; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0016084 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0016084
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationchr07:27549130..27549987
RNA-Seq ExpressionPay0016084
SyntenyPay0016084
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044541.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]7.3e-147100Show/hide
Query:  MIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKQRKDGIPSAEFRHAFLPIF
        MIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKQRKDGIPSAEFRHAFLPIF
Subjt:  MIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKQRKDGIPSAEFRHAFLPIF

Query:  FSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGLKRLVELLNVNDTIFNGGSDSLLIALAYAKMKKT
        FSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGLKRLVELLNVNDTIFNGGSDSLLIALAYAKMKKT
Subjt:  FSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGLKRLVELLNVNDTIFNGGSDSLLIALAYAKMKKT

Query:  LKFSPKITDGFLYGFHYRIQGYRTFCYPITYYPNSLSFQNFQQSNNHRIILPKLIVFP
        LKFSPKITDGFLYGFHYRIQGYRTFCYPITYYPNSLSFQNFQQSNNHRIILPKLIVFP
Subjt:  LKFSPKITDGFLYGFHYRIQGYRTFCYPITYYPNSLSFQNFQQSNNHRIILPKLIVFP

KAA0044544.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]4.4e-13690.41Show/hide
Query:  MSFVRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVRQVWYHNLTQEL ILND+LFKFP+IAMDTEFP FLRST RGAPEEH YQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKN------KKQRKDGIPSAEFRHAFLPIFFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGL
        IQYLKN      KKQRKDGIPSAEFR AFLPIF SN+ITKWITFHGI+DVAYLLKLMMIRTMP+SMVEFAIIAQ HLGTVNDLKH+IRNCE+LMNGELGL
Subjt:  IQYLKN------KKQRKDGIPSAEFRHAFLPIFFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGL

Query:  KRLVELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSPKITDGFLYGFHYRIQGYRTFCYPITYYPNSLSF
        KRL ELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFS +ITDGFLYGFHYRI+GYRTFCY ITYYPNSL F
Subjt:  KRLVELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSPKITDGFLYGFHYRIQGYRTFCYPITYYPNSLSF

XP_004151393.1 putative CCR4-associated factor 1 homolog 8 [Cucumis sativus]1.3e-11481.78Show/hide
Query:  FVRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQ
        FVRQVWYHNL QEL ILND LFKFP+I MDTEFP FLRST RGAP+EHLYQDLKFN+NHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTD SSPTS+Q
Subjt:  FVRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQ

Query:  YLKN------KKQRKDGIPSAEFRHAFLPIFFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGLKR
        YLKN      KKQRKDGIPSAEFR AFLPIF SN+ITKWITFHGI+DVAYLLKLM+I+ MP+SMVEFAIIAQ  LGTVNDLK++I +CE LM GELGLKR
Subjt:  YLKN------KKQRKDGIPSAEFRHAFLPIFFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGLKR

Query:  LVELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSPKITDGFLYGFHYRIQGYRTFCY
        L ELL+VNDT+F+GGSDSLLIALAY KMKK LK S + T GFLYGF YRI+GY+TFCY
Subjt:  LVELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSPKITDGFLYGFHYRIQGYRTFCY

XP_008454486.1 PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo]7.1e-13488.93Show/hide
Query:  MSFVRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVR+VWYHN  QEL ILND+LFKFP+IAMDTEFP FLRST RGAPEEH YQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKN------KKQRKDGIPSAEFRHAFLPIFFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGL
        IQYLKN      KKQRKDGIPSAEFR AFLPIF SN+ITKWITFHGI+DVAYLLKLMMIRTMP+SMVEFAIIAQ HLGTVNDLKH+IRNCE+LMNGELGL
Subjt:  IQYLKN------KKQRKDGIPSAEFRHAFLPIFFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGL

Query:  KRLVELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSPKITDGFLYGFHYRIQGYRTFCYPITYYPNSLSF
        KRL ELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFS +ITDGFLYGF+YRI+GYRTFCY ITYYPNSL F
Subjt:  KRLVELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSPKITDGFLYGFHYRIQGYRTFCYPITYYPNSLSF

