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Pay0016142 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0016142
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Descriptiongeranylgeranyl transferase type-2 subunit alpha 1
Genome locationchr04:1767814..1769367
RNA-Seq ExpressionPay0016142
SyntenyPay0016142
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134583.1 geranylgeranyl transferase type-2 subunit alpha 1 [Cucumis sativus]1.1e-0740.6Show/hide
Query:  NEKFHIETPLSL------FIPLRWTCFDQEERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSIYGSIIYQLQGSNL-YKRKYRRVLMLDLNNNE
        NE   +E  L L      F P  +  +  E  +    L  VTST++ L  H  SYKEQTSPYIDST  +    +  L  S +    K   V +LDL++NE
Subjt:  NEKFHIETPLSL------FIPLRWTCFDQEERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSIYGSIIYQLQGSNL-YKRKYRRVLMLDLNNNE

Query:  LRLIEGLKAMQLLSCLSYSGASYQLIGPFISEE
        L  I+GL++MQLLSCLS S      IG F + E
Subjt:  LRLIEGLKAMQLLSCLSYSGASYQLIGPFISEE

XP_008439572.1 PREDICTED: geranylgeranyl transferase type-2 subunit alpha [Cucumis melo]6.9e-0735.14Show/hide
Query:  LDPPHVHYYRVQHILVLFAEAFLSRYDGHVLFVCINEKFHIETPLSLFIPLRWTCFDQEERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSI-Y
        LDP HVH+Y+ +H LVL                                                 L  VTST++ L  H  SYKEQTSPYIDS   +  
Subjt:  LDPPHVHYYRVQHILVLFAEAFLSRYDGHVLFVCINEKFHIETPLSLFIPLRWTCFDQEERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSI-Y

Query:  GSIIYQLQGSNLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYS
         +      GS     K+  V +LDL++NEL+ I+GL++MQLLSCLS S
Subjt:  GSIIYQLQGSNLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYS

XP_016903570.1 PREDICTED: uncharacterized protein LOC103503652 [Cucumis melo]3.7e-6981.82Show/hide
Query:  MLDPPHVHYYRVQHILVLFAEAFLSRYDGHVLFVCINEKFHIETPLSLFIPLRWTCFDQEERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSIY
        MLDPPHVHYYRVQHILVLFAEAFLSRYDGHV+                           EERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSIY
Subjt:  MLDPPHVHYYRVQHILVLFAEAFLSRYDGHVLFVCINEKFHIETPLSLFIPLRWTCFDQEERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSIY

Query:  GSIIYQLQGSNLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYSGASYQLIGP--FISEELKSERNVIWKEN
        GSIIYQLQGSNLYKRKYR VLMLDLNNNELRLIEGLKAMQLLSCLSYSGAS+QLIGP  FISEELKSERNVIWKEN
Subjt:  GSIIYQLQGSNLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYSGASYQLIGP--FISEELKSERNVIWKEN

XP_038898631.1 geranylgeranyl transferase type-2 subunit alpha 1 isoform X1 [Benincasa hispida]6.3e-0836.05Show/hide
Query:  LDPPHVHYYRVQHILVLFAEAFLSRYDGHVLFVCINEKFHIETPLSLFIPLRWTCFDQEERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSIYG
        LDP HVHYY+ +H LVL                                                 L  VTST++ L  H  SYKEQTSPYIDST  +  
Subjt:  LDPPHVHYYRVQHILVLFAEAFLSRYDGHVLFVCINEKFHIETPLSLFIPLRWTCFDQEERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSIYG

Query:  SIIYQLQGSNLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYS
        + +   +  ++ K  + +V  LDL+ NELR I+GL++MQLLSCLS S
Subjt:  SIIYQLQGSNLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYS

XP_038898638.1 geranylgeranyl transferase type-2 subunit alpha 1 isoform X2 [Benincasa hispida]6.3e-0836.05Show/hide
Query:  LDPPHVHYYRVQHILVLFAEAFLSRYDGHVLFVCINEKFHIETPLSLFIPLRWTCFDQEERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSIYG
        LDP HVHYY+ +H LVL                                                 L  VTST++ L  H  SYKEQTSPYIDST  +  
Subjt:  LDPPHVHYYRVQHILVLFAEAFLSRYDGHVLFVCINEKFHIETPLSLFIPLRWTCFDQEERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSIYG

Query:  SIIYQLQGSNLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYS
        + +   +  ++ K  + +V  LDL+ NELR I+GL++MQLLSCLS S
Subjt:  SIIYQLQGSNLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYS

TrEMBL top hitse value%identityAlignment
A0A0A0KP31 Uncharacterized protein5.2e-0840.6Show/hide
Query:  NEKFHIETPLSL------FIPLRWTCFDQEERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSIYGSIIYQLQGSNL-YKRKYRRVLMLDLNNNE
        NE   +E  L L      F P  +  +  E  +    L  VTST++ L  H  SYKEQTSPYIDST  +    +  L  S +    K   V +LDL++NE
Subjt:  NEKFHIETPLSL------FIPLRWTCFDQEERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSIYGSIIYQLQGSNL-YKRKYRRVLMLDLNNNE

Query:  LRLIEGLKAMQLLSCLSYSGASYQLIGPFISEE
        L  I+GL++MQLLSCLS S      IG F + E
Subjt:  LRLIEGLKAMQLLSCLSYSGASYQLIGPFISEE

A0A1S3AZP9 geranylgeranyl transferase type-2 subunit alpha3.3e-0735.14Show/hide
Query:  LDPPHVHYYRVQHILVLFAEAFLSRYDGHVLFVCINEKFHIETPLSLFIPLRWTCFDQEERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSI-Y
        LDP HVH+Y+ +H LVL                                                 L  VTST++ L  H  SYKEQTSPYIDS   +  
Subjt:  LDPPHVHYYRVQHILVLFAEAFLSRYDGHVLFVCINEKFHIETPLSLFIPLRWTCFDQEERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSI-Y

Query:  GSIIYQLQGSNLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYS
         +      GS     K+  V +LDL++NEL+ I+GL++MQLLSCLS S
Subjt:  GSIIYQLQGSNLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYS

A0A1S4E6H3 uncharacterized protein LOC1035036521.8e-6981.82Show/hide
Query:  MLDPPHVHYYRVQHILVLFAEAFLSRYDGHVLFVCINEKFHIETPLSLFIPLRWTCFDQEERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSIY
        MLDPPHVHYYRVQHILVLFAEAFLSRYDGHV+                           EERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSIY
Subjt:  MLDPPHVHYYRVQHILVLFAEAFLSRYDGHVLFVCINEKFHIETPLSLFIPLRWTCFDQEERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSIY

Query:  GSIIYQLQGSNLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYSGASYQLIGP--FISEELKSERNVIWKEN
        GSIIYQLQGSNLYKRKYR VLMLDLNNNELRLIEGLKAMQLLSCLSYSGAS+QLIGP  FISEELKSERNVIWKEN
Subjt:  GSIIYQLQGSNLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYSGASYQLIGP--FISEELKSERNVIWKEN

A0A4Y1QWA9 RAB geranylgeranyl transferase alpha subunit 13.3e-0736.88Show/hide
Query:  LDPPHVHYYRVQHILVLFAEAFLSRYDGHVLFVCINEKFHIETPLSLFIPLRWTCFDQEERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSI-Y
        LDP H  YY+ QH LV   E  LS    HV  V  N +  ++   +L +    TC              VTS ++ L  H CSYK   S  I +   +  
Subjt:  LDPPHVHYYRVQHILVLFAEAFLSRYDGHVLFVCINEKFHIETPLSLFIPLRWTCFDQEERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSI-Y

Query:  GSIIYQLQGSNLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYS---GASYQLIGP
         +I     GS     K+  V MLDL++NEL  IEGL+AMQLLSCL+ S    +S+  +GP
Subjt:  GSIIYQLQGSNLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYS---GASYQLIGP

A0A5A7UAV7 Geranylgeranyl transferase type-2 subunit alpha2.8e-0633.78Show/hide
Query:  LDPPHVHYYRVQHILVLFAEAFLSRYDGHVLFVCINEKFHIETPLSLFIPLRWTCFDQEERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSI-Y
        LDP HVH+Y+ +H LVL                                                 L  VTS ++ L  H  SYKEQTSPYIDS   +  
Subjt:  LDPPHVHYYRVQHILVLFAEAFLSRYDGHVLFVCINEKFHIETPLSLFIPLRWTCFDQEERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSI-Y

