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Pay0016078 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0016078
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr04:18309715..18310299
RNA-Seq ExpressionPay0016078
SyntenyPay0016078
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058511.1 uncharacterized protein E6C27_scaffold132G001040 [Cucumis melo var. makuwa]1.4e-2491.78Show/hide
Query:  MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIMENILRSMTSKFNFVEIEDEE
        MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIME ILRSM+SKFNFV    EE
Subjt:  MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIMENILRSMTSKFNFVEIEDEE

KAE8647019.1 hypothetical protein Csa_017017 [Cucumis sativus]3.1e-2175.64Show/hide
Query:  MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIMENILRSMTSKFNFVEIEDEEDDDLK
        +KAKRVQLQGLRT+FETLRMK SESVIDFFA+TM+IANKM+IHGEK+EDV I+E ILRSMT KFNFV    EE  D++
Subjt:  MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIMENILRSMTSKFNFVEIEDEEDDDLK

TYK11771.1 uncharacterized protein E5676_scaffold304G00980 [Cucumis melo var. makuwa]3.3e-3967.95Show/hide
Query:  MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIMENILRSM-------------TSKF---------NFVEIEDEEDDDLK
        +KAK VQLQGLR EFETLRMKTSESVIDFFA+TMTIANKM+IHGEK+EDV IME ILR++              SK+         +  EI+DEED DLK
Subjt:  MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIMENILRSM-------------TSKF---------NFVEIEDEEDDDLK

Query:  AEEATIVAANKDTINTKRINFKEEEKEEERKEETITQQLTSQQKNHILNATDAINM
        AEEATIVAANKDT++TKRINF    KEEERKEE ITQQLTSQQ +HILNATDAI +
Subjt:  AEEATIVAANKDTINTKRINFKEEEKEEERKEETITQQLTSQQKNHILNATDAINM

XP_008464977.1 PREDICTED: uncharacterized protein LOC103502717 [Cucumis melo]7.0e-2159.13Show/hide
Query:  MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIMENILRSMTSKFNFVEIEDEEDDDLKAEEATIVAANKDTINTKRINFK
        +KAKRVQLQGLRT+FETLRMKTSESVIDFFA+TMTIANKM+IHGEKMEDV I++ ILRSMT KFNFV    EE  D+  +  +I       +  ++   K
Subjt:  MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIMENILRSMTSKFNFVEIEDEEDDDLKAEEATIVAANKDTINTKRINFK

Query:  EEEKEEERKEETITQ
        +E++E+  K  T  Q
Subjt:  EEEKEEERKEETITQ

XP_016903121.1 PREDICTED: uncharacterized protein LOC107992041 [Cucumis melo]1.6e-6295.83Show/hide
Query:  MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIMENILRSMTSKFNFVEIEDEEDDDLKAEEATIVAANKDTINTKRINFK
        MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIME ILRSM+SKFNFVEIEDEED DLKAEEATIVAANKD INTKRINFK
Subjt:  MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIMENILRSMTSKFNFVEIEDEEDDDLKAEEATIVAANKDTINTKRINFK

Query:  EEEKEEERKEETITQQLTSQQKNHILNATDAINMAIINQNVEQI
        EEEKEEERKEETITQQLTSQQ +HILNATDAINMAIINQNVEQI
Subjt:  EEEKEEERKEETITQQLTSQQKNHILNATDAINMAIINQNVEQI

TrEMBL top hitse value%identityAlignment
A0A1S3CMQ7 uncharacterized protein LOC1035027173.4e-2159.13Show/hide
Query:  MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIMENILRSMTSKFNFVEIEDEEDDDLKAEEATIVAANKDTINTKRINFK
        +KAKRVQLQGLRT+FETLRMKTSESVIDFFA+TMTIANKM+IHGEKMEDV I++ ILRSMT KFNFV    EE  D+  +  +I       +  ++   K
Subjt:  MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIMENILRSMTSKFNFVEIEDEEDDDLKAEEATIVAANKDTINTKRINFK

Query:  EEEKEEERKEETITQ
        +E++E+  K  T  Q
Subjt:  EEEKEEERKEETITQ

A0A1S4E4G0 uncharacterized protein LOC1079920417.9e-6395.83Show/hide
Query:  MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIMENILRSMTSKFNFVEIEDEEDDDLKAEEATIVAANKDTINTKRINFK
        MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIME ILRSM+SKFNFVEIEDEED DLKAEEATIVAANKD INTKRINFK
Subjt:  MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIMENILRSMTSKFNFVEIEDEEDDDLKAEEATIVAANKDTINTKRINFK