XP_008466654.1 PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo]1.0e-10886.86Show/hide
Query:  MSFVRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVRQVWYHNLTQEL ILND+LFK PMI MDTEF  FLRST RGAPEEHLYQDLKFNLNHLKILQLGLTLMD+NEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKN------KKQRKDGIPSAEFRHAFLPIFFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGL
        IQYLKN      KK RK  IPSAEFR AFLPIF SN+ITKWITFHGI+DVAYLLKLMMIRTMP+SMVEFA IAQ  LGTVNDLKH+I NCEHLMNGELGL
Subjt:  IQYLKN------KKQRKDGIPSAEFRHAFLPIFFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGL

Query:  KRLVELLNVNDTIFNGGSDSLLIALAYAKMKKTLKF
        KRL ELLNVNDTIFNGGSDSLLIALAY KMKK LK+
Subjt:  KRLVELLNVNDTIFNGGSDSLLIALAYAKMKKTLKF

TrEMBL top hitse value%identityAlignment
A0A0A0KTU4 Poly(A)-specific ribonuclease6.1e-11581.78Show/hide
Query:  FVRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQ
        FVRQVWYHNL QEL ILND LFKFP+I MDTEFP FLRST RGAP+EHLYQDLKFN+NHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTD SSPTS+Q
Subjt:  FVRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQ

Query:  YLKN------KKQRKDGIPSAEFRHAFLPIFFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGLKR
        YLKN      KKQRKDGIPSAEFR AFLPIF SN+ITKWITFHGI+DVAYLLKLM+I+ MP+SMVEFAIIAQ  LGTVNDLK++I +CE LM GELGLKR
Subjt:  YLKN------KKQRKDGIPSAEFRHAFLPIFFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGLKR

Query:  LVELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSPKITDGFLYGFHYRIQGYRTFCY
        L ELL+VNDT+F+GGSDSLLIALAY KMKK LK S + T GFLYGF YRI+GY+TFCY
Subjt:  LVELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSPKITDGFLYGFHYRIQGYRTFCY

A0A1S3BY95 Poly(A)-specific ribonuclease3.4e-13488.93Show/hide
Query:  MSFVRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVR+VWYHN  QEL ILND+LFKFP+IAMDTEFP FLRST RGAPEEH YQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKN------KKQRKDGIPSAEFRHAFLPIFFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGL
        IQYLKN      KKQRKDGIPSAEFR AFLPIF SN+ITKWITFHGI+DVAYLLKLMMIRTMP+SMVEFAIIAQ HLGTVNDLKH+IRNCE+LMNGELGL
Subjt:  IQYLKN------KKQRKDGIPSAEFRHAFLPIFFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGL

Query:  KRLVELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSPKITDGFLYGFHYRIQGYRTFCYPITYYPNSLSF
        KRL ELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFS +ITDGFLYGF+YRI+GYRTFCY ITYYPNSL F
Subjt:  KRLVELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSPKITDGFLYGFHYRIQGYRTFCYPITYYPNSLSF

A0A5A7TN62 Poly(A)-specific ribonuclease2.1e-13690.41Show/hide
Query:  MSFVRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVRQVWYHNLTQEL ILND+LFKFP+IAMDTEFP FLRST RGAPEEH YQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKN------KKQRKDGIPSAEFRHAFLPIFFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGL
        IQYLKN      KKQRKDGIPSAEFR AFLPIF SN+ITKWITFHGI+DVAYLLKLMMIRTMP+SMVEFAIIAQ HLGTVNDLKH+IRNCE+LMNGELGL
Subjt:  IQYLKN------KKQRKDGIPSAEFRHAFLPIFFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGL

Query:  KRLVELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSPKITDGFLYGFHYRIQGYRTFCYPITYYPNSLSF
        KRL ELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFS +ITDGFLYGFHYRI+GYRTFCY ITYYPNSL F
Subjt:  KRLVELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSPKITDGFLYGFHYRIQGYRTFCYPITYYPNSLSF

A0A5A7TSL5 Putative CCR4-associated factor 1-like protein 83.5e-147100Show/hide
Query:  MIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKQRKDGIPSAEFRHAFLPIF
        MIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKQRKDGIPSAEFRHAFLPIF
Subjt:  MIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKQRKDGIPSAEFRHAFLPIF

Query:  FSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGLKRLVELLNVNDTIFNGGSDSLLIALAYAKMKKT
        FSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGLKRLVELLNVNDTIFNGGSDSLLIALAYAKMKKT
Subjt:  FSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGLKRLVELLNVNDTIFNGGSDSLLIALAYAKMKKT

Query:  LKFSPKITDGFLYGFHYRIQGYRTFCYPITYYPNSLSFQNFQQSNNHRIILPKLIVFP
        LKFSPKITDGFLYGFHYRIQGYRTFCYPITYYPNSLSFQNFQQSNNHRIILPKLIVFP
Subjt:  LKFSPKITDGFLYGFHYRIQGYRTFCYPITYYPNSLSFQNFQQSNNHRIILPKLIVFP

A0A5D3D333 Poly(A)-specific ribonuclease3.4e-13488.93Show/hide
Query:  MSFVRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVR+VWYHN  QEL ILND+LFKFP+IAMDTEFP FLRST RGAPEEH YQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKN------KKQRKDGIPSAEFRHAFLPIFFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGL
        IQYLKN      KKQRKDGIPSAEFR AFLPIF SN+ITKWITFHGI+DVAYLLKLMMIRTMP+SMVEFAIIAQ HLGTVNDLKH+IRNCE+LMNGELGL
Subjt:  IQYLKN------KKQRKDGIPSAEFRHAFLPIFFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGL

Query:  KRLVELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSPKITDGFLYGFHYRIQGYRTFCYPITYYPNSLSF
        KRL ELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFS +ITDGFLYGF+YRI+GYRTFCY ITYYPNSL F
Subjt:  KRLVELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSPKITDGFLYGFHYRIQGYRTFCYPITYYPNSLSF

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 115.4e-2832.93Show/hide
Query:  VRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFLRSTS-----RGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHV---------GLSWVFTFSDF
        +R VW +NL  E  ++   +  +P I+MDTEFP  +         RG P  +LY  LK N++ L ++Q+GLTL D + ++            W F F DF
Subjt:  VRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFLRSTS-----RGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHV---------GLSWVFTFSDF

Query:  DEQTDFSSPTSIQYLKN-----KKQRKDGIPSAEFRHAFLPI-FFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLG-TVNDLKHIIR
        D + D  +P SI+ L+      ++ R++G+ S  F    +      N+   W+TFH  +D  YL+K++  R +P ++ EF  + +   G  V D+KHI+R
Subjt:  DEQTDFSSPTSIQYLKN-----KKQRKDGIPSAEFRHAFLPI-FFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLG-TVNDLKHIIR

Query:  NCEHLMNGELGLKRLVELLNVNDTI---FNGGSDSLLIALAYAKMK
         CE  + G  GL R+   L VN  +      GSDSLL   A+ +M+
Subjt:  NCEHLMNGELGLKRLVELLNVNDTI---FNGGSDSLLIALAYAKMK

Q9LXM2 Probable CCR4-associated factor 1 homolog 97.6e-3033.2Show/hide
Query:  RQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFL-RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENE---------HVGLSWVFTFSDFDEQTD
        R+VW  NL  E  ++++ +  +P I+MDTEFP  + +S  R    + LY  LK N++ L ++Q+GLTL D N          H G  W F F DFD   D
Subjt:  RQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFL-RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENE---------HVGLSWVFTFSDFDEQTD

Query:  FSSPTSIQYLKN-----KKQRKDGIPSAEFRHAFLPI-FFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLG-TVNDLKHIIRNCEHL
          +P SI+ L+      ++  +DG+ S  F    +      N+   W+TFH  +D  YL+K++  R +P ++ EF  + +   G  V D+KH+++ CE  
Subjt:  FSSPTSIQYLKN-----KKQRKDGIPSAEFRHAFLPI-FFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLG-TVNDLKHIIRNCEHL

Query:  MNGELGLKRLVELLNVNDTI---FNGGSDSLLIALAYAKMKKT--LKFSPKITDGFLYG
        + G  GL R+   L VN  +      GSDSLL   A+ +M+    ++  P+   G LYG
Subjt:  MNGELGLKRLVELLNVNDTI---FNGGSDSLLIALAYAKMKKT--LKFSPKITDGFLYG

