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Pay0015634 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0015634
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description50S ribosomal protein L18
Genome locationchr02:17744044..17746151
RNA-Seq ExpressionPay0015634
SyntenyPay0015634
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008097 - 5S rRNA binding (molecular function)
InterPro domainsIPR005484 - Ribosomal protein L18
IPR036967 - Ribosomal protein S11 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590442.1 hypothetical protein SDJN03_15865, partial [Cucurbita argyrosperma subsp. sororia]3.6e-4094.79Show/hide
Query:  MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
        MVIPPP++PPRL QYLKPYVLKMHFTNK+VSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERL+LKGIPAVCVHLKREQKYH
Subjt:  MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
XP_004144339.1 uncharacterized protein LOC101221233 [Cucumis sativus]1.0e-3995.83Show/hide
Query:  MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
        MVIPPPIKPPRL QYLKPYVLKMHFTNKFVSAQVIHSETA VASAASSQEKAL+SSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQ+YH
Subjt:  MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
XP_008462699.1 PREDICTED: 50S ribosomal protein L18 [Cucumis melo]8.5e-42100Show/hide
Query:  MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
        MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
Subjt:  MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
XP_022961444.1 uncharacterized protein LOC111462025 [Cucurbita moschata]4.7e-4094.79Show/hide
Query:  MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
        MVIPPP++PPRL QYLKPYVLKMHFTNK+VSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERL+LKGIPAVCVHLKREQKYH
Subjt:  MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
XP_022968817.1 uncharacterized protein LOC111467940 [Cucurbita maxima]1.0e-3993.75Show/hide
Query:  MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
        MVIPPP++PPRL QYLKPYVLKMHFTNK+VSAQVIHSETATVASAASSQEK LRSSMESTRDVAAAAKIGKLLGERL+LKGIPAVCVHLKREQKYH
Subjt:  MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
TrEMBL top hitse value%identityAlignment
A0A0A0L0Z6 Uncharacterized protein5.0e-4095.83Show/hide
Query:  MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
        MVIPPPIKPPRL QYLKPYVLKMHFTNKFVSAQVIHSETA VASAASSQEKAL+SSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQ+YH
Subjt:  MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
A0A1S3CHJ0 50S ribosomal protein L184.1e-42100Show/hide
Query:  MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
        MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
Subjt:  MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
A0A5D3DYC1 50S ribosomal protein L184.1e-42100Show/hide
Query:  MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
        MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
Subjt:  MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
A0A6J1HE21 uncharacterized protein LOC1114620252.3e-4094.79Show/hide
Query:  MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
        MVIPPP++PPRL QYLKPYVLKMHFTNK+VSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERL+LKGIPAVCVHLKREQKYH
Subjt:  MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
A0A6J1I0R8 uncharacterized protein LOC1114679405.0e-4093.75Show/hide
Query:  MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
