| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 2.7e-215 | 68.89 | Show/hide |
Query: MVRSMMSFAQLPDSFWGYALETTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNLKKLERRSKLCLFVGYPKESKGGLFYDPQENKVF
MVRSMMS+AQLPDSFWGYALET I+ILNNVPSKSV ETPYELWKGRK SLR+FRIWGCPAHVLVQN KKLE RSKLCLFVGYPKES+GGLFY PQENKVF
Subjt: MVRSMMSFAQLPDSFWGYALETTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNLKKLERRSKLCLFVGYPKESKGGLFYDPQENKVF
Query: VSTNATFLEEDHIRNHQTRSKLVLEEISKNTTDRPSSSTKVVDKTRNIGQTHPSQELGEPRRSGRVVRQPDRYL--------------------------
VSTNATFLEEDH RNHQ RSK+VL+E+ KN TD+PSSSTKVVDK Q+H SQEL PRRSGRVV QP+RYL
Subjt: VSTNATFLEEDHIRNHQTRSKLVLEEISKNTTDRPSSSTKVVDKTRNIGQTHPSQELGEPRRSGRVVRQPDRYL--------------------------
Query: -------------------------------------------------------------GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYEIWQ
GYTQKEG+DYEETFSPVAM+KSIRILLSIATFY+YEIWQ
Subjt: -------------------------------------------------------------GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYEIWQ
Query: MDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGNDVGH
MDVKT FLNGNLEESIYM LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYK+I+NS VAFL+LYVDDILLIGNDV +
Subjt: MDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGNDVGH
Query: LTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYS
LTD+KKWL TQFQMKDLG AQY+LGIQIVRNRKNKTLAMSQ SYIDK+LSRYKMQNSKKG LP+R+GIHLSKEQCPKTPQEVEDM NIPY+SAVGSLMY+
Subjt: LTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYS
Query: MLCTRPDIRYSVEI-------------TTVKNILKYLRRTKDCMLVYGSKDLILTGYTDSDFQTDKYARKSISRLVFTLNRGAIV
MLCTRPDI YSV I T VKNILKYLRRT++ MLVYG+KDLILTGYTDSDFQ+DK ARKS S VFTLN GA+V
Subjt: MLCTRPDIRYSVEI-------------TTVKNILKYLRRTKDCMLVYGSKDLILTGYTDSDFQTDKYARKSISRLVFTLNRGAIV
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 6.7e-198 | 63.61 | Show/hide |
Query: MVRSMMSFAQLPDSFWGYALETTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNLKKLERRSKLCLFVGYPKESKGGLFYDPQENKVF
MVRSMMS+AQLP SFWGYA+ET ++ILNNVPSKSVSETP+ELW+GRK SL HFRIWGCPAHVLV N KKLE RS+LC FVGYPKE++GGLF+DPQEN+VF
Subjt: MVRSMMSFAQLPDSFWGYALETTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNLKKLERRSKLCLFVGYPKESKGGLFYDPQENKVF
Query: VSTNATFLEEDHIRNHQTRSKLVLEEISKNTT---DRPSSSTKVVDKTRNIGQTHPSQELGEPRRSGRVVRQPDRYL-----------------------
VSTNATFLEEDH+RNH+ RSKLVL E + +T D S++ VD+T GQ+HPSQ L PRRSGRVV QP+RYL
Subjt: VSTNATFLEEDHIRNHQTRSKLVLEEISKNTT---DRPSSSTKVVDKTRNIGQTHPSQELGEPRRSGRVVRQPDRYL-----------------------
Query: ----------------------------------------------------------------GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYE
GYTQ+EG+DYEETFSPVAM+KSIRILLSIATFYDYE
Subjt: ----------------------------------------------------------------GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYE
Query: IWQMDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGND
IWQMDVKT FLNGNLEESI+M L +SIYGLKQASRSWNIRFDTAIKSYGF+QNVDEPCVYK+I VAFLVLYVDDILLIGND
Subjt: IWQMDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGND
