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Pay0015694 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0015694
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr10:7685927..7688545
RNA-Seq ExpressionPay0015694
SyntenyPay0015694
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.5e-1039.36Show/hide
Query:  PNDSKGYDYPTWNLDTDGKFIVASVKKAITNLDQRNETNVIADIFLQLWKSKISKKGWFLSWSLSHNCINTSDVLQRKIHSLELNPNSCSLCNK
        P  ++G+  P WNL+++  F  ASVK+AI      +  N   +++  LWK +  KK  F  W+L H CINT+D LQ+++ +  L+PN C +CNK
Subjt:  PNDSKGYDYPTWNLDTDGKFIVASVKKAITNLDQRNETNVIADIFLQLWKSKISKKGWFLSWSLSHNCINTSDVLQRKIHSLELNPNSCSLCNK

KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]6.6e-0937.23Show/hide
Query:  PNDSKGYDYPTWNLDTDGKFIVASVKKAITNLDQRNETNVIADIFLQLWKSKISKKGWFLSWSLSHNCINTSDVLQRKIHSLELNPNSCSLCNK
        P   +G   P W L+++  F  AS+KK ++     + TN    ++  LWK    KK  F  W+L H CINT+D LQ+++ +  L+PN C +CNK
Subjt:  PNDSKGYDYPTWNLDTDGKFIVASVKKAITNLDQRNETNVIADIFLQLWKSKISKKGWFLSWSLSHNCINTSDVLQRKIHSLELNPNSCSLCNK

KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]6.6e-0937.23Show/hide
Query:  PNDSKGYDYPTWNLDTDGKFIVASVKKAITNLDQRNETNVIADIFLQLWKSKISKKGWFLSWSLSHNCINTSDVLQRKIHSLELNPNSCSLCNK
        P   +G   P W L+++  F  AS+KK ++     + TN    ++  LWK    KK  F  W+L H CINT+D LQ+++ +  L+PN C +CNK
Subjt:  PNDSKGYDYPTWNLDTDGKFIVASVKKAITNLDQRNETNVIADIFLQLWKSKISKKGWFLSWSLSHNCINTSDVLQRKIHSLELNPNSCSLCNK

TYJ98385.1 retrotransposon protein, putative, unclassified [Cucumis melo var. makuwa]2.3e-0938.78Show/hide
Query:  QTIIYPPNDSKGYDYPTWNLDTDGKFIVASVKKAITNLDQRNETNVIADIFLQLWKSKISKKGWFLSWSLSHNCINTSDVLQRKIHSLELNPNSCSLC
        ++I+   + +KG   P+W L++ G F +ASVKKAI+        N  +  F  LWKS I KK  F  W++ H  +N++DV+QR+  ++ LNPN C  C
Subjt:  QTIIYPPNDSKGYDYPTWNLDTDGKFIVASVKKAITNLDQRNETNVIADIFLQLWKSKISKKGWFLSWSLSHNCINTSDVLQRKIHSLELNPNSCSLC

XP_031744692.1 uncharacterized protein LOC116405125 [Cucumis sativus]4.4e-1344.21Show/hide
Query:  PPNDSKGYDYPTWNLDTDGKFIVASVKKA--ITNLDQRNETNVIADIFLQLWKSKISKKGWFLSWSLSHNCINTSDVLQRKIHSLELNPNSCSLC
        PP    G+D P W L+ +G F VAS+K A  + N D+ NE +   +I+  LWKS I K+  F  W+L H CINT D+LQR++ +  L P+ C LC
Subjt:  PPNDSKGYDYPTWNLDTDGKFIVASVKKA--ITNLDQRNETNVIADIFLQLWKSKISKKGWFLSWSLSHNCINTSDVLQRKIHSLELNPNSCSLC

TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein1.7e-1039.36Show/hide
Query:  PNDSKGYDYPTWNLDTDGKFIVASVKKAITNLDQRNETNVIADIFLQLWKSKISKKGWFLSWSLSHNCINTSDVLQRKIHSLELNPNSCSLCNK
        P  ++G+  P WNL+++  F  ASVK+AI      +  N   +++  LWK +  KK  F  W+L H CINT+D LQ+++ +  L+PN C +CNK
Subjt:  PNDSKGYDYPTWNLDTDGKFIVASVKKAITNLDQRNETNVIADIFLQLWKSKISKKGWFLSWSLSHNCINTSDVLQRKIHSLELNPNSCSLCNK

A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein3.2e-0937.23Show/hide
Query:  PNDSKGYDYPTWNLDTDGKFIVASVKKAITNLDQRNETNVIADIFLQLWKSKISKKGWFLSWSLSHNCINTSDVLQRKIHSLELNPNSCSLCNK
        P   +G   P W L+++  F  AS+KK ++     + TN    ++  LWK    KK  F  W+L H CINT+D LQ+++ +  L+PN C +CNK
Subjt:  PNDSKGYDYPTWNLDTDGKFIVASVKKAITNLDQRNETNVIADIFLQLWKSKISKKGWFLSWSLSHNCINTSDVLQRKIHSLELNPNSCSLCNK