        MVIPPP++PPRL QYLKPYVLKMHFTNK+VSAQVIHSETATVASAASSQEK LRSSMESTRDVAAAAKIGKLLGERL+LKGIPAVCVHLKREQKYH
Subjt:  MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
SwissProt top hitse value%identityAlignment
A1S234 50S ribosomal protein L183.3e-0439.29Show/hide
Query:  IQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
        IQ L  + L +H T + + AQVI+ E A V +AAS+ EK+++ +++ST +V AA  +GK + ER + KG+  V    +   KYH
Subjt:  IQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
A4YBW7 50S ribosomal protein L183.3e-0438.89Show/hide
Query:  IKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
        I+  + IQ L    L +H T + + AQVI+ E A V +AAS+ EKA++  ++ST +V AA  +GK + ER + KG+ +V    +   KYH
Subjt:  IKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
A7IPQ4 50S ribosomal protein L183.9e-0546.15Show/hide
Query:  LKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAV
        L +H T++ + AQVI        +AASS EK LR+S+++  D  AA  IGKL+ ER L KG+ AV
Subjt:  LKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAV
A8IAP8 50S ribosomal protein L182.3e-0547.69Show/hide
Query:  LKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAV
        L +H T+K + AQ+I         AASS EK LRSS+++  DV AA  IGKL+ ER   KG+ AV
Subjt:  LKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAV
P52863 50S ribosomal protein L182.5e-0444.62Show/hide
Query:  LKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAV
        L +H T + V AQVI S  + V +AAS+ EKA+R  +++T +V AA  +GK + ER L KG+  V
Subjt:  LKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAV
Arabidopsis top hitse value%identityAlignment
AT3G20230.1 Ribosomal L18p/L5e family protein9.5e-0732.26Show/hide
Query:  RLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHDVEGKKG
        R   Y++P++L + F+ KF+ A+V+H  T+ V S A++  + +R+++ S  D  A   IGKL+ ER +   + AV    ++ ++   +EGK G
Subjt:  RLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHDVEGKKG
AT5G27820.1 Ribosomal L18p/L5e family protein1.4e-3476.04Show/hide
Query:  MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH
        MVIPP ++PPRL  YLKPYVLKMHFTNKFV AQVIHS TATVA +ASSQEKALR +M+ TRDVAAA+KIGK+LGERLL+K IPAV + +K+EQ+YH
Subjt:  MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATTCCTCCTCCTATCAAGCCACCAAGATTAATCCAGTATCTAAAGCCATATGTCTTGAAGATGCACTTCACAAACAAGTTTGTGAGTGCCCAGGTGATCCACTC
TGAAACAGCCACTGTTGCTTCGGCCGCAAGCTCACAAGAGAAGGCATTGCGGTCAAGTATGGAGTCGACAAGGGATGTGGCTGCTGCTGCAAAGATTGGAAAATTGTTGG
GAGAGAGGCTTTTGCTTAAGGGAATCCCGGCTGTTTGTGTGCACTTGAAAAGAGAACAGAAATATCATGACGTTGAGGGTAAGAAGGGTAAGAGGAGTTGCTTCGTGTGG
AAGCTAAGCGAGCAAGCGGTGTTCCCTTTATATTTCCTTGTAGTAAGGGAGAGATTATACTCCTAA
mRNA sequenceShow/hide mRNA sequence
TTTTGTATAAAACCTAAACCATGGTTTCTTCTTATAACTTTTTCCTGCCTCTCTCTCCAATTGTCTGTTGTGTAGGCGATAGGCGTGTTCTTCCGGCAACCTCACGTAGC
CGTTTCCCATCAAGAGTATAATTGAGTTGGAGTAGTCAAGGGAGATGGTGATTCCTCCTCCTATCAAGCCACCAAGATTAATCCAGTATCTAAAGCCATATGTCTTGAAG
ATGCACTTCACAAACAAGTTTGTGAGTGCCCAGGTGATCCACTCTGAAACAGCCACTGTTGCTTCGGCCGCAAGCTCACAAGAGAAGGCATTGCGGTCAAGTATGGAGTC
GACAAGGGATGTGGCTGCTGCTGCAAAGATTGGAAAATTGTTGGGAGAGAGGCTTTTGCTTAAGGGAATCCCGGCTGTTTGTGTGCACTTGAAAAGAGAACAGAAATATC
ATGACGTTGAGGGTAAGAAGGGTAAGAGGAGTTGCTTCGTGTGGAAGCTAAGCGAGCAAGCGGTGTTCCCTTTATATTTCCTTGTAGTAAGGGAGAGATTATACTCCTAA
ACACCTTGAATGTCAAGGGCTGCAAGAGAGTTTATGTAAAGGATAGGATAGACGTTCAAGATTTAGGATTTACCTCTGTATTAAAGAAAAG
Protein sequenceShow/hide protein sequence
MVIPPPIKPPRLIQYLKPYVLKMHFTNKFVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHDVEGKKGKRSCFVW
KLSEQAVFPLYFLVVRERLYS