Query: VGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSL
VG+LTD+K WLA QFQMKDLG AQYVLGIQI+R+RKNKTLA+SQ +YIDK+L RY MQNSKKGLLP+R+G+HLSKEQ PKTPQEVEDM IPYASAVGSL
Subjt: VGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSL
Query: MYSMLCTRPDIRYSVEI-------------TTVKNILKYLRRTKDCMLVYGSKDLILTGYTDSDFQTDKYARKSISRLVFTLNRGAIV
MY+MLCTRPDI Y+V I T VK +LKYLRRT+D MLVYG+KDLILTGYTDSDFQTDK +RKS S VFTLN GA+V
Subjt: MYSMLCTRPDIRYSVEI-------------TTVKNILKYLRRTKDCMLVYGSKDLILTGYTDSDFQTDKYARKSISRLVFTLNRGAIV
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 1.4e-195 | 63.1 | Show/hide |
Query: MVRSMMSFAQLPDSFWGYALETTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNLKKLERRSKLCLFVGYPKESKGGLFYDPQENKVF
MVRSMMS+AQLP SFWGYA+ET ++ILNNVPSKSVSETP+ELW+GRK SL HFRIWGCPAHVLV N KKLE RS+LC FVGYPKE++GGLF+DP+EN+VF
Subjt: MVRSMMSFAQLPDSFWGYALETTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNLKKLERRSKLCLFVGYPKESKGGLFYDPQENKVF
Query: VSTNATFLEEDHIRNHQTRSKLVLEEISKNTT---DRPSSSTKVVDKTRNIGQTHPSQELGEPRRSGRVVRQPDRYL-----------------------
VSTNATFLEEDH+RNH+ RSKLVL E + +T D S++ VD+T GQ+HPSQ L PRRSGRVV QP+RYL
Subjt: VSTNATFLEEDHIRNHQTRSKLVLEEISKNTT---DRPSSSTKVVDKTRNIGQTHPSQELGEPRRSGRVVRQPDRYL-----------------------
Query: ----------------------------------------------------------------GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYE
GYT+KEG+DYEETFS VAM+KSIRILLSIA FYDYE
Subjt: ----------------------------------------------------------------GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYE
Query: IWQMDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGND
IWQMDVKT FLNGNLEESI+M L +SIYGLKQASRSWNIRFDTAIKSYGF+QNVDEPCVYK+I VAFLVLYVDDILLIGND
Subjt: IWQMDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGND
Query: VGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSL
VG+LTD+K WLA QFQMKDLG QYVLGIQI+R+RKNKTLA+SQ +YIDK+L RY MQNSKKGLLP+R+G+HLSKEQ PKTPQEVEDM IPYASAVGSL
Subjt: VGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSL
Query: MYSMLCTRPDIRYSVEI-------------TTVKNILKYLRRTKDCMLVYGSKDLILTGYTDSDFQTDKYARKSISRLVFTLNRGAIV
MY+MLCTRPDI Y+V I T VK ILKYLRRT+D MLVYG+KDLILTGYT+SDFQTDK +RKS SR VFTLN GA+V
Subjt: MYSMLCTRPDIRYSVEI-------------TTVKNILKYLRRTKDCMLVYGSKDLILTGYTDSDFQTDKYARKSISRLVFTLNRGAIV
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 6.7e-198 | 63.61 | Show/hide |
Query: MVRSMMSFAQLPDSFWGYALETTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNLKKLERRSKLCLFVGYPKESKGGLFYDPQENKVF
MVRSMMS+AQLP SFWGYA+ET ++ILNNVPSKSVSETP+ELW+GRK SL HFRIWGCPAHVLV N KKLE RS+LC FVGYPKE++GGLF+DPQEN+VF
Subjt: MVRSMMSFAQLPDSFWGYALETTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNLKKLERRSKLCLFVGYPKESKGGLFYDPQENKVF
Query: VSTNATFLEEDHIRNHQTRSKLVLEEISKNTT---DRPSSSTKVVDKTRNIGQTHPSQELGEPRRSGRVVRQPDRYL-----------------------
VSTNATFLEEDH+RNH+ RSKLVL E + +T D S++ VD+T GQ+HPSQ L PRRSGRVV QP+RYL
Subjt: VSTNATFLEEDHIRNHQTRSKLVLEEISKNTT---DRPSSSTKVVDKTRNIGQTHPSQELGEPRRSGRVVRQPDRYL-----------------------