Query:  GSIIYQLQGSNLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYS
         ++     GS      +  V +LDL++NEL+ I+GL++MQLLSCLS S
Subjt:  GSIIYQLQGSNLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYS

SwissProt top hitse value%identityAlignment
Q8VYB7 Geranylgeranyl transferase type-2 subunit alpha 19.7e-0439.02Show/hide
Query:  FLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSIYGSIIYQLQGSNLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYS
        FL  VTS+ + LS H   Y++  +       ++  S I  ++       K   V MLDL++NEL   EGL+AMQLLSCL+ S
Subjt:  FLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSIYGSIIYQLQGSNLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYS

Arabidopsis top hitse value%identityAlignment
AT4G24490.1 RAB geranylgeranyl transferase alpha subunit 16.9e-0539.02Show/hide
Query:  FLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSIYGSIIYQLQGSNLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYS
        FL  VTS+ + LS H   Y++  +       ++  S I  ++       K   V MLDL++NEL   EGL+AMQLLSCL+ S
Subjt:  FLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSIYGSIIYQLQGSNLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYS

AT4G24490.2 RAB geranylgeranyl transferase alpha subunit 16.9e-0539.02Show/hide
Query:  FLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSIYGSIIYQLQGSNLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYS
        FL  VTS+ + LS H   Y++  +       ++  S I  ++       K   V MLDL++NEL   EGL+AMQLLSCL+ S
Subjt:  FLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSIYGSIIYQLQGSNLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGACCCACCACATGTTCATTACTACAGGGTTCAACACATCTTGGTTTTATTTGCAGAAGCCTTTTTATCCCGTTACGATGGACATGTTTTGTTTGTGTGCATAAA
TGAGAAATTTCATATTGAAACTCCCCTCAGCCTTTTTATCCCGTTACGATGGACATGTTTTGATCAGGAAGAGAGAATGACATTCGGGTTTCTTTCACATGTGACATCGA
CTAAGCAGTTTTTGTCAGGACATCGTTGTTCCTACAAAGAGCAGACATCACCATATATCGATAGTACTACTTCCATCTACGGCTCAATAATTTATCAACTTCAAGGATCG
AATCTATACAAAAGAAAATACCGCCGGGTGCTAATGCTCGACCTCAACAACAATGAACTTCGATTAATTGAAGGATTGAAGGCCATGCAACTCCTTTCTTGCTTGAGTTA
CTCTGGAGCCTCTTACCAATTGATTGGACCGTTTATTAGTGAAGAATTGAAATCAGAAAGAAATGTCATATGGAAGGAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGACCCACCACATGTTCATTACTACAGGGTTCAACACATCTTGGTTTTATTTGCAGAAGCCTTTTTATCCCGTTACGATGGACATGTTTTGTTTGTGTGCATAAA
TGAGAAATTTCATATTGAAACTCCCCTCAGCCTTTTTATCCCGTTACGATGGACATGTTTTGATCAGGAAGAGAGAATGACATTCGGGTTTCTTTCACATGTGACATCGA
CTAAGCAGTTTTTGTCAGGACATCGTTGTTCCTACAAAGAGCAGACATCACCATATATCGATAGTACTACTTCCATCTACGGCTCAATAATTTATCAACTTCAAGGATCG
AATCTATACAAAAGAAAATACCGCCGGGTGCTAATGCTCGACCTCAACAACAATGAACTTCGATTAATTGAAGGATTGAAGGCCATGCAACTCCTTTCTTGCTTGAGTTA
CTCTGGAGCCTCTTACCAATTGATTGGACCGTTTATTAGTGAAGAATTGAAATCAGAAAGAAATGTCATATGGAAGGAGAATTGA
Protein sequenceShow/hide protein sequence
MLDPPHVHYYRVQHILVLFAEAFLSRYDGHVLFVCINEKFHIETPLSLFIPLRWTCFDQEERMTFGFLSHVTSTKQFLSGHRCSYKEQTSPYIDSTTSIYGSIIYQLQGS
NLYKRKYRRVLMLDLNNNELRLIEGLKAMQLLSCLSYSGASYQLIGPFISEELKSERNVIWKEN