| GenBank top hits | e value | %identity | Alignment |
|---|
| AAO73521.1 gag-pol polyprotein [Glycine max] | 0.0e+00 | 41.7 | Show/hide |
Query: MEIIREGSSASRPPILDGKNYSYWKPRMIFFIKTLDRKAWRALVAGYD-PPMITVNGVLVP--KPEVGWTNAEEQASVGNARALNAIFNGVNLNIFKLIN
M + +EG +RPPILDG NY YWK RM+ F+K+LD + W+A++ G++ P M+ G KPE WT E++ ++GN++ALNA+FNGV+ NIF+LIN
Subjt: MEIIREGSSASRPPILDGKNYSYWKPRMIFFIKTLDRKAWRALVAGYD-PPMITVNGVLVP--KPEVGWTNAEEQASVGNARALNAIFNGVNLNIFKLIN
Query: S-------------SYEGTSKVKIVRLQ----EFLKLQM-----------------NLCCSV-KKISDTKIVRKVLRSLPRKFDMKVTAIEEAHCITTLR
+ ++EGTSKVKI RLQ +F L+M N C ++ ++I+D K+VRK+LRSLP++FDMKVTAIEEA I +R
Subjt: S-------------SYEGTSKVKIVRLQ----EFLKLQM-----------------NLCCSV-KKISDTKIVRKVLRSLPRKFDMKVTAIEEAHCITTLR
Query: LDELFSSLLTFEMATADRENKKGKGIDFKSTHEGEAAVSD--TEANMDESIALLTKQFINVLRKF-----------------------------------
+DEL SL TFE+ +DR KK K + F S EGE D T+ + ++ LL KQF VL +
Subjt: LDELFSSLLTFEMATADRENKKGKGIDFKSTHEGEAAVSD--TEANMDESIALLTKQFINVLRKF-----------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------KNTNATGTMKIL------IEEVMVILKKRKVTRGF--------------------------------------------
K N T ++K+L ++EV+++ K RG
Subjt: ---------------------KNTNATGTMKIL------IEEVMVILKKRKVTRGF--------------------------------------------
Query: -------SGVGNLEV-----------------------------------------------------HMTGNRSYFTNLKDCVTGHVTFSDGAKGKIMA
G+++ HMTG + + N++ C T +VTF DG+KGKI+
Subjt: -------SGVGNLEV-----------------------------------------------------HMTGNRSYFTNLKDCVTGHVTFSDGAKGKIMA
Query: KGNIDKNNLPRLNDVRYVDGLKANLICISQLCDQGYKVSFDDIGCVVMNKENQICMRGKRQTDNCYHWN-SNTSY--TCHLTRSDQTLSNW---------
G + + LP LN V V GL ANLI ISQLCD+G+ V+F C+V N+++++ M+G R DNCY W TSY TC ++ D+ + W
Subjt: KGNIDKNNLPRLNDVRYVDGLKANLICISQLCDQGYKVSFDDIGCVVMNKENQICMRGKRQTDNCYHWN-SNTSY--TCHLTRSDQTLSNW---------
Query: --------------------------------QKTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEICK
++ + +H+ L+ T+RVL+LLHMDLM PMQ ESLGGKRY VVVDD+SR+TWV F++ K++T E+ K
Subjt: --------------------------------QKTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEICK
Query: NLCLKLQREKEKKITRIRSDNGKEFDNEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTRT
L L+LQREK+ I RIRSD+G+EF+N FC EGI HEFSA ITPQQNG+VERKNRTLQE ARVM+HAK LP WAEA+NTAC+IHNRVT+R T
Subjt: NLCLKLQREKEKKITRIRSDNGKEFDNEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTRT
Query: TVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVMID----------EED-ETSNMSEARTT
TLYE+WK RKP+VK+FH+FGS CYILADRE R+K D +S+ GIFLGYS NSRAYRVFN+++ +VME+INV++D EED TS + A
Subjt: TVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVMID----------EED-ETSNMSEARTT
Query: STVE-VSKADNPSDDLGKNLEKPSKEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALKDE--------
+ E +D+ +D+ N+ +P K T+ ++K HP IIGDP+ G+ T+ +E +++V + C+ I+P V AL DE
Subjt: STVE-VSKADNPSDDLGKNLEKPSKEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALKDE--------
Query: ------RNNIWTLVSKPEGVNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLNGYL
RN +W LV +PEG N+IGTKW+FKNKTNE G +T+NKARLVAQGYTQ+EGVDFDETFAPVARLE+IRLLL ++CI KFKLYQMDVKSAFLNGYL
Subjt: ------RNNIWTLVSKPEGVNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLNGYL
Query: NEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQDFVHNFINIMQSEF
NEEVYV QPKGF D HP HVY+L KALYGLKQAPRAWYERLT +L +GY +G IDKTLF+ +++ L++AQIYVDDI+FGG + + +F+ MQSEF
Subjt: NEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQDFVHNFINIMQSEF
Query: EMSMVGELSCFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLTASRPDISYAVGICARYQAD
EMS+VGEL+ FL +YAK+++KKFG+ A +K T TH+KL ++ G VD LYRS+IGSLLYLTASRPDI+YAVG+CARYQA+
Subjt: EMSMVGELSCFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLTASRPDISYAVGICARYQAD
Query: PRISHLEAVKRIL------------------------------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMKNML
P+ISHL VKRIL +KK+NCVSLST EAEYIA GS C+QL+WMK ML
Subjt: PRISHLEAVKRIL------------------------------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMKNML
Query: HEYGFDQDTMMLYCDNMSAVDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHAGLGVC
EY +QD M LYCDNMSA++ISKNPVQHSRTKHIDIRHH+IR+LV++KVI L H+ + Q+ DIFTK LDAN FE L LG+C
Subjt: HEYGFDQDTMMLYCDNMSAVDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHAGLGVC
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| AAO73523.1 gag-pol polyprotein [Glycine max] | 0.0e+00 | 41.71 | Show/hide |
Query: MEIIREGSSASRPPILDGKNYSYWKPRMIFFIKTLDRKAWRALVAGYD-PPMITVNGVLVP--KPEVGWTNAEEQASVGNARALNAIFNGVNLNIFKLIN
M + +EG +RPPILDG NY YWK RM+ F+K+LD + W+A++ G++ P M+ G KPE WT E++ ++GN++ALNA+FNGV+ NIF+LIN
Subjt: MEIIREGSSASRPPILDGKNYSYWKPRMIFFIKTLDRKAWRALVAGYD-PPMITVNGVLVP--KPEVGWTNAEEQASVGNARALNAIFNGVNLNIFKLIN
Query: -------------SSYEGTSKVKIVRLQ----EFLKLQM-----------------NLCCSV-KKISDTKIVRKVLRSLPRKFDMKVTAIEEAHCITTLR
S++EGTSKVK+ RLQ +F L+M N C ++ ++I+D K+VRK+LRSLP++FDMKVTAIEEA I +R
Subjt: -------------SSYEGTSKVKIVRLQ----EFLKLQM-----------------NLCCSV-KKISDTKIVRKVLRSLPRKFDMKVTAIEEAHCITTLR