Query: ----------------------------------------------------------------GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYE
GYTQ+EG+DYEETFSPVAM+KSIRILLSIATFYDYE
Subjt: ----------------------------------------------------------------GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYE
Query: IWQMDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGND
IWQMDVKT FLNGNLEESI+M L +SIYGLKQASRSWNIRFDTAIKSYGF+QNVDEPCVYK+I VAFLVLYVDDILLIGND
Subjt: IWQMDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGND
Query: VGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSL
VG+LTD+K WLA QFQMKDLG AQYVLGIQI+R+RKNKTLA+SQ +YIDK+L RY MQNSKKGLLP+R+G+HLSKEQ PKTPQEVEDM IPYASAVGSL
Subjt: VGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSL
Query: MYSMLCTRPDIRYSVEI-------------TTVKNILKYLRRTKDCMLVYGSKDLILTGYTDSDFQTDKYARKSISRLVFTLNRGAIV
MY+MLCTRPDI Y+V I T VK +LKYLRRT+D MLVYG+KDLILTGYTDSDFQTDK +RKS S VFTLN GA+V
Subjt: MYSMLCTRPDIRYSVEI-------------TTVKNILKYLRRTKDCMLVYGSKDLILTGYTDSDFQTDKYARKSISRLVFTLNRGAIV
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 3.6e-228 | 74.36 | Show/hide |
Query: MVRSMMSFAQLPDSFWGYALETTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNLKKLERRSKLCLFVGYPKESKGGLFYDPQENKVF
MVRSMMSF QLPDSFW YALETTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHV VQN KKLERRSKLCLFVGYPKESKGGLFYDPQENKVF
Subjt: MVRSMMSFAQLPDSFWGYALETTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNLKKLERRSKLCLFVGYPKESKGGLFYDPQENKVF
Query: VSTNATFLEEDHIRNHQTRSKLVLEEISKNTTDRPSSSTKVVDKTRNIGQTHPSQELGEPRRSGRVVRQPDRYL--------------------------
VSTNATFLEEDHIRNHQTRSKLVLEEISKNTTDRPSS TKVVDKTRNIGQTH QELG+PRRSGRVVRQ DRYL
Subjt: VSTNATFLEEDHIRNHQTRSKLVLEEISKNTTDRPSSSTKVVDKTRNIGQTHPSQELGEPRRSGRVVRQPDRYL--------------------------
Query: -------------------------------------------------------------GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYEIWQ
GYTQKEGIDYEE FS AMIKSIRILLSIATFYDYEIWQ
Subjt: -------------------------------------------------------------GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYEIWQ
Query: MDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGNDVGH
MDVKTTFLN NLEESIYM LQKSIYGLKQASRS NIRFDTAIKSYG EQNVDEPCVYKRI+NSTVAFLVLYVDDILLIGNDVGH
Subjt: MDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGNDVGH
Query: LTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYS
L DIKKWLA QFQMKDLGNAQYVLG+QIVRNRKNKTLAMSQTSYIDKMLSRYKM NSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMY
Subjt: LTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYS
Query: MLCTRPDIRYSVEI-------------TTVKNILKYLRRTKDCMLVYGSKDLILTGYTDSDFQTDKYARKSISRLVFTLNRGAIV
MLCTRP+I YSV I TTVKNILKYLRRTKD MLVYGSKDLILTGYTD FQTDK ARKS S LVFT+N GA+V
Subjt: MLCTRPDIRYSVEI-------------TTVKNILKYLRRTKDCMLVYGSKDLILTGYTDSDFQTDKYARKSISRLVFTLNRGAIV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T2V9 Gag/pol protein | 6.7e-196 | 63.1 | Show/hide |
Query: MVRSMMSFAQLPDSFWGYALETTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNLKKLERRSKLCLFVGYPKESKGGLFYDPQENKVF
