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Pay0015879 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0015879
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr10:7744499..7746417
RNA-Seq ExpressionPay0015879
SyntenyPay0015879
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039309.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.7e-0635.56Show/hide
Query:  EVTSALKSTIIINKGKSTLS-KKDKLTSKAINEDKPHFDFKSDKKQRLNGERYINKKSPAKQYRVKSPTNLG-LNIQSLQIITGIIEAEKHSLNLIVDLG
        ++ S L S  I  K K  +S       +   N D    +   +KK+R++ ER + KKS   Q ++++    G L  Q LQ++   ++A K  L+L VDLG
Subjt:  EVTSALKSTIIINKGKSTLS-KKDKLTSKAINEDKPHFDFKSDKKQRLNGERYINKKSPAKQYRVKSPTNLG-LNIQSLQIITGIIEAEKHSLNLIVDLG

Query:  NIPPMDNQHRSDDNFNSDYAEEIDHTNT-IVLETP
        N+P +D     +D+ +SD AE ID TNT +V ETP
Subjt:  NIPPMDNQHRSDDNFNSDYAEEIDHTNT-IVLETP

KAA0051643.1 hypothetical protein E6C27_scaffold60G00080 [Cucumis melo var. makuwa]4.4e-0743.01Show/hide
Query:  DKKQRLNGERYINKKSPAKQYRVKSPTNLG-LNIQSLQIITGIIEAEKHSLNLIVDLGNIPPMDNQHRSDDNFNSDYAEEIDHTNT-IVLETP
        +KKQ+++ ER I KKS + QY++K+    G LN+Q +Q++   +EA K  L+L VDL ++  +D     +D+ +SD AE ID TNT +V ETP
Subjt:  DKKQRLNGERYINKKSPAKQYRVKSPTNLG-LNIQSLQIITGIIEAEKHSLNLIVDLGNIPPMDNQHRSDDNFNSDYAEEIDHTNT-IVLETP

TYJ97964.1 hypothetical protein E5676_scaffold234G00680 [Cucumis melo var. makuwa]4.4e-0743.01Show/hide
Query:  DKKQRLNGERYINKKSPAKQYRVKSPTNLG-LNIQSLQIITGIIEAEKHSLNLIVDLGNIPPMDNQHRSDDNFNSDYAEEIDHTNT-IVLETP
        +KKQ+++ ER I KKS + QY++K+    G LN+Q +Q++   +EA K  L+L VDL ++  +D     +D+ +SD AE ID TNT +V ETP
Subjt:  DKKQRLNGERYINKKSPAKQYRVKSPTNLG-LNIQSLQIITGIIEAEKHSLNLIVDLGNIPPMDNQHRSDDNFNSDYAEEIDHTNT-IVLETP

TYJ99315.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.9e-0644.09Show/hide
Query:  DKKQRLNGERYINKKSPAKQYRVKSPTNLGLNI-QSLQIITGIIEAEKHSLNLIVDLGNIPPMDNQHRSDDNFNSDYAEEIDHTNT-IVLETP
        +KKQ+++ ER I KKS + Q   K+  N G+ I Q +QI+    +A K  L+L VDLG++P +D     +D+ NSD AE +D TNT +V ETP
Subjt:  DKKQRLNGERYINKKSPAKQYRVKSPTNLGLNI-QSLQIITGIIEAEKHSLNLIVDLGNIPPMDNQHRSDDNFNSDYAEEIDHTNT-IVLETP

TYK00493.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.7e-0635.56Show/hide
Query:  EVTSALKSTIIINKGKSTLS-KKDKLTSKAINEDKPHFDFKSDKKQRLNGERYINKKSPAKQYRVKSPTNLG-LNIQSLQIITGIIEAEKHSLNLIVDLG
        ++ S L S  I  K K  +S       +   N D    +   +KK+R++ ER + KKS   Q ++++    G L  Q LQ++   ++A K  L+L VDLG
Subjt:  EVTSALKSTIIINKGKSTLS-KKDKLTSKAINEDKPHFDFKSDKKQRLNGERYINKKSPAKQYRVKSPTNLG-LNIQSLQIITGIIEAEKHSLNLIVDLG