Query: LDELFSSLLTFEMATADRENKKGKGIDFKSTHEGEAAV--SDTEANMDESIALLTKQFINVLRKF-----------------------------------
+DEL SL TFE+ +DR KK K + F S EGE DT+ + ++ LL KQF VL +
Subjt: LDELFSSLLTFEMATADRENKKGKGIDFKSTHEGEAAV--SDTEANMDESIALLTKQFINVLRKF-----------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------KNTNATGTMKIL------IEEVMVILKKRKVTRGF--------------------------------------------
K N T ++K+L ++EV+++ K RG
Subjt: ---------------------KNTNATGTMKIL------IEEVMVILKKRKVTRGF--------------------------------------------
Query: -------SGVGNLEV-------------------------------------------------------HMTGNRSYFTNLKDCVTGHVTFSDGAKGKI
G+++ HMTG + + N++ C T +VTF DG+KGKI
Subjt: -------SGVGNLEV-------------------------------------------------------HMTGNRSYFTNLKDCVTGHVTFSDGAKGKI
Query: MAKGNIDKNNLPRLNDVRYVDGLKANLICISQLCDQGYKVSFDDIGCVVMNKENQICMRGKRQTDNCYHWN-SNTSY--TCHLTRSDQTLSNW-------
+ G + + LP LN V V GL ANLI ISQLCD+G+ V+F C+V N+++++ M+G R DNCY W TSY TC ++ D+ + W
Subjt: MAKGNIDKNNLPRLNDVRYVDGLKANLICISQLCDQGYKVSFDDIGCVVMNKENQICMRGKRQTDNCYHWN-SNTSY--TCHLTRSDQTLSNW-------
Query: ----------------------------------QKTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEI
++ + +H+ L+ T+RVL+LLHMDLM PMQ ESLGGKRY VVVDD+SR+TWV F++ K+ T E+
Subjt: ----------------------------------QKTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEI
Query: CKNLCLKLQREKEKKITRIRSDNGKEFDNEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIRT
K L L+LQREK+ I RIRSD+G+EF+N F FC EGI HEFSA ITPQQNG+VERKNRTLQE ARVM+HAK LP WAEA+NTAC+IHNRVT+R
Subjt: CKNLCLKLQREKEKKITRIRSDNGKEFDNEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIRT
Query: RTTVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVMID----------EED-ETSNMSEAR
T TLYE+WK RKP+VK+FH+FGS CYILADRE R+K D +S+ GIFLGYS NSRAYRVFN+++ +VME+INV++D EED TS + A
Subjt: RTTVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVMID----------EED-ETSNMSEAR
Query: TTSTVE-VSKADNPSDDLGKNLEKPSKEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALKDE------
+ E +D+ +D+ N+ +P K T+ ++K HP IIGDP+ G+ T+ +E +++V + C+ I+P V AL DE
Subjt: TTSTVE-VSKADNPSDDLGKNLEKPSKEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALKDE------
Query: --------RNNIWTLVSKPEGVNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLNG
RN +W LV +PEG N+IGTKW+FKNKTNE G +T+NKARLVAQGYTQ+EGVDFDETFAPVARLE+IRLLL ++CI KFKLYQMDVKSAFLNG
Subjt: --------RNNIWTLVSKPEGVNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLNG
Query: YLNEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQDFVHNFINIMQS
YLNEEVYV QPKGF D HP HVY+L KALYGLKQAPRAWYERLT +L +GY +G IDKTLF+ +++ L++AQIYVDDI+FGG + + +F+ MQS
Subjt: YLNEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQDFVHNFINIMQS
Query: EFEMSMVGELSCFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLTASRPDISYAVGICARYQ
EFEMS+VGEL+ FL +YAK+++KKFG+ A +K T TH+KL ++ G VD K YRS+IGSLLYLTASRPDI+YAVG+CARYQ
Subjt: EFEMSMVGELSCFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLTASRPDISYAVGICARYQ
Query: ADPRISHLEAVKRIL------------------------------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMKN
A+P+ISHL VKRIL +KK+NCVSLST EAEYIA GS C+QL+WMK
Subjt: ADPRISHLEAVKRIL------------------------------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMKN
Query: MLHEYGFDQDTMMLYCDNMSAVDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHAGLGVC
ML EY +QD M LYCDNMSA++ISKNPVQHSRTKHIDIRHH+IR+LV++KVI L H+ + Q+ DIFTK LDAN FE L LG+C
Subjt: MLHEYGFDQDTMMLYCDNMSAVDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHAGLGVC
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| AAO73527.1 gag-pol polyprotein [Glycine max] | 0.0e+00 | 41.69 | Show/hide |
Query: MEIIREGSSASRPPILDGKNYSYWKPRMIFFIKTLDRKAWRALVAGYD-PPMITVNGVLVP--KPEVGWTNAEEQASVGNARALNAIFNGVNLNIFKLIN
M + +EG +RPPILDG NY YWK RM+ F+K+LD + W+A++ G++ P M+ G KPE WT E++ ++GN++ALNA+FNGV+ NIF+LIN
Subjt: MEIIREGSSASRPPILDGKNYSYWKPRMIFFIKTLDRKAWRALVAGYD-PPMITVNGVLVP--KPEVGWTNAEEQASVGNARALNAIFNGVNLNIFKLIN
Query: S-------------SYEGTSKVKIVRLQ----EFLKLQM-----------------NLCCSV-KKISDTKIVRKVLRSLPRKFDMKVTAIEEAHCITTLR
+ ++EGTSKVK+ RLQ +F L+M N C ++ ++I+D K+VRK+LRSLP++FDMKVTAIEEA I +R
Subjt: S-------------SYEGTSKVKIVRLQ----EFLKLQM-----------------NLCCSV-KKISDTKIVRKVLRSLPRKFDMKVTAIEEAHCITTLR
Query: LDELFSSLLTFEMATADRENKKGKGIDFKSTHEGEAAV--SDTEANMDESIALLTKQFINVLRKF-----------------------------------
+DEL SL TFE+ +DR KK K + F S EGE DT+ + ++ LL KQF VL +
Subjt: LDELFSSLLTFEMATADRENKKGKGIDFKSTHEGEAAV--SDTEANMDESIALLTKQFINVLRKF-----------------------------------
Query: ------------------------------------------KNTNA-TG--------------------------------------------------
++ NA TG
Subjt: ------------------------------------------KNTNA-TG--------------------------------------------------
Query: ----------------------------TMKIL------IEEVMVILKKRKVTRG------FSG------------------------------------
++K+L ++EV+++ K RG F+G
