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Pay0016163 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0016163
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationchr09:14235865..14236569
RNA-Seq ExpressionPay0016163
SyntenyPay0016163
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
InterPro domainsIPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4916693.1 hypothetical protein JHK87_054250 [Glycine soja]1.9e-1089.74Show/hide
Query:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS
        RI+RCGGA+DDDMSNIIVAQLLYLDAIDPN+DI+MYVNS
Subjt:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS

KAG4928663.1 hypothetical protein JHK85_055149 [Glycine max]1.9e-1089.74Show/hide
Query:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS
        RI+RCGGA+DDDMSNIIVAQLLYLDAIDPN+DI+MYVNS
Subjt:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS

KAG5084173.1 hypothetical protein JHK84_054211 [Glycine max]1.9e-1089.74Show/hide
Query:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS
        RI+RCGGA+DDDMSNIIVAQLLYLDAIDPN+DI+MYVNS
Subjt:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS

XP_008450213.1 PREDICTED: uncharacterized protein LOC103491874 [Cucumis melo]4.9e-1471.01Show/hide
Query:  NRSLPVLTPVASSTKSDSCWCRDANSNR--------RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDI
        +R  P+ TPVASSTKSDS   RDANS+R        RIIRCGGALDDDM+NIIVAQLLYLDAIDPN+ I
Subjt:  NRSLPVLTPVASSTKSDSCWCRDANSNR--------RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDI

XP_030947084.1 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Quercus lobata]3.3e-1087.18Show/hide
Query:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS
        RIIRCGGA+DDDM+NIIVAQLLYLDA+DPN+DI+MYVNS
Subjt:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS

TrEMBL top hitse value%identityAlignment
A0A1S3BPQ7 uncharacterized protein LOC1034918742.4e-1471.01Show/hide
Query:  NRSLPVLTPVASSTKSDSCWCRDANSNR--------RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDI
        +R  P+ TPVASSTKSDS   RDANS+R        RIIRCGGALDDDM+NIIVAQLLYLDAIDPN+ I
Subjt:  NRSLPVLTPVASSTKSDSCWCRDANSNR--------RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDI

A0A445FJU8 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic isoform A9.3e-1189.74Show/hide
Query:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS
        RI+RCGGA+DDDMSNIIVAQLLYLDAIDPN+DI+MYVNS
Subjt:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS

A0A5B6ZBE3 ATP-dependent Clp protease proteolytic subunit1.6e-1089.74Show/hide
Query:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS
        RIIRCGGA+DDDM+NIIVAQLLYLDAIDPN+DI+MYVNS
Subjt:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS

A0A5B6ZBH3 ATP-dependent Clp protease proteolytic subunit1.6e-1089.74Show/hide
Query:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS
        RIIRCGGA+DDDM+NIIVAQLLYLDAIDPN+DI+MYVNS
Subjt:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS

A0A5B6ZC53 ATP-dependent Clp protease proteolytic subunit1.6e-1089.74Show/hide
Query:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS
        RIIRCGGA+DDDM+NIIVAQLLYLDAIDPN+DI+MYVNS
Subjt:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS

SwissProt top hitse value%identityAlignment
A5GFA0 ATP-dependent Clp protease proteolytic subunit2.3e-0656.41Show/hide
Query:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS
        RI+  GGA+DD +SN+++AQLL+L+A DP++DI +Y+NS
Subjt:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS

B5EI27 ATP-dependent Clp protease proteolytic subunit5.1e-0653.85Show/hide
Query:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS
        RII  GG +DD+++N+++AQLL+L+A DP++DI +Y+NS
Subjt:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS

B9M0Y1 ATP-dependent Clp protease proteolytic subunit1.3e-0658.97Show/hide
Query:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS
        RII  GGA+DD +SN+++AQLL+L+A DP++DI +Y+NS
Subjt:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS

C6E2T0 ATP-dependent Clp protease proteolytic subunit5.1e-0653.85Show/hide
Query:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS
        RII  GG +DD+++N+++AQLL+L+A DP++DI +Y+NS
Subjt:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS

Q9S834 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic2.8e-1284.62Show/hide
Query:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS
        RIIRCGGA+DDDM+NIIVAQLLYLDA+DP +DI+MYVNS
Subjt:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 52.0e-1384.62Show/hide
Query:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS
        RIIRCGGA+DDDM+NIIVAQLLYLDA+DP +DI+MYVNS
Subjt:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS

AT5G23140.1 nuclear-encoded CLP protease P75.8e-0551.28Show/hide
Query:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS
        RII   G ++DD S+++VAQLLYL++ +P++ I MY+NS
Subjt:  RIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS

AT5G45390.1 CLP protease P46.4e-0432Show/hide
Query:  SPHLSRCLNRSLPVLTPVASSTKSDSCWCRDANSNRRIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS
        SP   R  N S+ +     S+ +             RI+  G ++DD +++ I++QLL LDA DP +DI +++NS
Subjt:  SPHLSRCLNRSLPVLTPVASSTKSDSCWCRDANSNRRIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCCCGTCACCACATCTCAGCCGCTGCCTCAATCGTTCGCTGCCAGTGCTGACTCCAGTCGCAAGCTCAACTAAATCTGACTCCTGCTGGTGCCGTGATGCTAATTC
CAACCGTAGAATTATTCGTTGTGGTGGAGCCCTTGATGATGATATGTCGAATATCATTGTTGCTCAACTTCTATACCTTGATGCTATTGATCCCAATGAGGATATTATGA
TGTATGTAAATTCCCGTGTTGAGTTACAGCTGGTAATATTGAAACCGGTGGAAACCATATCACTGATTGTTTGTTCTGTTGGAAACTGGGACGAGCTTTATCTTTTAACT
ACTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCCCGTCACCACATCTCAGCCGCTGCCTCAATCGTTCGCTGCCAGTGCTGACTCCAGTCGCAAGCTCAACTAAATCTGACTCCTGCTGGTGCCGTGATGCTAATTC
CAACCGTAGAATTATTCGTTGTGGTGGAGCCCTTGATGATGATATGTCGAATATCATTGTTGCTCAACTTCTATACCTTGATGCTATTGATCCCAATGAGGATATTATGA
TGTATGTAAATTCCCGTGTTGAGTTACAGCTGGTAATATTGAAACCGGTGGAAACCATATCACTGATTGTTTGTTCTGTTGGAAACTGGGACGAGCTTTATCTTTTAACT
ACTGATTAA
Protein sequenceShow/hide protein sequence
MPPSPHLSRCLNRSLPVLTPVASSTKSDSCWCRDANSNRRIIRCGGALDDDMSNIIVAQLLYLDAIDPNEDIMMYVNSRVELQLVILKPVETISLIVCSVGNWDELYLLT
TD