Query:  NIPPMDNQHRSDDNFNSDYAEEIDHTNT-IVLETP
        N+P +D     +D+ +SD AE ID TNT +V ETP
Subjt:  NIPPMDNQHRSDDNFNSDYAEEIDHTNT-IVLETP

TrEMBL top hitse value%identityAlignment
A0A5A7TDG1 LINE-1 retrotransposable element ORF2 protein1.8e-0635.56Show/hide
Query:  EVTSALKSTIIINKGKSTLS-KKDKLTSKAINEDKPHFDFKSDKKQRLNGERYINKKSPAKQYRVKSPTNLG-LNIQSLQIITGIIEAEKHSLNLIVDLG
        ++ S L S  I  K K  +S       +   N D    +   +KK+R++ ER + KKS   Q ++++    G L  Q LQ++   ++A K  L+L VDLG
Subjt:  EVTSALKSTIIINKGKSTLS-KKDKLTSKAINEDKPHFDFKSDKKQRLNGERYINKKSPAKQYRVKSPTNLG-LNIQSLQIITGIIEAEKHSLNLIVDLG

Query:  NIPPMDNQHRSDDNFNSDYAEEIDHTNT-IVLETP
        N+P +D     +D+ +SD AE ID TNT +V ETP
Subjt:  NIPPMDNQHRSDDNFNSDYAEEIDHTNT-IVLETP

A0A5A7U6V7 Uncharacterized protein2.1e-0743.01Show/hide
Query:  DKKQRLNGERYINKKSPAKQYRVKSPTNLG-LNIQSLQIITGIIEAEKHSLNLIVDLGNIPPMDNQHRSDDNFNSDYAEEIDHTNT-IVLETP
        +KKQ+++ ER I KKS + QY++K+    G LN+Q +Q++   +EA K  L+L VDL ++  +D     +D+ +SD AE ID TNT +V ETP
Subjt:  DKKQRLNGERYINKKSPAKQYRVKSPTNLG-LNIQSLQIITGIIEAEKHSLNLIVDLGNIPPMDNQHRSDDNFNSDYAEEIDHTNT-IVLETP

A0A5D3BFW3 Uncharacterized protein2.1e-0743.01Show/hide
Query:  DKKQRLNGERYINKKSPAKQYRVKSPTNLG-LNIQSLQIITGIIEAEKHSLNLIVDLGNIPPMDNQHRSDDNFNSDYAEEIDHTNT-IVLETP
        +KKQ+++ ER I KKS + QY++K+    G LN+Q +Q++   +EA K  L+L VDL ++  +D     +D+ +SD AE ID TNT +V ETP
Subjt:  DKKQRLNGERYINKKSPAKQYRVKSPTNLG-LNIQSLQIITGIIEAEKHSLNLIVDLGNIPPMDNQHRSDDNFNSDYAEEIDHTNT-IVLETP

A0A5D3BL61 LINE-1 retrotransposable element ORF2 protein1.8e-0635.56Show/hide
Query:  EVTSALKSTIIINKGKSTLS-KKDKLTSKAINEDKPHFDFKSDKKQRLNGERYINKKSPAKQYRVKSPTNLG-LNIQSLQIITGIIEAEKHSLNLIVDLG
        ++ S L S  I  K K  +S       +   N D    +   +KK+R++ ER + KKS   Q ++++    G L  Q LQ++   ++A K  L+L VDLG
Subjt:  EVTSALKSTIIINKGKSTLS-KKDKLTSKAINEDKPHFDFKSDKKQRLNGERYINKKSPAKQYRVKSPTNLG-LNIQSLQIITGIIEAEKHSLNLIVDLG

