIY HSPK+IHT  +DFMALVQRLTG +    +  R +    S+S VT E     
Subjt:  MSPPKSSQINGLRPSPLLIHNDSRLVRK---------PQLR-QPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQPERNSNDNDSTSGVTSE-----

Query:  --------EDVNEKQSNCSVLKYSSDVTTPFSSPAFLSSLSPSFMDFLKAL
                +D  ++Q    +  ++    T F SP  L  +SP+  D  + L
Subjt:  --------EDVNEKQSNCSVLKYSSDVTTPFSSPAFLSSLSPSFMDFLKAL

AT3G18360.1 VQ motif-containing protein2.4e-1051.72Show/hide
Query:  PSPLLIHNDSRLVRKP----------QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTG
        P  L ++ DS +++KP          + R P+IIYTH+P+IIHT+PKDFMALVQ+LTG
Subjt:  PSPLLIHNDSRLVRKP----------QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTG

AT3G18690.1 MAP kinase substrate 11.7e-0840.28Show/hide
Query:  QINGLRPSPLLIHNDSRLVRKPQL----------------RQPLIIYTHSPKIIHTHPKDFMALVQRLTGFN
        QI G RPSPL +H DS  ++KP                  R+P++IY  SPK++H    +FM +VQRLTG +
Subjt:  QINGLRPSPLLIHNDSRLVRKPQL----------------RQPLIIYTHSPKIIHTHPKDFMALVQRLTGFN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCCACCTAAATCTTCCCAAATCAATGGCCTTCGCCCTTCTCCTCTCTTAATCCACAACGATTCTCGTCTTGTTCGTAAGCCCCAGCTCCGGCAGCCACTCATCAT
TTACACCCATTCCCCCAAAATCATCCACACCCACCCTAAGGATTTCATGGCATTGGTTCAACGCCTCACTGGCTTCAACCCACCACCGCCGCAGCCGGAAAGAAATTCCA
ACGACAATGATTCTACGTCGGGTGTGACGTCGGAGGAGGATGTTAATGAAAAACAGAGTAATTGTTCGGTTCTTAAGTATTCTTCTGATGTTACGACGCCGTTTTCGTCC
CCTGCTTTCCTTAGCTCCTTATCCCCTTCTTTCATGGACTTTCTTAAAGCCCTCCCTGAATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATTTTTCTCCCCCTTCTTTCGGTTAACTTTTTACTTCCAATTAAAATTACACACAAAATCCAATCCCAAATCTCTCTGGTTTTTTCCTGATTAATAATTAAATTCATCCA
CCATGAGCCCACCTAAATCTTCCCAAATCAATGGCCTTCGCCCTTCTCCTCTCTTAATCCACAACGATTCTCGTCTTGTTCGTAAGCCCCAGCTCCGGCAGCCACTCATC
ATTTACACCCATTCCCCCAAAATCATCCACACCCACCCTAAGGATTTCATGGCATTGGTTCAACGCCTCACTGGCTTCAACCCACCACCGCCGCAGCCGGAAAGAAATTC
CAACGACAATGATTCTACGTCGGGTGTGACGTCGGAGGAGGATGTTAATGAAAAACAGAGTAATTGTTCGGTTCTTAAGTATTCTTCTGATGTTACGACGCCGTTTTCGT
CCCCTGCTTTCCTTAGCTCCTTATCCCCTTCTTTCATGGACTTTCTTAAAGCCCTCCCTGAATTTTAATTCTTCTTCTTCTTCTTCCTAATTCTCTCTGCTTTTTACATC
ATTTGGAATTAAAGATTGTATAATTT
Protein sequenceShow/hide protein sequence
MSPPKSSQINGLRPSPLLIHNDSRLVRKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPQPERNSNDNDSTSGVTSEEDVNEKQSNCSVLKYSSDVTTPFSS
PAFLSSLSPSFMDFLKALPEF