Subjt: ----------------------------TMKIL------IEEVMVILKKRKVTRG------FSG------------------------------------
Query: ---------VGNLEV-------------------------------------------------------HMTGNRSYFTNLKDCVTGHVTFSDGAKGKI
G+++ HMTG + + N++ C T +VTF DG+KGKI
Subjt: ---------VGNLEV-------------------------------------------------------HMTGNRSYFTNLKDCVTGHVTFSDGAKGKI
Query: MAKGNIDKNNLPRLNDVRYVDGLKANLICISQLCDQGYKVSFDDIGCVVMNKENQICMRGKRQTDNCYHWN-SNTSY--TCHLTRSDQTLSNW-------
+ G + + LP LN V V GL ANLI ISQLCD+G+ V+F C+V N+++++ M+G R DNCY W TSY TC ++ D+ + W
Subjt: MAKGNIDKNNLPRLNDVRYVDGLKANLICISQLCDQGYKVSFDDIGCVVMNKENQICMRGKRQTDNCYHWN-SNTSY--TCHLTRSDQTLSNW-------
Query: ----------------------------------QKTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEI
++ + +H+ L+ T+RVL+LLHMDLM PMQ ESLGGKRY VVVDD+SR+TWV F++ K++T E+
Subjt: ----------------------------------QKTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEI
Query: CKNLCLKLQREKEKKITRIRSDNGKEFDNEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIRT
K L L+LQREK+ I RIRSD+G+EF+N F FC EGI HEFSA ITPQQNG+VERKNRTLQE ARVM+HAK LP WAEA+NTAC+IHNRVT+R
Subjt: CKNLCLKLQREKEKKITRIRSDNGKEFDNEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIRT
Query: RTTVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVMIDEEDETSNMSEARTTSTVEVSKAD
T TLYE+WK RKP+VK+FH+FGS CYILADRE R+K D +S+ GIFLGYS NSRAYRVFN+++ +VME+INV++D+ T+ + AD
Subjt: RTTVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVMIDEEDETSNMSEARTTSTVEVSKAD
Query: -NPSDDLGKNLEKPSKEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALKDE--------------RNN
S + +N + + E + + + ++K HP IIGDP+ G+ T+ +E +++V + C+ I+P V AL DE RN
Subjt: -NPSDDLGKNLEKPSKEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALKDE--------------RNN
Query: IWTLVSKPEGVNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQP
+W LV +PEG N+IGTKW+FKNKTNE G +T+NKARLVAQGYTQ+EGVDFDETFAPVARLE+IRLLL ++CI KFKLYQMDVKSAFLNGYLNEEVYV QP
Subjt: IWTLVSKPEGVNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQP
Query: KGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQDFVHNFINIMQSEFEMSMVGELS
KGF D HP HVY+L KALYGLKQAPRAWYERLT +L +GY +G IDKTLF+ +++ L++AQIYVDDI+FGG + + +F+ MQSEFEMS+VGEL+
Subjt: KGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQDFVHNFINIMQSEFEMSMVGELS
Query: CFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLTASRPDISYAVGICARYQADPRISHLEAV
FL +YAK+++KKFG+ A +K T TH+KL ++ G VD LYRS+IGSLLYLTASRPDI+YAVG+CARYQA+P+ISHL V
Subjt: CFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLTASRPDISYAVGICARYQADPRISHLEAV
Query: KRIL------------------------------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMKNMLHEYGFDQDT
KRIL +KK+NCVSLST EAEYIA GS C+QL+WMK ML EY +QD
Subjt: KRIL------------------------------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMKNMLHEYGFDQDT
Query: MMLYCDNMSAVDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHAGLGVC
M LYCDNMSA++ISKNPVQHSRTKHIDIRHH+IR+LV++KVI L H+ + Q+ DIFTK LDAN FE L LG+C
Subjt: MMLYCDNMSAVDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHAGLGVC
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| AAO73529.1 gag-pol polyprotein [Glycine max] | 0.0e+00 | 41.69 | Show/hide |
Query: MEIIREGSSASRPPILDGKNYSYWKPRMIFFIKTLDRKAWRALVAGYD-PPMITVNGVLVP--KPEVGWTNAEEQASVGNARALNAIFNGVNLNIFKLIN
M + +EG +RPPILDG NY YWK RM+ F+K+LD + W+A++ G++ P M+ G KPE WT E++ ++GN++ALNA+FNGV+ NIF+LIN
Subjt: MEIIREGSSASRPPILDGKNYSYWKPRMIFFIKTLDRKAWRALVAGYD-PPMITVNGVLVP--KPEVGWTNAEEQASVGNARALNAIFNGVNLNIFKLIN
Query: -------------SSYEGTSKVKIVRLQ----EFLKLQM-----------------NLCCSV-KKISDTKIVRKVLRSLPRKFDMKVTAIEEAHCITTLR
+++EGTSKVK+ RLQ +F L+M N C ++ ++++D K+VRK+LRSLP++FDMKVTAIEEA I +R
Subjt: -------------SSYEGTSKVKIVRLQ----EFLKLQM-----------------NLCCSV-KKISDTKIVRKVLRSLPRKFDMKVTAIEEAHCITTLR
Query: LDELFSSLLTFEMATADRENKKGKGIDFKSTHEGEAAV--SDTEANMDESIALLTKQFINVLRKF-----------------------------------
+DEL SL TFE+ +DR KK K + F S EGE DT+ + ++ L KQF VL +
Subjt: LDELFSSLLTFEMATADRENKKGKGIDFKSTHEGEAAV--SDTEANMDESIALLTKQFINVLRKF-----------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------KNTNATGTMKIL------IEEVMVILKKRKVTRGF-------------------------------------------
K N T ++K+L +++V+ + KK RG
Subjt: ----------------------KNTNATGTMKIL------IEEVMVILKKRKVTRGF-------------------------------------------
Query: ---------------------------------SG----------VGNLEV--------------------HMTGNRSYFTNLKDCVTGHVTFSDGAKGK
SG + +L V HMTG + + N++ C T +VTF DG+KGK
Subjt: ---------------------------------SG----------VGNLEV--------------------HMTGNRSYFTNLKDCVTGHVTFSDGAKGK
Query: IMAKGNIDKNNLPRLNDVRYVDGLKANLICISQLCDQGYKVSFDDIGCVVMNKENQICMRGKRQTDNCYHW---NSNTSYTCHLTRSDQTLSNW------
I G + LP LN V V GL NLI ISQLCD+G+ V+F C+V N+++++ M+G R DNCY W S+ S TC ++ D+ + W
Subjt: IMAKGNIDKNNLPRLNDVRYVDGLKANLICISQLCDQGYKVSFDDIGCVVMNKENQICMRGKRQTDNCYHW---NSNTSYTCHLTRSDQTLSNW------