Query:  NIPPMDNQHRSDDNFNSDYAEEIDHTNT-IVLETP
        N+P +D     +D+ +SD AE ID TNT +V ETP
Subjt:  NIPPMDNQHRSDDNFNSDYAEEIDHTNT-IVLETP

A0A5D3BLV7 LINE-1 retrotransposable element ORF2 protein1.4e-0644.09Show/hide
Query:  DKKQRLNGERYINKKSPAKQYRVKSPTNLGLNI-QSLQIITGIIEAEKHSLNLIVDLGNIPPMDNQHRSDDNFNSDYAEEIDHTNT-IVLETP
        +KKQ+++ ER I KKS + Q   K+  N G+ I Q +QI+    +A K  L+L VDLG++P +D     +D+ NSD AE +D TNT +V ETP
Subjt:  DKKQRLNGERYINKKSPAKQYRVKSPTNLGLNI-QSLQIITGIIEAEKHSLNLIVDLGNIPPMDNQHRSDDNFNSDYAEEIDHTNT-IVLETP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATTTTCAAAAATCTCCGAAGATCCTACAAGATTGAAAGAAAAGAATATGCAGTTTCCAACTTCGGCAAGAGTAATGACAGGCATGGTGAAGTGACATCAGCATT
AAAGTCCACTATTATTATTAATAAAGGCAAATCCACTCTCTCCAAGAAAGATAAGTTGACATCCAAAGCCATTAATGAAGACAAGCCCCACTTTGACTTCAAATCAGATA
AAAAACAAAGACTCAATGGAGAGAGATACATCAATAAAAAATCACCAGCTAAGCAATACCGTGTGAAATCACCAACAAATCTTGGATTAAATATACAGTCGTTGCAAATC
ATTACAGGAATAATTGAAGCTGAGAAACATAGTTTGAACCTTATAGTTGATCTAGGCAACATTCCACCAATGGACAACCAACACCGAAGTGATGACAACTTCAACTCAGA
CTATGCAGAAGAGATTGATCATACTAATACTATTGTTCTGGAAACACCATCAAAATTGTCTCATTTGTTGACAACAAGGGCCCAAAATGTGGATTTCTTAGAAGAAAAAG
GGGTAAAACTCAGAGAGCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATTTTCAAAAATCTCCGAAGATCCTACAAGATTGAAAGAAAAGAATATGCAGTTTCCAACTTCGGCAAGAGTAATGACAGGCATGGTGAAGTGACATCAGCATT
AAAGTCCACTATTATTATTAATAAAGGCAAATCCACTCTCTCCAAGAAAGATAAGTTGACATCCAAAGCCATTAATGAAGACAAGCCCCACTTTGACTTCAAATCAGATA
AAAAACAAAGACTCAATGGAGAGAGATACATCAATAAAAAATCACCAGCTAAGCAATACCGTGTGAAATCACCAACAAATCTTGGATTAAATATACAGTCGTTGCAAATC
ATTACAGGAATAATTGAAGCTGAGAAACATAGTTTGAACCTTATAGTTGATCTAGGCAACATTCCACCAATGGACAACCAACACCGAAGTGATGACAACTTCAACTCAGA
CTATGCAGAAGAGATTGATCATACTAATACTATTGTTCTGGAAACACCATCAAAATTGTCTCATTTGTTGACAACAAGGGCCCAAAATGTGGATTTCTTAGAAGAAAAAG
GGGTAAAACTCAGAGAGCTTTAA
Protein sequenceShow/hide protein sequence
MEIFKNLRRSYKIERKEYAVSNFGKSNDRHGEVTSALKSTIIINKGKSTLSKKDKLTSKAINEDKPHFDFKSDKKQRLNGERYINKKSPAKQYRVKSPTNLGLNIQSLQI
ITGIIEAEKHSLNLIVDLGNIPPMDNQHRSDDNFNSDYAEEIDHTNTIVLETPSKLSHLLTTRAQNVDFLEEKGVKLREL