Query:  EEEKEEERKEETITQQLTSQQKNHILNATDAINMAIINQNVEQI
        EEEKEEERKEETITQQLTSQQ +HILNATDAINMAIINQNVEQI
Subjt:  EEEKEEERKEETITQQLTSQQKNHILNATDAINMAIINQNVEQI

A0A5A7UUP0 Uncharacterized protein3.4e-2159.13Show/hide
Query:  MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIMENILRSMTSKFNFVEIEDEEDDDLKAEEATIVAANKDTINTKRINFK
        +KAKRVQLQGLRT+FETLRMKTSESVIDFFA+TMTIANKM+IHGEKMEDV I++ ILRSMT KFNFV    EE  D+  +  +I       +  ++   K
Subjt:  MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIMENILRSMTSKFNFVEIEDEEDDDLKAEEATIVAANKDTINTKRINFK

Query:  EEEKEEERKEETITQ
        +E++E+  K  T  Q
Subjt:  EEEKEEERKEETITQ

A0A5A7UYE7 Uncharacterized protein6.6e-2591.78Show/hide
Query:  MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIMENILRSMTSKFNFVEIEDEE
        MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIME ILRSM+SKFNFV    EE
Subjt:  MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIMENILRSMTSKFNFVEIEDEE

A0A5D3CIW6 DUF4216 domain-containing protein1.6e-3967.95Show/hide
Query:  MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIMENILRSM-------------TSKF---------NFVEIEDEEDDDLK
        +KAK VQLQGLR EFETLRMKTSESVIDFFA+TMTIANKM+IHGEK+EDV IME ILR++              SK+         +  EI+DEED DLK
Subjt:  MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIMENILRSM-------------TSKF---------NFVEIEDEEDDDLK

Query:  AEEATIVAANKDTINTKRINFKEEEKEEERKEETITQQLTSQQKNHILNATDAINM
        AEEATIVAANKDT++TKRINF    KEEERKEE ITQQLTSQQ +HILNATDAI +
Subjt:  AEEATIVAANKDTINTKRINFKEEEKEEERKEETITQQLTSQQKNHILNATDAINM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCAAAGCGGGTGCAGCTTCAAGGTCTTCGAACCGAATTCGAGACTCTACGAATGAAGACGAGTGAGTCGGTGATTGATTTCTTTGCAAAAACAATGACAATCGC
CAACAAAATGCAGATCCATGGAGAAAAAATGGAAGACGTCGCCATTATGGAAAATATTCTTCGATCAATGACATCGAAGTTTAATTTCGTTGAGATAGAGGATGAGGAAG
ATGACGATTTAAAGGCAGAAGAAGCAACAATCGTGGCAGCAAACAAAGACACCATCAATACTAAGAGAATCAATTTCAAGGAAGAGGAAAAGGAAGAGGAAAGGAAAGAG
GAGACCATCACACAACAACTTACAAGCCAACAAAAAAATCACATATTGAATGCCACCGATGCCATAAATATGGCCATTATCAATCAGAATGTCGAACAAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCAAAGCGGGTGCAGCTTCAAGGTCTTCGAACCGAATTCGAGACTCTACGAATGAAGACGAGTGAGTCGGTGATTGATTTCTTTGCAAAAACAATGACAATCGC
CAACAAAATGCAGATCCATGGAGAAAAAATGGAAGACGTCGCCATTATGGAAAATATTCTTCGATCAATGACATCGAAGTTTAATTTCGTTGAGATAGAGGATGAGGAAG
ATGACGATTTAAAGGCAGAAGAAGCAACAATCGTGGCAGCAAACAAAGACACCATCAATACTAAGAGAATCAATTTCAAGGAAGAGGAAAAGGAAGAGGAAAGGAAAGAG
GAGACCATCACACAACAACTTACAAGCCAACAAAAAAATCACATATTGAATGCCACCGATGCCATAAATATGGCCATTATCAATCAGAATGTCGAACAAATTTGA
Protein sequenceShow/hide protein sequence
MKAKRVQLQGLRTEFETLRMKTSESVIDFFAKTMTIANKMQIHGEKMEDVAIMENILRSMTSKFNFVEIEDEEDDDLKAEEATIVAANKDTINTKRINFKEEEKEEERKE
ETITQQLTSQQKNHILNATDAINMAIINQNVEQI