MVRSMMS+AQLP SFWGYA+ET ++ILNNVPSKSVSETP+ELW+GRK SL HFRIWGCPAHVLV N KKLE RS+LC FVGYPKE++GGLF+DP+EN+VF
Subjt: MVRSMMSFAQLPDSFWGYALETTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNLKKLERRSKLCLFVGYPKESKGGLFYDPQENKVF
Query: VSTNATFLEEDHIRNHQTRSKLVLEEISKNTT---DRPSSSTKVVDKTRNIGQTHPSQELGEPRRSGRVVRQPDRYL-----------------------
VSTNATFLEEDH+RNH+ RSKLVL E + +T D S++ VD+T GQ+HPSQ L PRRSGRVV QP+RYL
Subjt: VSTNATFLEEDHIRNHQTRSKLVLEEISKNTT---DRPSSSTKVVDKTRNIGQTHPSQELGEPRRSGRVVRQPDRYL-----------------------
Query: ----------------------------------------------------------------GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYE
GYT+KEG+DYEETFS VAM+KSIRILLSIA FYDYE
Subjt: ----------------------------------------------------------------GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYE
Query: IWQMDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGND
IWQMDVKT FLNGNLEESI+M L +SIYGLKQASRSWNIRFDTAIKSYGF+QNVDEPCVYK+I VAFLVLYVDDILLIGND
Subjt: IWQMDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGND
Query: VGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSL
VG+LTD+K WLA QFQMKDLG QYVLGIQI+R+RKNKTLA+SQ +YIDK+L RY MQNSKKGLLP+R+G+HLSKEQ PKTPQEVEDM IPYASAVGSL
Subjt: VGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSL
Query: MYSMLCTRPDIRYSVEI-------------TTVKNILKYLRRTKDCMLVYGSKDLILTGYTDSDFQTDKYARKSISRLVFTLNRGAIV
MY+MLCTRPDI Y+V I T VK ILKYLRRT+D MLVYG+KDLILTGYT+SDFQTDK +RKS SR VFTLN GA+V
Subjt: MYSMLCTRPDIRYSVEI-------------TTVKNILKYLRRTKDCMLVYGSKDLILTGYTDSDFQTDKYARKSISRLVFTLNRGAIV
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| A0A5A7TZD0 Gag/pol protein | 3.2e-198 | 63.61 | Show/hide |
Query: MVRSMMSFAQLPDSFWGYALETTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNLKKLERRSKLCLFVGYPKESKGGLFYDPQENKVF
MVRSMMS+AQLP SFWGYA+ET ++ILNNVPSKSVSETP+ELW+GRK SL HFRIWGCPAHVLV N KKLE RS+LC FVGYPKE++GGLF+DPQEN+VF
Subjt: MVRSMMSFAQLPDSFWGYALETTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNLKKLERRSKLCLFVGYPKESKGGLFYDPQENKVF
Query: VSTNATFLEEDHIRNHQTRSKLVLEEISKNTT---DRPSSSTKVVDKTRNIGQTHPSQELGEPRRSGRVVRQPDRYL-----------------------
VSTNATFLEEDH+RNH+ RSKLVL E + +T D S++ VD+T GQ+HPSQ L PRRSGRVV QP+RYL
Subjt: VSTNATFLEEDHIRNHQTRSKLVLEEISKNTT---DRPSSSTKVVDKTRNIGQTHPSQELGEPRRSGRVVRQPDRYL-----------------------
Query: ----------------------------------------------------------------GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYE
GYTQ+EG+DYEETFSPVAM+KSIRILLSIATFYDYE
Subjt: ----------------------------------------------------------------GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYE
Query: IWQMDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGND
IWQMDVKT FLNGNLEESI+M L +SIYGLKQASRSWNIRFDTAIKSYGF+QNVDEPCVYK+I VAFLVLYVDDILLIGND
Subjt: IWQMDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGND
Query: VGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSL
VG+LTD+K WLA QFQMKDLG AQYVLGIQI+R+RKNKTLA+SQ +YIDK+L RY MQNSKKGLLP+R+G+HLSKEQ PKTPQEVEDM IPYASAVGSL
Subjt: VGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSL
Query: MYSMLCTRPDIRYSVEI-------------TTVKNILKYLRRTKDCMLVYGSKDLILTGYTDSDFQTDKYARKSISRLVFTLNRGAIV
MY+MLCTRPDI Y+V I T VK +LKYLRRT+D MLVYG+KDLILTGYTDSDFQTDK +RKS S VFTLN GA+V
Subjt: MYSMLCTRPDIRYSVEI-------------TTVKNILKYLRRTKDCMLVYGSKDLILTGYTDSDFQTDKYARKSISRLVFTLNRGAIV
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| A0A5A7UYE8 Gag/pol protein | 3.2e-198 | 63.61 | Show/hide |
Query: MVRSMMSFAQLPDSFWGYALETTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNLKKLERRSKLCLFVGYPKESKGGLFYDPQENKVF
MVRSMMS+AQLP SFWGYA+ET ++ILNNVPSKSVSETP+ELW+GRK SL HFRIWGCPAHVLV N KKLE RS+LC FVGYPKE++GGLF+DPQEN+VF
Subjt: MVRSMMSFAQLPDSFWGYALETTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNLKKLERRSKLCLFVGYPKESKGGLFYDPQENKVF
Query: VSTNATFLEEDHIRNHQTRSKLVLEEISKNTT---DRPSSSTKVVDKTRNIGQTHPSQELGEPRRSGRVVRQPDRYL-----------------------
VSTNATFLEEDH+RNH+ RSKLVL E + +T D S++ VD+T GQ+HPSQ L PRRSGRVV QP+RYL
Subjt: VSTNATFLEEDHIRNHQTRSKLVLEEISKNTT---DRPSSSTKVVDKTRNIGQTHPSQELGEPRRSGRVVRQPDRYL-----------------------
Query: ----------------------------------------------------------------GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYE
GYTQ+EG+DYEETFSPVAM+KSIRILLSIATFYDYE
Subjt: ----------------------------------------------------------------GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYE
Query: IWQMDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGND
IWQMDVKT FLNGNLEESI+M L +SIYGLKQASRSWNIRFDTAIKSYGF+QNVDEPCVYK+I VAFLVLYVDDILLIGND
Subjt: IWQMDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGND
Query: VGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSL
VG+LTD+K WLA QFQMKDLG AQYVLGIQI+R+RKNKTLA+SQ +YIDK+L RY MQNSKKGLLP+R+G+HLSKEQ PKTPQEVEDM IPYASAVGSL
Subjt: VGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSL
Query: MYSMLCTRPDIRYSVEI-------------TTVKNILKYLRRTKDCMLVYGSKDLILTGYTDSDFQTDKYARKSISRLVFTLNRGAIV
MY+MLCTRPDI Y+V I T VK +LKYLRRT+D MLVYG+KDLILTGYTDSDFQTDK +RKS S VFTLN GA+V
Subjt: MYSMLCTRPDIRYSVEI-------------TTVKNILKYLRRTKDCMLVYGSKDLILTGYTDSDFQTDKYARKSISRLVFTLNRGAIV
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| A0A5D3BX45 Gag/pol protein | 1.8e-228 | 74.36 | Show/hide |
Query: MVRSMMSFAQLPDSFWGYALETTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNLKKLERRSKLCLFVGYPKESKGGLFYDPQENKVF
MVRSMMSF QLPDSFW YALETTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHV VQN KKLERRSKLCLFVGYPKESKGGLFYDPQENKVF
Subjt: MVRSMMSFAQLPDSFWGYALETTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNLKKLERRSKLCLFVGYPKESKGGLFYDPQENKVF
Query: VSTNATFLEEDHIRNHQTRSKLVLEEISKNTTDRPSSSTKVVDKTRNIGQTHPSQELGEPRRSGRVVRQPDRYL--------------------------
VSTNATFLEEDHIRNHQTRSKLVLEEISKNTTDRPSS TKVVDKTRNIGQTH QELG+PRRSGRVVRQ DRYL
Subjt: VSTNATFLEEDHIRNHQTRSKLVLEEISKNTTDRPSSSTKVVDKTRNIGQTHPSQELGEPRRSGRVVRQPDRYL--------------------------
Query: -------------------------------------------------------------GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYEIWQ
GYTQKEGIDYEE FS AMIKSIRILLSIATFYDYEIWQ