Query: -----------------------------------QKTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVE
++ + +H+ L+ T+RVL+LLHMDLM PMQ ESLGGKRY VVVDD+SR+TWV F++ K+DT E
Subjt: -----------------------------------QKTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVE
Query: ICKNLCLKLQREKEKKITRIRSDNGKEFDNEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIR
+ K L L+LQREK+ I RIRSD+G+EF+N F FC EGI HEFSA ITPQQNG+VERKNRTLQE ARVM+HAK LP WAEA+NTAC+IHNRVT+R
Subjt: ICKNLCLKLQREKEKKITRIRSDNGKEFDNEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIR
Query: TRTTVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVMID----------EED-ETSNMSEA
T TLYE+WK RKP VK+FH+FGS CYILADRE R+K D +S+ GIFLGYS NSRAYRVFN+++ +VME+INV++D EED TS + A
Subjt: TRTTVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVMID----------EED-ETSNMSEA
Query: RTTSTVE-VSKADNPSDDLGKNLEKPSKEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALKDE-----
T + E +D+ +D+ N+ +P K ++K HP IIGDP+ G+ T+ +E +++V + C+ I+P V AL DE
Subjt: RTTSTVE-VSKADNPSDDLGKNLEKPSKEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALKDE-----
Query: ---------RNNIWTLVSKPEGVNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLN
RN +W LV +PEG N+IGTKW+FKNKTNE G +T+NKARLVAQGYTQ+EGVDFDETFAPVARLE+IRLLL ++CI KFKLYQMDVKSAFLN
Subjt: ---------RNNIWTLVSKPEGVNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLN
Query: GYLNEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQDFVHNFINIMQ
GYLNEE YV QPKGFVD HP HVY+L KALYGLKQAPRAWYERLT +L +GY +G IDKTLF+ +++ L++AQIYVDDI+FGG + + +F+ MQ
Subjt: GYLNEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQDFVHNFINIMQ
Query: SEFEMSMVGELSCFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLTASRPDISYAVGICARY
SEFEMS+VGEL+ FL KYAK+++KKFG+ A +K T TH+KL ++ G VD LYRS+IGSLLYLTASRPDI+YAVG+CARY
Subjt: SEFEMSMVGELSCFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLTASRPDISYAVGICARY
Query: QADPRISHLEAVKRIL------------------------------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMK
QA+P+ISHL VKRIL +KK+NCVSLST EAEYIA GS C+QL+WMK
Subjt: QADPRISHLEAVKRIL------------------------------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMK
Query: NMLHEYGFDQDTMMLYCDNMSAVDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHAGLGVC
ML EY +QD M LYCDNMSA++ISKNPVQHSRTKHIDIRHH+IRELV++KVI L+H+ + Q+ DIFTK LDA FE L LG+C
Subjt: NMLHEYGFDQDTMMLYCDNMSAVDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHAGLGVC
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| GAU46010.1 hypothetical protein TSUD_401320 [Trifolium subterraneum] | 0.0e+00 | 44.62 | Show/hide |
Query: REGSSASRPPILDGKNYSYWKPRMIFFIKTLDRKAWRALVAGYDPPMI-TVNG--VLVPKPEVGWTNAEEQASVGNARALNAIFNGVNLNIFKLI-----
REG +RPP+LD NY+ WK RMI F+K++D + W+A++ G++ P + NG V KPE WT AE+ ++GN++ALNA+FNGV+ N+F+LI
Subjt: REGSSASRPPILDGKNYSYWKPRMIFFIKTLDRKAWRALVAGYDPPMI-TVNG--VLVPKPEVGWTNAEEQASVGNARALNAIFNGVNLNIFKLI-----
Query: --------NSSYEGTSKVKIVRLQ----EFLKLQMNLCCSV------------------KKISDTKIVRKVLRSLPRKFDMKVTAIEEAHCITTLRLDEL
++ EGT+KVKI RLQ +F L+M SV +K+SD KIVRK+LRSL +KFDMKV A+EEA I+T+++DEL
Subjt: --------NSSYEGTSKVKIVRLQ----EFLKLQMNLCCSV------------------KKISDTKIVRKVLRSLPRKFDMKVTAIEEAHCITTLRLDEL
Query: FSSLLTFEMATADRENKKGKGIDFKSTHEGEAAVSDTEA--NMDESIALLTKQFINVLRKF--------------KNTNATGTMKILIEE----------
SL T+E + +R KK K I F S E SD E+ ++ E+I LL +QF VL++ + N + K I+E
Subjt: FSSLLTFEMATADRENKKGKGIDFKSTHEGEAAVSDTEA--NMDESIALLTKQFINVLRKF--------------KNTNATGTMKILIEE----------
Query: -----------------------VMVILKKRKVTRGFSGVGNLEV-------------------------------------------------------
+ IL+K F G+ V
Subjt: -----------------------VMVILKKRKVTRGFSGVGNLEV-------------------------------------------------------
Query: --------------------------------------HMTGNRSYFTNLKDCVTGHVTFSDGAKGKIMAKGNIDKNNLPRLNDVRYVDGLKANLICISQ
HMTG + ++K T VTF DGAKG+I+ G + NNLP+L++V V GL ANLI ISQ
Subjt: --------------------------------------HMTGNRSYFTNLKDCVTGHVTFSDGAKGKIMAKGNIDKNNLPRLNDVRYVDGLKANLICISQ
Query: LCDQGYKVSFDDIGCVVMNKENQICMRGKRQTDNCYHW--NSNTSYTCHLTRSDQTLSNW----------------------------------------
LCDQG KV+F C+V + + ++ M+G DNCY W +TS + L + + W
Subjt: LCDQGYKVSFDDIGCVVMNKENQICMRGKRQTDNCYHW--NSNTSYTCHLTRSDQTLSNW----------------------------------------
Query: -QKTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEICKNLCLKLQREKEKKITRIRSDNGKEFDNEGFN
++T++ H+ L+ T RVL+LLHMDLM PMQ SLGGKRY VVVDD+SRYTW+ F+K K+DT ++ K+LC++LQREK + I RIRSD+GKEF N F+
Subjt: -QKTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEICKNLCLKLQREKEKKITRIRSDNGKEFDNEGFN
Query: SFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTRTTVTLYELWKERKPNVKYFHVFGSICYILADR
FC EGI HEFS+PITPQQNGVVERKNRTLQE AR M+H K L FWAEA+NTAC+IHNRVT+R+ TT TLYELWK RKP VKYFHVFGS CYIL DR
Subjt: SFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTRTTVTLYELWKERKPNVKYFHVFGSICYILADR
Query: EYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVMIDE--EDETSNMSEARTTSTVEVSKADNPSDD---LGKNLEKPSKEIITKKSELITFA
