CuGenDBv2

Gene ID	Pay0015743
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Ty3/gypsy retrotransposon protein
Genome location	chr05:7007269..7008378
RNA-Seq Expression	Pay0015743
Synteny	Pay0015743
Gene Ontology terms	GO:0007034 - vacuolar transport (biological process) GO:0015074 - DNA integration (biological process) GO:0005768 - endosome (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	IPR000953 - Chromo/chromo shadow domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR016197 - Chromo-like domain superfamily IPR023780 - Chromo domain IPR036397 - Ribonuclease H superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025132.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

1.4e-211

97.8

Show/hide

Query:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
        MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKH YTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIF+SHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
Subjt:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV

Query:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
        NKSVEAYL+CFCGEKPR+WSQWLHWAEYWYNTTYHGSIGI+PFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
Subjt:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR

Query:  RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQSLDPFVNECHEWITQPEEIY
        RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPY+ILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKE+QSLDPFVNECHEWITQPEEIY
Subjt:  RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQSLDPFVNECHEWITQPEEIY

Query:  AYRKNQTTKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN
        AYRKNQ TKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN
Subjt:  AYRKNQTTKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN

KAA0049630.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

3.2e-211

97.52

Show/hide

Query:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
        MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKH YTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIF+SHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
Subjt:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV

Query:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
        NKSVEAYL+CFCGEKPR+WSQWLHWAEYWYNTTYHGSIGI+PFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
Subjt:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR

Query:  RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQSLDPFVNECHEWITQPEEIY
        RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPY+ILERIGTVAYKLELP+NAAIHPVFHVSQLKKAIGNIKE+QSLDPFVNECHEWITQPEEIY
Subjt:  RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQSLDPFVNECHEWITQPEEIY

Query:  AYRKNQTTKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN
        AYRKNQ TKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN
Subjt:  AYRKNQTTKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN

KAA0049776.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

9.3e-211

97.52

Show/hide

Query:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
        MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKH YTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIF+SHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
Subjt:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV

Query:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
        NKSVEAYL+CFCGEKPR+WSQWLHWAEYWYNTTYHGSIGI+PFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
Subjt:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR

Query:  RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQSLDPFVNECHEWITQPEEIY
        RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPY+ILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNI+E QSLDPFVNECHEWITQPEEIY
Subjt:  RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQSLDPFVNECHEWITQPEEIY

Query:  AYRKNQTTKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN
        AYRKNQ TKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN
Subjt:  AYRKNQTTKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN

TYK15990.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

3.2e-211

97.52

Show/hide

Query:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
        MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKH YTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIF+SHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
Subjt:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV

Query:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
        NKSVEAYL+CFCGEKPR+WSQWLHWAEYWYNTTYHGSIGI+PFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
Subjt:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR

Query:  RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQSLDPFVNECHEWITQPEEIY
        RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPY+ILERIGTVAYKLELP+NAAIHPVFHVSQLKKAIGNIKE+QSLDPFVNECHEWITQPEEIY
Subjt:  RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQSLDPFVNECHEWITQPEEIY

Query:  AYRKNQTTKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN
        AYRKNQ TKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN
Subjt:  AYRKNQTTKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN

TYK23090.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

1.4e-211

97.8

Show/hide

Query:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
        MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKH YTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIF+SHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
Subjt:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV

Query:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
        NKSVEAYL+CFCGEKPR+WSQWLHWAEYWYNTTYHGSIGI+PFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
Subjt:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR

Query:  RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQSLDPFVNECHEWITQPEEIY
        RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPY+ILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKE+QSLDPFVNECHEWITQPEEIY
Subjt:  RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQSLDPFVNECHEWITQPEEIY

Query:  AYRKNQTTKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN
        AYRKNQ TKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN
Subjt:  AYRKNQTTKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SIV7 Ty3/gypsy retrotransposon protein

6.9e-212

97.8

Show/hide

Query:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
        MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKH YTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIF+SHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
Subjt:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV

Query:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
        NKSVEAYL+CFCGEKPR+WSQWLHWAEYWYNTTYHGSIGI+PFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
Subjt:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR

Query:  RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQSLDPFVNECHEWITQPEEIY
        RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPY+ILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKE+QSLDPFVNECHEWITQPEEIY
Subjt:  RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQSLDPFVNECHEWITQPEEIY

Query:  AYRKNQTTKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN
        AYRKNQ TKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN
Subjt:  AYRKNQTTKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN

A0A5A7U2S1 Ty3/gypsy retrotransposon protein

1.5e-211

97.52

Show/hide

Query:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
        MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKH YTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIF+SHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
Subjt:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV

Query:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
        NKSVEAYL+CFCGEKPR+WSQWLHWAEYWYNTTYHGSIGI+PFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
Subjt:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR

Query:  RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQSLDPFVNECHEWITQPEEIY
        RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPY+ILERIGTVAYKLELP+NAAIHPVFHVSQLKKAIGNIKE+QSLDPFVNECHEWITQPEEIY
Subjt:  RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQSLDPFVNECHEWITQPEEIY

Query:  AYRKNQTTKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN
        AYRKNQ TKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN
Subjt:  AYRKNQTTKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN

A0A5A7U6J3 Ty3/gypsy retrotransposon protein

4.5e-211

97.52

Show/hide

Query:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
        MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKH YTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIF+SHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
Subjt:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV

Query:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
        NKSVEAYL+CFCGEKPR+WSQWLHWAEYWYNTTYHGSIGI+PFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
Subjt:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR

Query:  RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQSLDPFVNECHEWITQPEEIY
        RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPY+ILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNI+E QSLDPFVNECHEWITQPEEIY
Subjt:  RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQSLDPFVNECHEWITQPEEIY

Query:  AYRKNQTTKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN
        AYRKNQ TKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN
Subjt:  AYRKNQTTKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN

A0A5D3CXB1 Ty3/gypsy retrotransposon protein

1.5e-211

97.52

Show/hide

Query:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
        MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKH YTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIF+SHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
Subjt:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV

Query:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
        NKSVEAYL+CFCGEKPR+WSQWLHWAEYWYNTTYHGSIGI+PFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
Subjt:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR

Query:  RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQSLDPFVNECHEWITQPEEIY
        RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPY+ILERIGTVAYKLELP+NAAIHPVFHVSQLKKAIGNIKE+QSLDPFVNECHEWITQPEEIY
Subjt:  RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQSLDPFVNECHEWITQPEEIY

Query:  AYRKNQTTKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN
        AYRKNQ TKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN
Subjt:  AYRKNQTTKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN

A0A5D3DI73 Ty3/gypsy retrotransposon protein

6.9e-212

97.8

Show/hide

Query:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
        MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKH YTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIF+SHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
Subjt:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV

Query:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
        NKSVEAYL+CFCGEKPR+WSQWLHWAEYWYNTTYHGSIGI+PFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
Subjt:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR

Query:  RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQSLDPFVNECHEWITQPEEIY
        RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPY+ILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKE+QSLDPFVNECHEWITQPEEIY
Subjt:  RDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQSLDPFVNECHEWITQPEEIY

Query:  AYRKNQTTKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN
        AYRKNQ TKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN
Subjt:  AYRKNQTTKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILFTYN

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.2e-38

35.4

Show/hide

Query:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
        MDFI  LP+S G+  + VVVDR SK A  +      TA+  A +F + V+   G PK I++D D IF S  W +        +  S  Y PQTDGQTE  
Subjt:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV

Query:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
        N++VE  L+C C   P  W   +   +  YN   H +  ++PF+ V+ R  P L    E+ + +   D+  ++   V   +KEHL     +MKK+ D+K 
Subjt:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR

Query:  RDV-EFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNA--AIHPVFHVSQLKK
        +++ EFQ GD V +K     +T    K N KL+P + GP+ +L++ G   Y+L+LP +        FHVS L+K
Subjt:  RDV-EFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNA--AIHPVFHVSQLKK

P0CT35 Transposon Tf2-2 polyprotein

1.2e-38

35.4

Show/hide

Query:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
        MDFI  LP+S G+  + VVVDR SK A  +      TA+  A +F + V+   G PK I++D D IF S  W +        +  S  Y PQTDGQTE  
Subjt:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV

Query:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
        N++VE  L+C C   P  W   +   +  YN   H +  ++PF+ V+ R  P L    E+ + +   D+  ++   V   +KEHL     +MKK+ D+K 
Subjt:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR

Query:  RDV-EFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNA--AIHPVFHVSQLKK
        +++ EFQ GD V +K     +T    K N KL+P + GP+ +L++ G   Y+L+LP +        FHVS L+K
Subjt:  RDV-EFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNA--AIHPVFHVSQLKK

P0CT36 Transposon Tf2-3 polyprotein

1.2e-38

35.4

Show/hide

Query:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
        MDFI  LP+S G+  + VVVDR SK A  +      TA+  A +F + V+   G PK I++D D IF S  W +        +  S  Y PQTDGQTE  
Subjt:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV

Query:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
        N++VE  L+C C   P  W   +   +  YN   H +  ++PF+ V+ R  P L    E+ + +   D+  ++   V   +KEHL     +MKK+ D+K 
Subjt:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR

Query:  RDV-EFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNA--AIHPVFHVSQLKK
        +++ EFQ GD V +K     +T    K N KL+P + GP+ +L++ G   Y+L+LP +        FHVS L+K
Subjt:  RDV-EFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNA--AIHPVFHVSQLKK

P0CT41 Transposon Tf2-12 polyprotein

1.2e-38

35.4

Show/hide

Query:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
        MDFI  LP+S G+  + VVVDR SK A  +      TA+  A +F + V+   G PK I++D D IF S  W +        +  S  Y PQTDGQTE  
Subjt:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV

Query:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
        N++VE  L+C C   P  W   +   +  YN   H +  ++PF+ V+ R  P L    E+ + +   D+  ++   V   +KEHL     +MKK+ D+K 
Subjt:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR

Query:  RDV-EFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNA--AIHPVFHVSQLKK
        +++ EFQ GD V +K     +T    K N KL+P + GP+ +L++ G   Y+L+LP +        FHVS L+K
Subjt:  RDV-EFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNA--AIHPVFHVSQLKK

Q9UR07 Transposon Tf2-11 polyprotein

1.2e-38

35.4

Show/hide

Query:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV
        MDFI  LP+S G+  + VVVDR SK A  +      TA+  A +F + V+   G PK I++D D IF S  W +        +  S  Y PQTDGQTE  
Subjt:  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVV

Query:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR
        N++VE  L+C C   P  W   +   +  YN   H +  ++PF+ V+ R  P L    E+ + +   D+  ++   V   +KEHL     +MKK+ D+K 
Subjt:  NKSVEAYLKCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKR

Query:  RDV-EFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNA--AIHPVFHVSQLKK
        +++ EFQ GD V +K     +T    K N KL+P + GP+ +L++ G   Y+L+LP +        FHVS L+K
Subjt:  RDV-EFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNA--AIHPVFHVSQLKK

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATTTCATCGAAGGGTTGCCCAAATCATACGGATGGGAAGTGATTCTGGTAGTTGTAGACCGGCTGAGTAAGTATGCACATTTCCTCACTCTAAAACATCTATACAC
TGCTAAGACCGTGGCTGAAGTGTTTGTTAAAGAAGTTGTAAGATTGCACGGATTTCCCAAGTCCATAGTTTCAGACCGAGATAAAATCTTTCTCAGCCACTTTTGGTCCG
AAATGTTCAAGCTGGCTGGCACCAAATTAAACCGAAGTTCCTCCTATCATCCTCAAACGGATGGACAAACCGAAGTAGTTAACAAAAGCGTAGAAGCTTACCTCAAGTGT
TTTTGCGGAGAAAAACCAAGAGAATGGAGTCAATGGCTGCACTGGGCCGAATACTGGTACAACACAACCTACCATGGATCAATTGGTATCAGCCCCTTCCAAGCAGTTTA
CGGGAGACTTCCACCACCATTGATCCAATACGGAGAGATGGAAACACCTAATTCCACGCTGGACCAGCAACTAAGAGACAGAGATGTTGTATTGGGGGCATTGAAAGAAC
ACTTACGGGTGGCCCAGGAAAGGATGAAGAAATTCGCAGACTTAAAAAGGAGAGATGTGGAGTTTCAAACCGGGGATTTTGTGTTCCTCAAACTGAGACCATACCGACAG
ACGTCCCTTCGAAAGAAACGCAATGAAAAACTATCTCCTAAGTACTTCGGACCATACAGAATCTTAGAAAGAATTGGGACCGTGGCATACAAGCTGGAACTACCGAGCAA
TGCAGCCATTCATCCGGTGTTCCATGTCTCTCAGCTTAAGAAAGCAATAGGGAACATCAAGGAAGTCCAATCCCTTGATCCATTTGTCAACGAATGTCATGAGTGGATCA
CTCAACCGGAGGAAATCTATGCTTATCGAAAGAATCAGACTACAAAGGAATGGGAAGCGCTAGTACAATGGAAGGGACTGCCCCCGCACGAAGCCACCTGGGAAAATTAT
GCTGATTTGAAGGTACAATTCCCTGAGTTCCACCTTGAGGACAAGGTGGATTTAGAGGAGGAGAGTGATGCTAGACCTCCAATTTTATTTACCTACAACAGTTGTGAGAA
CCTTTTCTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHLYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLKC
FCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGALKEHLRVAQERMKKFADLKRRDVEFQTGDFVFLKLRPYRQ
TSLRKKRNEKLSPKYFGPYRILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQSLDPFVNECHEWITQPEEIYAYRKNQTTKEWEALVQWKGLPPHEATWENY
ADLKVQFPEFHLEDKVDLEEESDARPPILFTYNSCENLF

Pay0015743 (gene) of Melon (Payzawat) v1 genome