Subjt: -------------------------------------------------------------GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYEIWQ
Query: MDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGNDVGH
MDVKTTFLN NLEESIYM LQKSIYGLKQASRS NIRFDTAIKSYG EQNVDEPCVYKRI+NSTVAFLVLYVDDILLIGNDVGH
Subjt: MDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGNDVGH
Query: LTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYS
L DIKKWLA QFQMKDLGNAQYVLG+QIVRNRKNKTLAMSQTSYIDKMLSRYKM NSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMY
Subjt: LTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYS
Query: MLCTRPDIRYSVEI-------------TTVKNILKYLRRTKDCMLVYGSKDLILTGYTDSDFQTDKYARKSISRLVFTLNRGAIV
MLCTRP+I YSV I TTVKNILKYLRRTKD MLVYGSKDLILTGYTD FQTDK ARKS S LVFT+N GA+V
Subjt: MLCTRPDIRYSVEI-------------TTVKNILKYLRRTKDCMLVYGSKDLILTGYTDSDFQTDKYARKSISRLVFTLNRGAIV
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| E2GK51 Gag/pol protein (Fragment) | 1.3e-215 | 68.89 | Show/hide |
Query: MVRSMMSFAQLPDSFWGYALETTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNLKKLERRSKLCLFVGYPKESKGGLFYDPQENKVF
MVRSMMS+AQLPDSFWGYALET I+ILNNVPSKSV ETPYELWKGRK SLR+FRIWGCPAHVLVQN KKLE RSKLCLFVGYPKES+GGLFY PQENKVF
Subjt: MVRSMMSFAQLPDSFWGYALETTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNLKKLERRSKLCLFVGYPKESKGGLFYDPQENKVF
Query: VSTNATFLEEDHIRNHQTRSKLVLEEISKNTTDRPSSSTKVVDKTRNIGQTHPSQELGEPRRSGRVVRQPDRYL--------------------------
VSTNATFLEEDH RNHQ RSK+VL+E+ KN TD+PSSSTKVVDK Q+H SQEL PRRSGRVV QP+RYL
Subjt: VSTNATFLEEDHIRNHQTRSKLVLEEISKNTTDRPSSSTKVVDKTRNIGQTHPSQELGEPRRSGRVVRQPDRYL--------------------------
Query: -------------------------------------------------------------GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYEIWQ
GYTQKEG+DYEETFSPVAM+KSIRILLSIATFY+YEIWQ
Subjt: -------------------------------------------------------------GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYEIWQ
Query: MDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGNDVGH
MDVKT FLNGNLEESIYM LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYK+I+NS VAFL+LYVDDILLIGNDV +
Subjt: MDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGNDVGH
Query: LTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYS
LTD+KKWL TQFQMKDLG AQY+LGIQIVRNRKNKTLAMSQ SYIDK+LSRYKMQNSKKG LP+R+GIHLSKEQCPKTPQEVEDM NIPY+SAVGSLMY+
Subjt: LTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYS
Query: MLCTRPDIRYSVEI-------------TTVKNILKYLRRTKDCMLVYGSKDLILTGYTDSDFQTDKYARKSISRLVFTLNRGAIV
MLCTRPDI YSV I T VKNILKYLRRT++ MLVYG+KDLILTGYTDSDFQ+DK ARKS S VFTLN GA+V
Subjt: MLCTRPDIRYSVEI-------------TTVKNILKYLRRTKDCMLVYGSKDLILTGYTDSDFQTDKYARKSISRLVFTLNRGAIV
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.3e-47 | 25.5 | Show/hide |
Query: RSMMSFAQLPDSFWGYALETTIYILNNVPSKSV---SETPYELWKGRKGSLRHFRIWGCPAHVLVQNLK-KLERRSKLCLFVGYPKESKGGLFYDPQENK
R+M+S A+L SFWG A+ T Y++N +PS+++ S+TPYE+W +K L+H R++G +V ++N + K + +S +FVGY E G +D K