Q9S9P2 Probable CCR4-associated factor 1 homolog 26.0e-2732.21Show/hide
Query:  VRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFLRSTSRGAPE--------EHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSD
        +R+VW HNL QE+ ++   +  FP +AMDTEFP  +  T    P         E+ Y  LK N+N LK++QLGLTL DE  ++          W F F +
Subjt:  VRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFLRSTSRGAPE--------EHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSD

Query:  FDEQTDFSSPTSIQYLKN-----KKQRKDGIPSAEFRHAFLPI-FFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIR
        F+  +D  +  SI+ L+      +K  + G+ +  F    +      N    W+TFH  +D  YLLKL+  + +P+ + +F    +     V D+K+++ 
Subjt:  FDEQTDFSSPTSIQYLKN-----KKQRKDGIPSAEFRHAFLPI-FFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIR

Query:  NCEHLMNGELGLKRLVELLNVN--DTIFNGGSDSLLIALAYAKMKK------TLKFSPKITDGFLYG
         C +L     GL+++ ELL V         GSDSLL    + KMK+       LK+S     GFL+G
Subjt:  NCEHLMNGELGLKRLVELLNVN--DTIFNGGSDSLLIALAYAKMKK------TLKFSPKITDGFLYG

Q9SAI2 Probable CCR4-associated factor 1 homolog 64.0e-3134.63Show/hide
Query:  VRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFL---RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT
        +R+VW  NL +E+ ++ D +  FP +AMDTEFP  +     T +   + H Y+ LK N+N LK++QLGLT  +E  ++          W F F +FD  +
Subjt:  VRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFL---RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT

Query:  DFSSPTSIQYLKNK-----KQRKDGIPSAEFRHAFLPI-FFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHL
        D  +  SI+ LK       K   DGI S  F    +      N+   W+TFH  +D  YLLKL+  + +PDS  +F  +   +  TV D+KH+++ C  L
Subjt:  DFSSPTSIQYLKNK-----KQRKDGIPSAEFRHAFLPI-FFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHL

Query:  MNGELGLKRLVELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKFSP-KITDGFLYG
             GL +L ELL V         GSDSLL +  + K+K+     P     G LYG
Subjt:  MNGELGLKRLVELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKFSP-KITDGFLYG

Q9SKZ2 Probable CCR4-associated factor 1 homolog 74.2e-2832.56Show/hide
Query:  VRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFL---RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS--------WVFTFSDFDEQ
        +R+VW  NL  E+ ++ + +  FP +AMDTEFP  +     T +   E H Y+ LK N+N LK++QLGLT  DE  ++           W F F +FD +
Subjt:  VRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFL---RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS--------WVFTFSDFDEQ

Query:  TDFSSPTSIQYLKNK-----KQRKDGIPSAEFRHAFLPI-FFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEH
        +D  +  SI+ L+       K  + GI S  F    +      N+   W+TFH  +D  YLLKL+  + +P++   F  +   +   V D+KH+++ C  
Subjt:  TDFSSPTSIQYLKNK-----KQRKDGIPSAEFRHAFLPI-FFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEH

Query:  LMNGELGLKRLVELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKF-SPKITDGFLYG
        L     GL +L ELL+V         GSDSLL +  + K+++     S +   G LYG
Subjt:  LMNGELGLKRLVELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKF-SPKITDGFLYG

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-3234.63Show/hide
Query:  VRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFL---RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT
        +R+VW  NL +E+ ++ D +  FP +AMDTEFP  +     T +   + H Y+ LK N+N LK++QLGLT  +E  ++          W F F +FD  +
Subjt:  VRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFL---RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT

Query:  DFSSPTSIQYLKNK-----KQRKDGIPSAEFRHAFLPI-FFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHL
        D  +  SI+ LK       K   DGI S  F    +      N+   W+TFH  +D  YLLKL+  + +PDS  +F  +   +  TV D+KH+++ C  L
Subjt:  DFSSPTSIQYLKNK-----KQRKDGIPSAEFRHAFLPI-FFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHL

Query:  MNGELGLKRLVELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKFSP-KITDGFLYG
             GL +L ELL V         GSDSLL +  + K+K+     P     G LYG
Subjt:  MNGELGLKRLVELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKFSP-KITDGFLYG

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-3234.63Show/hide
Query:  VRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFL---RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT
        +R+VW  NL +E+ ++ D +  FP +AMDTEFP  +     T +   + H Y+ LK N+N LK++QLGLT  +E  ++          W F F +FD  +
Subjt:  VRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFL---RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT

Query:  DFSSPTSIQYLKNK-----KQRKDGIPSAEFRHAFLPI-FFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHL
        D  +  SI+ LK       K   DGI S  F    +      N+   W+TFH  +D  YLLKL+  + +PDS  +F  +   +  TV D+KH+++ C  L
Subjt:  DFSSPTSIQYLKNK-----KQRKDGIPSAEFRHAFLPI-FFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHL

Query:  MNGELGLKRLVELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKFSP-KITDGFLYG
             GL +L ELL V         GSDSLL +  + K+K+     P     G LYG
Subjt:  MNGELGLKRLVELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKFSP-KITDGFLYG

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-3234.63Show/hide
Query:  VRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFL---RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT
        +R+VW  NL +E+ ++ D +  FP +AMDTEFP  +     T +   + H Y+ LK N+N LK++QLGLT  +E  ++          W F F +FD  +
Subjt:  VRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFL---RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT

Query:  DFSSPTSIQYLKNK-----KQRKDGIPSAEFRHAFLPI-FFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHL
        D  +  SI+ LK       K   DGI S  F    +      N+   W+TFH  +D  YLLKL+  + +PDS  +F  +   +  TV D+KH+++ C  L
Subjt:  DFSSPTSIQYLKNK-----KQRKDGIPSAEFRHAFLPI-FFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHL

Query:  MNGELGLKRLVELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKFSP-KITDGFLYG
             GL +L ELL V         GSDSLL +  + K+K+     P     G LYG
Subjt:  MNGELGLKRLVELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKFSP-KITDGFLYG

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.0e-2932.56Show/hide
Query:  VRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFL---RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS--------WVFTFSDFDEQ
        +R+VW  NL  E+ ++ + +  FP +AMDTEFP  +     T +   E H Y+ LK N+N LK++QLGLT  DE  ++           W F F +FD +
Subjt:  VRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFL---RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS--------WVFTFSDFDEQ

Query:  TDFSSPTSIQYLKNK-----KQRKDGIPSAEFRHAFLPI-FFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEH
        +D  +  SI+ L+       K  + GI S  F    +      N+   W+TFH  +D  YLLKL+  + +P++   F  +   +   V D+KH+++ C  
Subjt:  TDFSSPTSIQYLKNK-----KQRKDGIPSAEFRHAFLPI-FFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEH

Query:  LMNGELGLKRLVELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKF-SPKITDGFLYG
        L     GL +L ELL+V         GSDSLL +  + K+++     S +   G LYG
Subjt:  LMNGELGLKRLVELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKF-SPKITDGFLYG

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.4e-3133.2Show/hide
Query:  RQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFL-RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENE---------HVGLSWVFTFSDFDEQTD
        R+VW  NL  E  ++++ +  +P I+MDTEFP  + +S  R    + LY  LK N++ L ++Q+GLTL D N          H G  W F F DFD   D
Subjt:  RQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFL-RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENE---------HVGLSWVFTFSDFDEQTD

Query:  FSSPTSIQYLKN-----KKQRKDGIPSAEFRHAFLPI-FFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLG-TVNDLKHIIRNCEHL
          +P SI+ L+      ++  +DG+ S  F    +      N+   W+TFH  +D  YL+K++  R +P ++ EF  + +   G  V D+KH+++ CE  
Subjt:  FSSPTSIQYLKN-----KKQRKDGIPSAEFRHAFLPI-FFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLG-TVNDLKHIIRNCEHL