E R+K D +S++GIFLGYS NSR+YRV+N+++ +ME+INV+ID+ E T+++++ TTS + + + +D + ++ S ++KK I
Subjt: EYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVMIDE--EDETSNMSEARTTSTVEVSKADNPSDD---LGKNLEKPSKEIITKKSELITFA
Query: HVKKNHPTSSIIGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALKDE--------------RNNIWTLVSKPEGVNIIGTKWVFKNKTNEAGC
V+KNHP IIGDPS G+ T+ K + V + C+ I+P V AL DE RN +W LV +PE VN+IGTKWV+KNK++E G
Subjt: HVKKNHPTSSIIGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALKDE--------------RNNIWTLVSKPEGVNIIGTKWVFKNKTNEAGC
Query: VTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAW
VT+NKARLVAQGY Q+EGVDFDETFAPVA LE+IRLLL ++CI KF+L+QMDVKSAFLNGYLNEEVYV QPKGFVD P HVYKL KALYGLKQAPRAW
Subjt: VTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAW
Query: YERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQDFVHNFINIMQSEFEMSMVGELSCFL---------------EKYAKDMIKKF
YERLT +L +GY +G DKTLF+ E +L++AQIYVDDIIFGG V +F+ MQSEFEMS+VGEL+ FL KYAK+++KKF
Subjt: YERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQDFVHNFINIMQSEFEMSMVGELSCFL---------------EKYAKDMIKKF
Query: GLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLTAS------------RPDISYAVGICARYQADPRISHLEAVKRIL-------------
G ++K T ATH+KL ++ +G +VD LY+S+IGSLLYLTAS RPDI++AVG+CARYQA+P+ISHL VKRIL
Subjt: GLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLTAS------------RPDISYAVGICARYQADPRISHLEAVKRIL-------------
Query: -----------------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMKNMLHEYGFDQDTMMLYCDNMSAVDISKNP
+KK+NC+SLST EAEYI GS C+QL+WMK ML EY +QD M LYCDN+SA++ISKNP
Subjt: -----------------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMKNMLHEYGFDQDTMMLYCDNMSAVDISKNP
Query: VQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHAGLGVC
+QHSRTKHIDIRHHFIR LVE KVI L+H+ ++ QL DIFTK LDA FE L + LGVC
Subjt: VQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHAGLGVC
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2Z6P936 Integrase catalytic domain-containing protein | 0.0e+00 | 44.62 | Show/hide |
Query: REGSSASRPPILDGKNYSYWKPRMIFFIKTLDRKAWRALVAGYDPPMI-TVNG--VLVPKPEVGWTNAEEQASVGNARALNAIFNGVNLNIFKLI-----
REG +RPP+LD NY+ WK RMI F+K++D + W+A++ G++ P + NG V KPE WT AE+ ++GN++ALNA+FNGV+ N+F+LI
Subjt: REGSSASRPPILDGKNYSYWKPRMIFFIKTLDRKAWRALVAGYDPPMI-TVNG--VLVPKPEVGWTNAEEQASVGNARALNAIFNGVNLNIFKLI-----
Query: --------NSSYEGTSKVKIVRLQ----EFLKLQMNLCCSV------------------KKISDTKIVRKVLRSLPRKFDMKVTAIEEAHCITTLRLDEL
++ EGT+KVKI RLQ +F L+M SV +K+SD KIVRK+LRSL +KFDMKV A+EEA I+T+++DEL
Subjt: --------NSSYEGTSKVKIVRLQ----EFLKLQMNLCCSV------------------KKISDTKIVRKVLRSLPRKFDMKVTAIEEAHCITTLRLDEL
Query: FSSLLTFEMATADRENKKGKGIDFKSTHEGEAAVSDTEA--NMDESIALLTKQFINVLRKF--------------KNTNATGTMKILIEE----------
SL T+E + +R KK K I F S E SD E+ ++ E+I LL +QF VL++ + N + K I+E
Subjt: FSSLLTFEMATADRENKKGKGIDFKSTHEGEAAVSDTEA--NMDESIALLTKQFINVLRKF--------------KNTNATGTMKILIEE----------
Query: -----------------------VMVILKKRKVTRGFSGVGNLEV-------------------------------------------------------
+ IL+K F G+ V
Subjt: -----------------------VMVILKKRKVTRGFSGVGNLEV-------------------------------------------------------
Query: --------------------------------------HMTGNRSYFTNLKDCVTGHVTFSDGAKGKIMAKGNIDKNNLPRLNDVRYVDGLKANLICISQ
HMTG + ++K T VTF DGAKG+I+ G + NNLP+L++V V GL ANLI ISQ
Subjt: --------------------------------------HMTGNRSYFTNLKDCVTGHVTFSDGAKGKIMAKGNIDKNNLPRLNDVRYVDGLKANLICISQ
Query: LCDQGYKVSFDDIGCVVMNKENQICMRGKRQTDNCYHW--NSNTSYTCHLTRSDQTLSNW----------------------------------------
LCDQG KV+F C+V + + ++ M+G DNCY W +TS + L + + W
Subjt: LCDQGYKVSFDDIGCVVMNKENQICMRGKRQTDNCYHW--NSNTSYTCHLTRSDQTLSNW----------------------------------------
Query: -QKTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEICKNLCLKLQREKEKKITRIRSDNGKEFDNEGFN
++T++ H+ L+ T RVL+LLHMDLM PMQ SLGGKRY VVVDD+SRYTW+ F+K K+DT ++ K+LC++LQREK + I RIRSD+GKEF N F+
Subjt: -QKTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEICKNLCLKLQREKEKKITRIRSDNGKEFDNEGFN
Query: SFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTRTTVTLYELWKERKPNVKYFHVFGSICYILADR
FC EGI HEFS+PITPQQNGVVERKNRTLQE AR M+H K L FWAEA+NTAC+IHNRVT+R+ TT TLYELWK RKP VKYFHVFGS CYIL DR
Subjt: SFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTRTTVTLYELWKERKPNVKYFHVFGSICYILADR
Query: EYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVMIDE--EDETSNMSEARTTSTVEVSKADNPSDD---LGKNLEKPSKEIITKKSELITFA
E R+K D +S++GIFLGYS NSR+YRV+N+++ +ME+INV+ID+ E T+++++ TTS + + + +D + ++ S ++KK I
Subjt: EYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVMIDE--EDETSNMSEARTTSTVEVSKADNPSDD---LGKNLEKPSKEIITKKSELITFA
Query: HVKKNHPTSSIIGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALKDE--------------RNNIWTLVSKPEGVNIIGTKWVFKNKTNEAGC
V+KNHP IIGDPS G+ T+ K + V + C+ I+P V AL DE RN +W LV +PE VN+IGTKWV+KNK++E G
Subjt: HVKKNHPTSSIIGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALKDE--------------RNNIWTLVSKPEGVNIIGTKWVFKNKTNEAGC