Subjt: RSMMSFAQLPDSFWGYALETTIYILNNVPSKSV---SETPYELWKGRKGSLRHFRIWGCPAHVLVQNLK-KLERRSKLCLFVGYPKESKGGLFYDPQENK
Query: VFVSTNATFLEEDHIRNHQTRSKLVLEEISKNTTDR--PSSSTKVV-----------------------------DKTRNIGQT----------------
V+ + E + + + + + V + SK + ++ P+ S K++ + +R I QT
Subjt: VFVSTNATFLEEDHIRNHQTRSKLVLEEISKNTTDR--PSSSTKVV-----------------------------DKTRNIGQT----------------
Query: ----------------------HPSQELGEP------------------------------RRSGRVVRQPD----------------------------
+ S+ G P RRS R+ +P
Subjt: ----------------------HPSQELGEP------------------------------RRSGRVVRQPD----------------------------
Query: ----------------------------------------------------------RY------LGYTQKEGIDYEETFSPVAMIKSIRILLSIATFY
RY G+TQK IDYEETF+PVA I S R +LS+ Y
Subjt: ----------------------------------------------------------RY------LGYTQKEGIDYEETFSPVAMIKSIRILLSIATFY
Query: DYEIWQMDVKTTFLNGNLEESIYM---------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVY---KRIINSTVAFLVLYVDDILL
+ ++ QMDVKT FLNG L+E IYM L K+IYGLKQA+R W F+ A+K F + + C+Y K IN + +++LYVDD+++
Subjt: DYEIWQMDVKTTFLNGNLEESIYM---------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVY---KRIINSTVAFLVLYVDDILL
Query: IGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLP----YRYGIHLSKEQCPKTPQEVEDMSNIP
D+ + + K++L +F+M DL ++ +GI+I + + +SQ++Y+ K+LS++ M+N P Y + S E C N P
Subjt: IGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLP----YRYGIHLSKEQCPKTPQEVEDMSNIP
Query: YASAVGSLMYSMLCTRPDIRYSVEITT-------------VKNILKYLRRTKDCMLVYGSKDLI----LTGYTDSDFQTDKYARKSISRLVFTL
S +G LMY MLCTRPD+ +V I + +K +L+YL+ T D L++ K+L + GY DSD+ + RKS + +F +
Subjt: YASAVGSLMYSMLCTRPDIRYSVEITT-------------VKNILKYLRRTKDCMLVYGSKDLI----LTGYTDSDFQTDKYARKSISRLVFTL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.7e-83 | 34.04 | Show/hide |
Query: VRSMMSFAQLPDSFWGYALETTIYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCP--AHVLVQNLKKLERRSKLCLFVGYPKESKGGLFYDPQENK
VRSM+ A+LP SFWG A++T Y++N PS ++ E P +W ++ S H +++GC AHV + KL+ +S C+F+GY E G +DP + K
Subjt: VRSMMSFAQLPDSFWGYALETTIYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCP--AHVLVQNLKKLERRSKLCLFVGYPKESKGGLFYDPQENK
Query: VFVSTNATFLEEDHIRNHQTRSKLVLEEISKN------TTDRPSSSTKVVDKTRNIGQ-------------------THPSQ--ELGEP-RRSGR-----
V S + F E +R S+ V I N T++ P+S+ D+ G+ HP+Q E +P RRS R
Subjt: VFVSTNATFLEEDHIRNHQTRSKLVLEEISKN------TTDRPSSSTKVVDKTRNIGQ-------------------THPSQ--ELGEP-RRSGR-----
Query: ----------------------VVRQPDR--------------------------------------------------------YLGYTQKEGIDYEET
V+ P++ G+ QK+GID++E
Subjt: ----------------------VVRQPDR--------------------------------------------------------YLGYTQKEGIDYEET
Query: FSPVAMIKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVY-
FSPV + SIR +LS+A D E+ Q+DVKT FL+G+LEE IYM L KS+YGLKQA R W ++FD+ +KS + + +PCVY
Subjt: FSPVAMIKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVY-
Query: KRIINSTVAFLVLYVDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKE
KR + L+LYVDD+L++G D G + +K L+ F MKDLG AQ +LG++IVR R ++ L +SQ YI+++L R+ M+N+K P + LSK+
Subjt: KRIINSTVAFLVLYVDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKE
Query: QCPKTPQEVEDMSNIPYASAVGSLMYSMLCTRPDIRYSVEITT-------------VKNILKYLRRTKDCMLVYGSKDLILTGYTDSDFQTDKYARKSIS
CP T +E +M+ +PY+SAVGSLMY+M+CTRPDI ++V + + VK IL+YLR T L +G D IL GYTD+D D RKS +
Subjt: QCPKTPQEVEDMSNIPYASAVGSLMYSMLCTRPDIRYSVEITT-------------VKNILKYLRRTKDCMLVYGSKDLILTGYTDSDFQTDKYARKSIS
Query: RLVFTLNRGAI
+FT + GAI
Subjt: RLVFTLNRGAI
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.3e-18 | 28.74 | Show/hide |
Query: MDVKTTFLNGNLEESIYMLQK-----------------SIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGNDVGH
MDV T FLN ++E IY+ Q +YGLKQA WN + +K GF ++ E +Y R + ++ +YVDD+L+
Subjt: MDVKTTFLNGNLEESIYMLQK-----------------SIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGNDVGH
Query: LTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYS
+K+ L + MKDLG LG+ I N + +S YI K S ++ K P + SK T ++D++ PY S VG L++
Subjt: LTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYS
Query: MLCTRPDIRY-------------SVEITTVKNILKYLRRTKDCMLVYGS-KDLILTGYTDS
RPDI Y ++ + + + +L+YL T+ L Y S L LT Y D+
Subjt: MLCTRPDIRY-------------SVEITTVKNILKYLRRTKDCMLVYGS-KDLILTGYTDS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.3e-31 | 32.68 | Show/hide |
Query: GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSY
GY Q+ G+DY ETFSPV SIRI+L +A + I Q+DV FL G L + +YM L+K++YGLKQA R+W + + +
Subjt: GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSY
Query: GFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGL
GF +V + ++ ++ ++++YVDDIL+ GND L + L+ +F +KD Y LGI+ R L +SQ YI +L+R M +K
Subjt: GFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGL
Query: LPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYSMLCTRPDIRYSV-------------EITTVKNILKYLRRTKD-CMLVYGSKDLILTGYTDS
P LS K E Y VGSL Y + TRPDI Y+V + +K IL+YL T + + + L L Y+D+
Subjt: LPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYSMLCTRPDIRYSV-------------EITTVKNILKYLRRTKD-CMLVYGSKDLILTGYTDS
Query: DFQTDK
D+ DK
Subjt: DFQTDK
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.8e-32 | 32.04 | Show/hide |
Query: GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSY
GY Q+ G+DY ETFSPV SIRI+L +A + I Q+DV FL G L + +YM L+K+IYGLKQA R+W + T + +
Subjt: GYTQKEGIDYEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIYM-----------------LQKSIYGLKQASRSWNIRFDTAIKSY
Query: GFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGL
GF ++ + ++ ++ ++++YVDDIL+ GND L L+ +F +K+ + Y LGI+ R + L +SQ Y +L+R M +K
Subjt: GFEQNVDEPCVYKRIINSTVAFLVLYVDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGL
Query: LPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYSMLCTRPDIRYSV-------------EITTVKNILKYLRRTKD-CMLVYGSKDLILTGYTDS
P L+ K P E Y VGSL Y + TRPD+ Y+V +K +L+YL T D + + L L Y+D+
Subjt: LPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYSMLCTRPDIRYSV-------------EITTVKNILKYLRRTKD-CMLVYGSKDLILTGYTDS
Query: DF--QTDKY
D+ TD Y
Subjt: DF--QTDKY
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