A0A5A7TSA7 LINE-1 retrotransposable element ORF2 protein3.2e-0937.23Show/hide
Query:  PNDSKGYDYPTWNLDTDGKFIVASVKKAITNLDQRNETNVIADIFLQLWKSKISKKGWFLSWSLSHNCINTSDVLQRKIHSLELNPNSCSLCNK
        P  ++G   P W L+++  F  ASVKK ++     +  N   +++  LWK +  KK  F  W+L H CINT+D LQ+++ +  L+PN C +CNK
Subjt:  PNDSKGYDYPTWNLDTDGKFIVASVKKAITNLDQRNETNVIADIFLQLWKSKISKKGWFLSWSLSHNCINTSDVLQRKIHSLELNPNSCSLCNK

A0A5D3BJ44 Retrotransposon protein, putative, unclassified1.1e-0938.78Show/hide
Query:  QTIIYPPNDSKGYDYPTWNLDTDGKFIVASVKKAITNLDQRNETNVIADIFLQLWKSKISKKGWFLSWSLSHNCINTSDVLQRKIHSLELNPNSCSLC
        ++I+   + +KG   P+W L++ G F +ASVKKAI+        N  +  F  LWKS I KK  F  W++ H  +N++DV+QR+  ++ LNPN C  C
Subjt:  QTIIYPPNDSKGYDYPTWNLDTDGKFIVASVKKAITNLDQRNETNVIADIFLQLWKSKISKKGWFLSWSLSHNCINTSDVLQRKIHSLELNPNSCSLC

A0A5D3E1E3 LINE-1 retrotransposable element ORF2 protein3.2e-0937.23Show/hide
Query:  PNDSKGYDYPTWNLDTDGKFIVASVKKAITNLDQRNETNVIADIFLQLWKSKISKKGWFLSWSLSHNCINTSDVLQRKIHSLELNPNSCSLCNK
        P  ++G   P W L+++  F  ASVKK ++     +  N   +++  LWK +  KK  F  W+L H CINT+D LQ+++ +  L+PN C +CNK
Subjt:  PNDSKGYDYPTWNLDTDGKFIVASVKKAITNLDQRNETNVIADIFLQLWKSKISKKGWFLSWSLSHNCINTSDVLQRKIHSLELNPNSCSLCNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACAATACCAAACAATTATTTACCCTCCAAATGACAGCAAAGGTTATGATTATCCCACTTGGAACTTGGACACTGATGGCAAATTTATCGTAGCATCTGTT
AAAAAAGCCATTACCAACTTGGATCAAAGAAATGAGACAAATGTCATTGCTGATATCTTCTTACAACTCTGGAAATCTAAAATTTCCAAAAAGGGCTGGTTCCTC
AGTTGGTCACTCTCACACAACTGCATTAACACTTCTGACGTTCTCCAAAGAAAGATCCATTCTCTCGAGCTCAATCCTAATTCGTGTTCTTTATGCAACAAGAGA
TTGAACACATCTTTATTTCTTGCCAAATCACTAAGGTATTTTGGGCTAAACTTGAAAGTCTTCTCGGTTGGAGGATCCATCATCAAAAATTCAAATTACACTTTC
CGCCGTCAGTTGAGAATTAATAGCCCCTCGGATGAAGAATATTTGGATCACTTTCAAAAGTTAAAGGCCAAAACCAAACCCTCAACAAAATCTGTCTACCGTATC
AAGAAACAACTGGCAACAAAAGCTACAAAGAAGCAACTTCATTCAATCATTGTCAAAGACAAAGGAAAGGAAGACAACAGCTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGACAATACCAAACAATTATTTACCCTCCAAATGACAGCAAAGGTTATGATTATCCCACTTGGAACTTGGACACTGATGGCAAATTTATCGTAGCATCTGTT
AAAAAAGCCATTACCAACTTGGATCAAAGAAATGAGACAAATGTCATTGCTGATATCTTCTTACAACTCTGGAAATCTAAAATTTCCAAAAAGGGCTGGTTCCTC
AGTTGGTCACTCTCACACAACTGCATTAACACTTCTGACGTTCTCCAAAGAAAGATCCATTCTCTCGAGCTCAATCCTAATTCGTGTTCTTTATGCAACAAGAGA
TTGAACACATCTTTATTTCTTGCCAAATCACTAAGGTATTTTGGGCTAAACTTGAAAGTCTTCTCGGTTGGAGGATCCATCATCAAAAATTCAAATTACACTTTC
CGCCGTCAGTTGAGAATTAATAGCCCCTCGGATGAAGAATATTTGGATCACTTTCAAAAGTTAAAGGCCAAAACCAAACCCTCAACAAAATCTGTCTACCGTATC
AAGAAACAACTGGCAACAAAAGCTACAAAGAAGCAACTTCATTCAATCATTGTCAAAGACAAAGGAAAGGAAGACAACAGCTTATAA
Protein sequenceShow/hide protein sequence
MGQYQTIIYPPNDSKGYDYPTWNLDTDGKFIVASVKKAITNLDQRNETNVIADIFLQLWKSKISKKGWFLSWSLSHNCINTSDVLQRKIHSLELNPNSCSLCNKR
LNTSLFLAKSLRYFGLNLKVFSVGGSIIKNSNYTFRRQLRINSPSDEEYLDHFQKLKAKTKPSTKSVYRIKKQLATKATKKQLHSIIVKDKGKEDNSL