CuGenDBv2

Gene ID	Pay0016097
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Ty1-copia retrotransposon protein
Genome location	chr08:25416574..25417823
RNA-Seq Expression	Pay0016097
Synteny	Pay0016097
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type IPR036875 - Zinc finger, CCHC-type superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYK04394.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]

7.8e-169

82.85

Show/hide

Query:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGH
        MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT VAVTDQVKKDQVIDPEKYAKDNKTVRGH
Subjt:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGH

Query:  LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------
        LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPV+EQIHEYENLVANVLSEGMKMCEILQANVL              
Subjt:  LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------

Query:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
                                                         DRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Subjt:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG

Query:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGK
        RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGK
Subjt:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGK

TYK11299.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]

1.6e-174

97.78

Show/hide

Query:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGH
        MSIKTSNKILPDLSKLEPLD TNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT VAVT+QVK DQVIDPEKYAKDNKTVRGH
Subjt:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGH

Query:  LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKGHKGKNS
        LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANV+DRTKQEKGHKGKNS
Subjt:  LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKGHKGKNS

Query:  EKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGEC
        EKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDS+IIA IVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGEC
Subjt:  EKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGEC

Query:  VFMGNSATAGVIGKGK
        VFMGNSATAGVIGKGK
Subjt:  VFMGNSATAGVIGKGK

TYK11996.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]

1.3e-176

83.42

Show/hide

Query:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGH
        MSIKTSNKILPDLSKLEPL+GTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT VAVTDQVKKDQVIDPEKYAKDNKTVRGH
Subjt:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGH

Query:  LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------
        LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL              
Subjt:  LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------

Query:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
                                                         DRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Subjt:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG

Query:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWESVESGRA
        RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWESVESGRA
Subjt:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWESVESGRA

TYK24060.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]

1.3e-176

83.42

Show/hide

Query:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGH
        MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT VAVTDQVKKDQVIDPEKYAKDNKTVRGH
Subjt:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGH

Query:  LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------
        LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQM DDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL              
Subjt:  LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------

Query:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
                                                         DRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Subjt:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG

Query:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWESVESGRA
        RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWESVESGRA
Subjt:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWESVESGRA

XP_008445782.1 PREDICTED: uncharacterized protein LOC103488707 [Cucumis melo]

1.6e-182

97.87

Show/hide

Query:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGH
        MSIKTSNKILPDLSKLEPLD TNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT VAVT+QVK DQVIDPEKYAKDNKTVRGH
Subjt:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGH

Query:  LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKGHKGKNS
        LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANV+DRTKQEKGHKGKNS
Subjt:  LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKGHKGKNS

Query:  EKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGEC
        EKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDS+IIA IVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGEC
Subjt:  EKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGEC

Query:  VFMGNSATAGVIGKGKEPGVWESVESGRA
        VFMGNSATAGVIGKGKEPGVWESVESGRA
Subjt:  VFMGNSATAGVIGKGKEPGVWESVESGRA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BE75 uncharacterized protein LOC103488707

7.9e-183

97.87

Show/hide

Query:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGH
        MSIKTSNKILPDLSKLEPLD TNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT VAVT+QVK DQVIDPEKYAKDNKTVRGH
Subjt:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGH

Query:  LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKGHKGKNS
        LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANV+DRTKQEKGHKGKNS
Subjt:  LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKGHKGKNS

Query:  EKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGEC
        EKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDS+IIA IVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGEC
Subjt:  EKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGEC

Query:  VFMGNSATAGVIGKGKEPGVWESVESGRA
        VFMGNSATAGVIGKGKEPGVWESVESGRA
Subjt:  VFMGNSATAGVIGKGKEPGVWESVESGRA

A0A5D3BZI1 Ty1-copia retrotransposon protein

3.8e-169

82.85

Show/hide

Query:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGH
        MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT VAVTDQVKKDQVIDPEKYAKDNKTVRGH
Subjt:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGH

Query:  LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------
        LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPV+EQIHEYENLVANVLSEGMKMCEILQANVL              
Subjt:  LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------

Query:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
                                                         DRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Subjt:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG

Query:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGK
        RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGK
Subjt:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGK

A0A5D3CM58 Ty1-copia retrotransposon protein

7.9e-175

97.78

Show/hide

Query:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGH
        MSIKTSNKILPDLSKLEPLD TNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT VAVT+QVK DQVIDPEKYAKDNKTVRGH
Subjt:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGH

Query:  LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKGHKGKNS
        LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANV+DRTKQEKGHKGKNS
Subjt:  LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKGHKGKNS

Query:  EKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGEC
        EKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDS+IIA IVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGEC
Subjt:  EKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGEC

Query:  VFMGNSATAGVIGKGK
        VFMGNSATAGVIGKGK
Subjt:  VFMGNSATAGVIGKGK

A0A5D3CNJ2 Ty1-copia retrotransposon protein

6.4e-177

83.42

Show/hide

Query:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGH
        MSIKTSNKILPDLSKLEPL+GTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT VAVTDQVKKDQVIDPEKYAKDNKTVRGH
Subjt:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGH

Query:  LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------
        LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL              
Subjt:  LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------

Query:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
                                                         DRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Subjt:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG

Query:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWESVESGRA
        RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWESVESGRA
Subjt:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWESVESGRA

A0A5D3DL36 Ty1-copia retrotransposon protein

6.4e-177

83.42

Show/hide

Query:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGH
        MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT VAVTDQVKKDQVIDPEKYAKDNKTVRGH
Subjt:  MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGH

Query:  LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------
        LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQM DDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL              
Subjt:  LLNHMSDPMFDLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL--------------

Query:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
                                                         DRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Subjt:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKG

Query:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWESVESGRA
        RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWESVESGRA
Subjt:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWESVESGRA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G00980.1 zinc knuckle (CCHC-type) family protein

8.2e-15

25.43

Show/hide

Query:  KLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFV
        K+   DG +Y  W+ ++ +F +QL++ YVL      S+P  +  +S  PE++   +T    T           +K+ +D+     HL+N +SD ++  + 
Subjt:  KLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFV

Query:  VQ-KSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL
         + K AK++W  L+  Y  D++  K+  V K+++F+M +++P++EQ+  +  +  +++S GM + E    + +
Subjt:  VQ-KSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCGATCAAGACTTCCAACAAAATCCTACCGGACCTGTCTAAACTTGAACCACTCGACGGAACAAACTACCGCCGTTGGTCCCAAAAGTTGCTAATCTTCTTTGAGCA
ACTAGAAGTCGATTATGTCCTCACCACAGATCTCCCGACATCTGACCCCCCAACTACCACGTCAACATCCTCTGATCCAGAATCATCTACGGGACCTCTTACAGTTGTTG
CTGTCACTGATCAAGTAAAGAAGGACCAAGTGATTGATCCTGAAAAATATGCAAAGGATAACAAGACCGTTCGAGGACACCTGTTAAACCATATGTCTGATCCGATGTTT
GATCTCTTCGTAGTCCAAAAATCTGCCAAGGACATCTGGAGCACCCTGGAATCACGGTATGGAGGAGATGATGCTGGACGGAAAAAATATGTAGTTGGAAAATGGCTACA
ATTCCAGATGACTGACGACAAACCAGTCGTGGAACAAATTCATGAGTACGAGAACTTGGTGGCAAACGTCCTGTCTGAAGGCATGAAGATGTGCGAAATACTTCAAGCAA
ATGTCCTAGACAGAACGAAGCAGGAAAAAGGACATAAAGGGAAAAACTCAGAGAAGAGACAATTCAAGACCACTGGGGGACAAATTAAGAAGAAAAAGCTGGTCTGCTAC
GTGTGCGGAAAGGAAGGGCACAAATCATACCAGTGCAACCAGAGGAAAGGGAGGCCAAGTCAGAAACCAACACCTCAAGCCAATCTAGCAGAGCAAGACAGTGAGATCAT
AGCAGCCATAGTAGAAGCCAATCTGATAGAAAACAAGACGGACTGGATTCTCGACACTGGAGCCTCGAGACACTTCTGCACCAATCGTGAACTACTCCATGACTACGAAG
ACACTGCTGATGGAGAATGCGTGTTCATGGGAAACTCAGCCACTGCAGGAGTAATCGGGAAAGGGAAGGAACCTGGTGTCTGGGAGTCTGTTGAATCGGGCCGGGCTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTVVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMF
DLFVVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCY
VCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWESVESGRA

Pay0016097 (gene) of Melon (Payzawat) v1 genome