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Pay0015938 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0015938
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr08:11949954..11950301
RNA-Seq ExpressionPay0015938
SyntenyPay0015938
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049980.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]9.4e-4585.32Show/hide
Query:  MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL
        MAKAL NRLK TL D VAENQMAFIKGRQITDAILIANE ID+WK++KTKGFVLKLDIE+ FDKISW FI+FMLAKKNFPIKWRKW+NAYI+NVQYSILL
Subjt:  MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL

Query:  NGNPKGRIK
         G PKGRIK
Subjt:  NGNPKGRIK
KAA0056839.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.6e-4480.87Show/hide
Query:  MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL
        MAKALANRLK  L D +AENQMAFIKGRQI DAILIANE ID+WKQ+K KGFVLKLD+E+AFDKISW FI+FMLAKK+FP KWRKW+ A I+NVQYSILL
Subjt:  MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL

Query:  NGNPKGRIKVERGIR
        NG PKGRIK ERGIR
Subjt:  NGNPKGRIKVERGIR
KAA0057507.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.1e-4480.87Show/hide
Query:  MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL
        MAKALANRLK  L D +AENQMAFIKGRQI DAILIANE ID+WKQ+K KGFVLKLDIE+AFDKISW FI++MLAKK+FP KWRKW+ A I+NVQYSILL
Subjt:  MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL

Query:  NGNPKGRIKVERGIR
        NG PKGRIK ERGIR
Subjt:  NGNPKGRIKVERGIR
TYK04226.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.0e-4681.74Show/hide
Query:  MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL
        MAKALANRLK TL D VAENQM FIKGRQI++AILIANE ID+WKQ+KTKGFVLKLDIE+A DKISW FI+FMLAKKNFPIKWRKW+NA I+N+QY IL+
Subjt:  MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL

Query:  NGNPKGRIKVERGIR
        NG PKGRIK ERGIR
Subjt:  NGNPKGRIKVERGIR
XP_016901812.1 PREDICTED: uncharacterized protein LOC107991418 [Cucumis melo]6.3e-57100Show/hide
Query:  MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL
        MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL
Subjt:  MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL

Query:  NGNPKGRIKVERGIR
        NGNPKGRIKVERGIR
Subjt:  NGNPKGRIKVERGIR
TrEMBL top hitse value%identityAlignment
A0A1S4E0P4 uncharacterized protein LOC1079914183.0e-57100Show/hide
Query:  MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL
        MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL
Subjt:  MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL

Query:  NGNPKGRIKVERGIR
        NGNPKGRIKVERGIR
Subjt:  NGNPKGRIKVERGIR
A0A5A7U3W9 LINE-1 retrotransposable element ORF2 protein4.6e-4585.32Show/hide
Query:  MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL
        MAKAL NRLK TL D VAENQMAFIKGRQITDAILIANE ID+WK++KTKGFVLKLDIE+ FDKISW FI+FMLAKKNFPIKWRKW+NAYI+NVQYSILL
Subjt:  MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL

Query:  NGNPKGRIK
         G PKGRIK
Subjt:  NGNPKGRIK
A0A5A7UTI6 LINE-1 retrotransposable element ORF2 protein7.8e-4580.87Show/hide
Query:  MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL
        MAKALANRLK  L D +AENQMAFIKGRQI DAILIANE ID+WKQ+K KGFVLKLD+E+AFDKISW FI+FMLAKK+FP KWRKW+ A I+NVQYSILL
Subjt:  MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL

Query:  NGNPKGRIKVERGIR
        NG PKGRIK ERGIR
Subjt:  NGNPKGRIKVERGIR
A0A5D3BWG4 LINE-1 retrotransposable element ORF2 protein3.0e-57100Show/hide
Query:  MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL
        MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL
Subjt:  MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL

Query:  NGNPKGRIKVERGIR
        NGNPKGRIKVERGIR
Subjt:  NGNPKGRIKVERGIR
A0A5D3C1E5 LINE-1 retrotransposable element ORF2 protein2.4e-4681.74Show/hide
Query:  MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL
        MAKALANRLK TL D VAENQM FIKGRQI++AILIANE ID+WKQ+KTKGFVLKLDIE+A DKISW FI+FMLAKKNFPIKWRKW+NA I+N+QY IL+
Subjt:  MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILL

Query:  NGNPKGRIKVERGIR
        NG PKGRIK ERGIR
Subjt:  NGNPKGRIKVERGIR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G20520.1 RNA binding;RNA-directed DNA polymerases1.2e-0837.04Show/hide
Query:  LANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKK-TKGF-VLKLDIEEAFDKISWRFINFMLAKKNFPIKW
        +  RLK  + +++   Q +FI GR  TD I+   E + S ++KK  KG+ +LKLD+E+A+D+I W ++   L    FP  W
Subjt:  LANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKK-TKGF-VLKLDIEEAFDKISWRFINFMLAKKNFPIKW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAGCTTTAGCAAATAGACTCAAAGTCACCCTAGCTGATATTGTTGCTGAAAATCAAATGGCTTTCATTAAAGGAAGACAAATTACCGATGCAATTCTCATTGC
AAATGAAGAAATTGACTCGTGGAAGCAAAAGAAAACAAAAGGCTTTGTCCTAAAGCTAGACATAGAAGAGGCGTTTGATAAAATCAGCTGGAGATTCATCAACTTCATGC
TTGCAAAGAAAAACTTTCCCATCAAATGGAGAAAATGGGTTAATGCATATATCAACAATGTTCAATATTCTATCCTTCTAAATGGGAATCCAAAAGGAAGAATAAAAGTG
GAAAGAGGCATAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAAGCTTTAGCAAATAGACTCAAAGTCACCCTAGCTGATATTGTTGCTGAAAATCAAATGGCTTTCATTAAAGGAAGACAAATTACCGATGCAATTCTCATTGC
AAATGAAGAAATTGACTCGTGGAAGCAAAAGAAAACAAAAGGCTTTGTCCTAAAGCTAGACATAGAAGAGGCGTTTGATAAAATCAGCTGGAGATTCATCAACTTCATGC
TTGCAAAGAAAAACTTTCCCATCAAATGGAGAAAATGGGTTAATGCATATATCAACAATGTTCAATATTCTATCCTTCTAAATGGGAATCCAAAAGGAAGAATAAAAGTG
GAAAGAGGCATAAGATAG
Protein sequenceShow/hide protein sequence
MAKALANRLKVTLADIVAENQMAFIKGRQITDAILIANEEIDSWKQKKTKGFVLKLDIEEAFDKISWRFINFMLAKKNFPIKWRKWVNAYINNVQYSILLNGNPKGRIKV
ERGIR