Query:  MNGELGLKRLVELLNVNDTI---FNGGSDSLLIALAYAKMKKT--LKFSPKITDGFLYG
        + G  GL R+   L VN  +      GSDSLL   A+ +M+    ++  P+   G LYG
Subjt:  MNGELGLKRLVELLNVNDTI---FNGGSDSLLIALAYAKMKKT--LKFSPKITDGFLYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTCGTTCGACAAGTTTGGTATCATAATCTTACCCAAGAATTGACCATTCTCAACGATCGACTTTTCAAGTTTCCAATGATCGCGATGGACACTGAGTTTCCCGA
CTTTCTCCGATCAACTTCGAGAGGTGCTCCCGAGGAACATCTCTACCAAGATTTGAAGTTCAATCTAAACCATTTAAAAATTCTTCAACTGGGTCTCACTTTGATGGATG
AGAACGAGCATGTTGGGTTGTCTTGGGTGTTTACCTTTTCTGATTTTGATGAACAAACAGACTTCTCTAGTCCTACGTCAATCCAATATTTGAAAAACAAGAAACAGAGG
AAAGACGGAATTCCATCAGCTGAATTCCGACATGCATTTTTGCCGATCTTTTTTAGCAATCAAATAACTAAATGGATCACATTTCATGGCATTCACGATGTTGCTTATTT
GTTGAAGCTAATGATGATTAGAACCATGCCGGATTCCATGGTGGAATTCGCCATCATAGCTCAATGTCACCTTGGTACAGTCAACGACCTAAAACACATTATTCGCAATT
GTGAACACTTAATGAACGGTGAACTTGGACTTAAGAGACTTGTCGAGTTACTCAATGTGAACGACACTATTTTCAACGGTGGTTCTGATAGTTTGTTGATAGCTTTGGCG
TATGCAAAGATGAAGAAGACGCTCAAGTTTTCGCCAAAGATTACTGATGGGTTTTTATATGGTTTTCATTACAGAATTCAAGGATATAGAACCTTTTGCTATCCAATAAC
ATATTACCCAAACTCATTATCTTTCCAAAATTTTCAACAATCTAACAACCACAGGATCATATTACCCAAACTCATTGTCTTTCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTCGTTCGACAAGTTTGGTATCATAATCTTACCCAAGAATTGACCATTCTCAACGATCGACTTTTCAAGTTTCCAATGATCGCGATGGACACTGAGTTTCCCGA
CTTTCTCCGATCAACTTCGAGAGGTGCTCCCGAGGAACATCTCTACCAAGATTTGAAGTTCAATCTAAACCATTTAAAAATTCTTCAACTGGGTCTCACTTTGATGGATG
AGAACGAGCATGTTGGGTTGTCTTGGGTGTTTACCTTTTCTGATTTTGATGAACAAACAGACTTCTCTAGTCCTACGTCAATCCAATATTTGAAAAACAAGAAACAGAGG
AAAGACGGAATTCCATCAGCTGAATTCCGACATGCATTTTTGCCGATCTTTTTTAGCAATCAAATAACTAAATGGATCACATTTCATGGCATTCACGATGTTGCTTATTT
GTTGAAGCTAATGATGATTAGAACCATGCCGGATTCCATGGTGGAATTCGCCATCATAGCTCAATGTCACCTTGGTACAGTCAACGACCTAAAACACATTATTCGCAATT
GTGAACACTTAATGAACGGTGAACTTGGACTTAAGAGACTTGTCGAGTTACTCAATGTGAACGACACTATTTTCAACGGTGGTTCTGATAGTTTGTTGATAGCTTTGGCG
TATGCAAAGATGAAGAAGACGCTCAAGTTTTCGCCAAAGATTACTGATGGGTTTTTATATGGTTTTCATTACAGAATTCAAGGATATAGAACCTTTTGCTATCCAATAAC
ATATTACCCAAACTCATTATCTTTCCAAAATTTTCAACAATCTAACAACCACAGGATCATATTACCCAAACTCATTGTCTTTCCATAA
Protein sequenceShow/hide protein sequence
MSFVRQVWYHNLTQELTILNDRLFKFPMIAMDTEFPDFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKQR
KDGIPSAEFRHAFLPIFFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQCHLGTVNDLKHIIRNCEHLMNGELGLKRLVELLNVNDTIFNGGSDSLLIALA
YAKMKKTLKFSPKITDGFLYGFHYRIQGYRTFCYPITYYPNSLSFQNFQQSNNHRIILPKLIVFP