Query: VTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAW
VT+NKARLVAQGY Q+EGVDFDETFAPVA LE+IRLLL ++CI KF+L+QMDVKSAFLNGYLNEEVYV QPKGFVD P HVYKL KALYGLKQAPRAW
Subjt: VTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAW
Query: YERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQDFVHNFINIMQSEFEMSMVGELSCFL---------------EKYAKDMIKKF
YERLT +L +GY +G DKTLF+ E +L++AQIYVDDIIFGG V +F+ MQSEFEMS+VGEL+ FL KYAK+++KKF
Subjt: YERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQDFVHNFINIMQSEFEMSMVGELSCFL---------------EKYAKDMIKKF
Query: GLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLTAS------------RPDISYAVGICARYQADPRISHLEAVKRIL-------------
G ++K T ATH+KL ++ +G +VD LY+S+IGSLLYLTAS RPDI++AVG+CARYQA+P+ISHL VKRIL
Subjt: GLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLTAS------------RPDISYAVGICARYQADPRISHLEAVKRIL-------------
Query: -----------------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMKNMLHEYGFDQDTMMLYCDNMSAVDISKNP
+KK+NC+SLST EAEYI GS C+QL+WMK ML EY +QD M LYCDN+SA++ISKNP
Subjt: -----------------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMKNMLHEYGFDQDTMMLYCDNMSAVDISKNP
Query: VQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHAGLGVC
+QHSRTKHIDIRHHFIR LVE KVI L+H+ ++ QL DIFTK LDA FE L + LGVC
Subjt: VQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHAGLGVC
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| Q84VH6 Gag-pol polyprotein | 0.0e+00 | 41.69 | Show/hide |
Query: MEIIREGSSASRPPILDGKNYSYWKPRMIFFIKTLDRKAWRALVAGYD-PPMITVNGVLVP--KPEVGWTNAEEQASVGNARALNAIFNGVNLNIFKLIN
M + +EG +RPPILDG NY YWK RM+ F+K+LD + W+A++ G++ P M+ G KPE WT E++ ++GN++ALNA+FNGV+ NIF+LIN
Subjt: MEIIREGSSASRPPILDGKNYSYWKPRMIFFIKTLDRKAWRALVAGYD-PPMITVNGVLVP--KPEVGWTNAEEQASVGNARALNAIFNGVNLNIFKLIN
Query: -------------SSYEGTSKVKIVRLQ----EFLKLQM-----------------NLCCSV-KKISDTKIVRKVLRSLPRKFDMKVTAIEEAHCITTLR
+++EGTSKVK+ RLQ +F L+M N C ++ ++++D K+VRK+LRSLP++FDMKVTAIEEA I +R
Subjt: -------------SSYEGTSKVKIVRLQ----EFLKLQM-----------------NLCCSV-KKISDTKIVRKVLRSLPRKFDMKVTAIEEAHCITTLR
Query: LDELFSSLLTFEMATADRENKKGKGIDFKSTHEGEAAV--SDTEANMDESIALLTKQFINVLRKF-----------------------------------
+DEL SL TFE+ +DR KK K + F S EGE DT+ + ++ L KQF VL +
Subjt: LDELFSSLLTFEMATADRENKKGKGIDFKSTHEGEAAV--SDTEANMDESIALLTKQFINVLRKF-----------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------KNTNATGTMKIL------IEEVMVILKKRKVTRGF-------------------------------------------
K N T ++K+L +++V+ + KK RG
Subjt: ----------------------KNTNATGTMKIL------IEEVMVILKKRKVTRGF-------------------------------------------
Query: ---------------------------------SG----------VGNLEV--------------------HMTGNRSYFTNLKDCVTGHVTFSDGAKGK
SG + +L V HMTG + + N++ C T +VTF DG+KGK
Subjt: ---------------------------------SG----------VGNLEV--------------------HMTGNRSYFTNLKDCVTGHVTFSDGAKGK
Query: IMAKGNIDKNNLPRLNDVRYVDGLKANLICISQLCDQGYKVSFDDIGCVVMNKENQICMRGKRQTDNCYHW---NSNTSYTCHLTRSDQTLSNW------
I G + LP LN V V GL NLI ISQLCD+G+ V+F C+V N+++++ M+G R DNCY W S+ S TC ++ D+ + W
Subjt: IMAKGNIDKNNLPRLNDVRYVDGLKANLICISQLCDQGYKVSFDDIGCVVMNKENQICMRGKRQTDNCYHW---NSNTSYTCHLTRSDQTLSNW------
Query: -----------------------------------QKTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVE
++ + +H+ L+ T+RVL+LLHMDLM PMQ ESLGGKRY VVVDD+SR+TWV F++ K+DT E
Subjt: -----------------------------------QKTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVE
Query: ICKNLCLKLQREKEKKITRIRSDNGKEFDNEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIR
+ K L L+LQREK+ I RIRSD+G+EF+N F FC EGI HEFSA ITPQQNG+VERKNRTLQE ARVM+HAK LP WAEA+NTAC+IHNRVT+R
Subjt: ICKNLCLKLQREKEKKITRIRSDNGKEFDNEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIR
Query: TRTTVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVMID----------EED-ETSNMSEA
T TLYE+WK RKP VK+FH+FGS CYILADRE R+K D +S+ GIFLGYS NSRAYRVFN+++ +VME+INV++D EED TS + A
Subjt: TRTTVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVMID----------EED-ETSNMSEA
Query: RTTSTVE-VSKADNPSDDLGKNLEKPSKEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALKDE-----
T + E +D+ +D+ N+ +P K ++K HP IIGDP+ G+ T+ +E +++V + C+ I+P V AL DE
Subjt: RTTSTVE-VSKADNPSDDLGKNLEKPSKEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALKDE-----
Query: ---------RNNIWTLVSKPEGVNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLN
RN +W LV +PEG N+IGTKW+FKNKTNE G +T+NKARLVAQGYTQ+EGVDFDETFAPVARLE+IRLLL ++CI KFKLYQMDVKSAFLN
Subjt: ---------RNNIWTLVSKPEGVNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLN
Query: GYLNEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQDFVHNFINIMQ
GYLNEE YV QPKGFVD HP HVY+L KALYGLKQAPRAWYERLT +L +GY +G IDKTLF+ +++ L++AQIYVDDI+FGG + + +F+ MQ
Subjt: GYLNEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQDFVHNFINIMQ
Query: SEFEMSMVGELSCFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLTASRPDISYAVGICARY
SEFEMS+VGEL+ FL KYAK+++KKFG+ A +K T TH+KL ++ G VD LYRS+IGSLLYLTASRPDI+YAVG+CARY
Subjt: SEFEMSMVGELSCFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLTASRPDISYAVGICARY
Query: QADPRISHLEAVKRIL------------------------------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMK
QA+P+ISHL VKRIL +KK+NCVSLST EAEYIA GS C+QL+WMK
Subjt: QADPRISHLEAVKRIL------------------------------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMK
Query: NMLHEYGFDQDTMMLYCDNMSAVDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHAGLGVC
ML EY +QD M LYCDNMSA++ISKNPVQHSRTKHIDIRHH+IRELV++KVI L+H+ + Q+ DIFTK LDA FE L LG+C
Subjt: NMLHEYGFDQDTMMLYCDNMSAVDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHAGLGVC
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| Q84VH8 Gag-pol polyprotein | 0.0e+00 | 41.69 | Show/hide |
Query: MEIIREGSSASRPPILDGKNYSYWKPRMIFFIKTLDRKAWRALVAGYD-PPMITVNGVLVP--KPEVGWTNAEEQASVGNARALNAIFNGVNLNIFKLIN
M + +EG +RPPILDG NY YWK RM+ F+K+LD + W+A++ G++ P M+ G KPE WT E++ ++GN++ALNA+FNGV+ NIF+LIN
Subjt: MEIIREGSSASRPPILDGKNYSYWKPRMIFFIKTLDRKAWRALVAGYD-PPMITVNGVLVP--KPEVGWTNAEEQASVGNARALNAIFNGVNLNIFKLIN
Query: S-------------SYEGTSKVKIVRLQ----EFLKLQM-----------------NLCCSV-KKISDTKIVRKVLRSLPRKFDMKVTAIEEAHCITTLR
+ ++EGTSKVK+ RLQ +F L+M N C ++ ++I+D K+VRK+LRSLP++FDMKVTAIEEA I +R
Subjt: S-------------SYEGTSKVKIVRLQ----EFLKLQM-----------------NLCCSV-KKISDTKIVRKVLRSLPRKFDMKVTAIEEAHCITTLR
Query: LDELFSSLLTFEMATADRENKKGKGIDFKSTHEGEAAV--SDTEANMDESIALLTKQFINVLRKF-----------------------------------
+DEL SL TFE+ +DR KK K + F S EGE DT+ + ++ LL KQF VL +
Subjt: LDELFSSLLTFEMATADRENKKGKGIDFKSTHEGEAAV--SDTEANMDESIALLTKQFINVLRKF-----------------------------------
Query: ------------------------------------------KNTNA-TG--------------------------------------------------
++ NA TG
Subjt: ------------------------------------------KNTNA-TG--------------------------------------------------
Query: ----------------------------TMKIL------IEEVMVILKKRKVTRG------FSG------------------------------------
++K+L ++EV+++ K RG F+G
Subjt: ----------------------------TMKIL------IEEVMVILKKRKVTRG------FSG------------------------------------
Query: ---------VGNLEV-------------------------------------------------------HMTGNRSYFTNLKDCVTGHVTFSDGAKGKI
G+++ HMTG + + N++ C T +VTF DG+KGKI
Subjt: ---------VGNLEV-------------------------------------------------------HMTGNRSYFTNLKDCVTGHVTFSDGAKGKI
Query: MAKGNIDKNNLPRLNDVRYVDGLKANLICISQLCDQGYKVSFDDIGCVVMNKENQICMRGKRQTDNCYHWN-SNTSY--TCHLTRSDQTLSNW-------
+ G + + LP LN V V GL ANLI ISQLCD+G+ V+F C+V N+++++ M+G R DNCY W TSY TC ++ D+ + W
Subjt: MAKGNIDKNNLPRLNDVRYVDGLKANLICISQLCDQGYKVSFDDIGCVVMNKENQICMRGKRQTDNCYHWN-SNTSY--TCHLTRSDQTLSNW-------
Query: ----------------------------------QKTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEI
++ + +H+ L+ T+RVL+LLHMDLM PMQ ESLGGKRY VVVDD+SR+TWV F++ K++T E+
Subjt: ----------------------------------QKTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEI
Query: CKNLCLKLQREKEKKITRIRSDNGKEFDNEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIRT
K L L+LQREK+ I RIRSD+G+EF+N F FC EGI HEFSA ITPQQNG+VERKNRTLQE ARVM+HAK LP WAEA+NTAC+IHNRVT+R
Subjt: CKNLCLKLQREKEKKITRIRSDNGKEFDNEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIRT
Query: RTTVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVMIDEEDETSNMSEARTTSTVEVSKAD
T TLYE+WK RKP+VK+FH+FGS CYILADRE R+K D +S+ GIFLGYS NSRAYRVFN+++ +VME+INV++D+ T+ + AD
Subjt: RTTVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVMIDEEDETSNMSEARTTSTVEVSKAD
Query: -NPSDDLGKNLEKPSKEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALKDE--------------RNN
S + +N + + E + + + ++K HP IIGDP+ G+ T+ +E +++V + C+ I+P V AL DE RN
Subjt: -NPSDDLGKNLEKPSKEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALKDE--------------RNN
Query: IWTLVSKPEGVNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQP
+W LV +PEG N+IGTKW+FKNKTNE G +T+NKARLVAQGYTQ+EGVDFDETFAPVARLE+IRLLL ++CI KFKLYQMDVKSAFLNGYLNEEVYV QP
Subjt: IWTLVSKPEGVNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQP
Query: KGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQDFVHNFINIMQSEFEMSMVGELS
KGF D HP HVY+L KALYGLKQAPRAWYERLT +L +GY +G IDKTLF+ +++ L++AQIYVDDI+FGG + + +F+ MQSEFEMS+VGEL+
Subjt: KGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQDFVHNFINIMQSEFEMSMVGELS
Query: CFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLTASRPDISYAVGICARYQADPRISHLEAV
FL +YAK+++KKFG+ A +K T TH+KL ++ G VD LYRS+IGSLLYLTASRPDI+YAVG+CARYQA+P+ISHL V
Subjt: CFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLTASRPDISYAVGICARYQADPRISHLEAV
Query: KRIL------------------------------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMKNMLHEYGFDQDT
KRIL +KK+NCVSLST EAEYIA GS C+QL+WMK ML EY +QD
Subjt: KRIL------------------------------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMKNMLHEYGFDQDT
Query: MMLYCDNMSAVDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHAGLGVC
M LYCDNMSA++ISKNPVQHSRTKHIDIRHH+IR+LV++KVI L H+ + Q+ DIFTK LDAN FE L LG+C
Subjt: MMLYCDNMSAVDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHAGLGVC
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| Q84VI2 Gag-pol polyprotein | 0.0e+00 | 41.71 | Show/hide |
Query: MEIIREGSSASRPPILDGKNYSYWKPRMIFFIKTLDRKAWRALVAGYD-PPMITVNGVLVP--KPEVGWTNAEEQASVGNARALNAIFNGVNLNIFKLIN
M + +EG +RPPILDG NY YWK RM+ F+K+LD + W+A++ G++ P M+ G KPE WT E++ ++GN++ALNA+FNGV+ NIF+LIN
Subjt: MEIIREGSSASRPPILDGKNYSYWKPRMIFFIKTLDRKAWRALVAGYD-PPMITVNGVLVP--KPEVGWTNAEEQASVGNARALNAIFNGVNLNIFKLIN
Query: -------------SSYEGTSKVKIVRLQ----EFLKLQM-----------------NLCCSV-KKISDTKIVRKVLRSLPRKFDMKVTAIEEAHCITTLR
S++EGTSKVK+ RLQ +F L+M N C ++ ++I+D K+VRK+LRSLP++FDMKVTAIEEA I +R
Subjt: -------------SSYEGTSKVKIVRLQ----EFLKLQM-----------------NLCCSV-KKISDTKIVRKVLRSLPRKFDMKVTAIEEAHCITTLR
Query: LDELFSSLLTFEMATADRENKKGKGIDFKSTHEGEAAV--SDTEANMDESIALLTKQFINVLRKF-----------------------------------
+DEL SL TFE+ +DR KK K + F S EGE DT+ + ++ LL KQF VL +
Subjt: LDELFSSLLTFEMATADRENKKGKGIDFKSTHEGEAAV--SDTEANMDESIALLTKQFINVLRKF-----------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------KNTNATGTMKIL------IEEVMVILKKRKVTRGF--------------------------------------------
K N T ++K+L ++EV+++ K RG
Subjt: ---------------------KNTNATGTMKIL------IEEVMVILKKRKVTRGF--------------------------------------------
Query: -------SGVGNLEV-------------------------------------------------------HMTGNRSYFTNLKDCVTGHVTFSDGAKGKI
G+++ HMTG + + N++ C T +VTF DG+KGKI
Subjt: -------SGVGNLEV-------------------------------------------------------HMTGNRSYFTNLKDCVTGHVTFSDGAKGKI
Query: MAKGNIDKNNLPRLNDVRYVDGLKANLICISQLCDQGYKVSFDDIGCVVMNKENQICMRGKRQTDNCYHWN-SNTSY--TCHLTRSDQTLSNW-------
+ G + + LP LN V V GL ANLI ISQLCD+G+ V+F C+V N+++++ M+G R DNCY W TSY TC ++ D+ + W
Subjt: MAKGNIDKNNLPRLNDVRYVDGLKANLICISQLCDQGYKVSFDDIGCVVMNKENQICMRGKRQTDNCYHWN-SNTSY--TCHLTRSDQTLSNW-------
Query: ----------------------------------QKTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEI
++ + +H+ L+ T+RVL+LLHMDLM PMQ ESLGGKRY VVVDD+SR+TWV F++ K+ T E+
Subjt: ----------------------------------QKTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEI
Query: CKNLCLKLQREKEKKITRIRSDNGKEFDNEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIRT
K L L+LQREK+ I RIRSD+G+EF+N F FC EGI HEFSA ITPQQNG+VERKNRTLQE ARVM+HAK LP WAEA+NTAC+IHNRVT+R
Subjt: CKNLCLKLQREKEKKITRIRSDNGKEFDNEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIRT
Query: RTTVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVMID----------EED-ETSNMSEAR
T TLYE+WK RKP+VK+FH+FGS CYILADRE R+K D +S+ GIFLGYS NSRAYRVFN+++ +VME+INV++D EED TS + A
Subjt: RTTVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVMID----------EED-ETSNMSEAR
Query: TTSTVE-VSKADNPSDDLGKNLEKPSKEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALKDE------
+ E +D+ +D+ N+ +P K T+ ++K HP IIGDP+ G+ T+ +E +++V + C+ I+P V AL DE
Subjt: TTSTVE-VSKADNPSDDLGKNLEKPSKEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALKDE------
Query: --------RNNIWTLVSKPEGVNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLNG
RN +W LV +PEG N+IGTKW+FKNKTNE G +T+NKARLVAQGYTQ+EGVDFDETFAPVARLE+IRLLL ++CI KFKLYQMDVKSAFLNG
Subjt: --------RNNIWTLVSKPEGVNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLNG
Query: YLNEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQDFVHNFINIMQS
YLNEEVYV QPKGF D HP HVY+L KALYGLKQAPRAWYERLT +L +GY +G IDKTLF+ +++ L++AQIYVDDI+FGG + + +F+ MQS
Subjt: YLNEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQDFVHNFINIMQS
Query: EFEMSMVGELSCFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLTASRPDISYAVGICARYQ
EFEMS+VGEL+ FL +YAK+++KKFG+ A +K T TH+KL ++ G VD K YRS+IGSLLYLTASRPDI+YAVG+CARYQ
Subjt: EFEMSMVGELSCFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLTASRPDISYAVGICARYQ
Query: ADPRISHLEAVKRIL------------------------------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMKN
A+P+ISHL VKRIL +KK+NCVSLST EAEYIA GS C+QL+WMK
Subjt: ADPRISHLEAVKRIL------------------------------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMKN
Query: MLHEYGFDQDTMMLYCDNMSAVDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHAGLGVC
ML EY +QD M LYCDNMSA++ISKNPVQHSRTKHIDIRHH+IR+LV++KVI L H+ + Q+ DIFTK LDAN FE L LG+C
Subjt: MLHEYGFDQDTMMLYCDNMSAVDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHAGLGVC
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| Q84VI4 Gag-pol polyprotein | 0.0e+00 | 41.7 | Show/hide |
Query: MEIIREGSSASRPPILDGKNYSYWKPRMIFFIKTLDRKAWRALVAGYD-PPMITVNGVLVP--KPEVGWTNAEEQASVGNARALNAIFNGVNLNIFKLIN
M + +EG +RPPILDG NY YWK RM+ F+K+LD + W+A++ G++ P M+ G KPE WT E++ ++GN++ALNA+FNGV+ NIF+LIN
Subjt: MEIIREGSSASRPPILDGKNYSYWKPRMIFFIKTLDRKAWRALVAGYD-PPMITVNGVLVP--KPEVGWTNAEEQASVGNARALNAIFNGVNLNIFKLIN
Query: S-------------SYEGTSKVKIVRLQ----EFLKLQM-----------------NLCCSV-KKISDTKIVRKVLRSLPRKFDMKVTAIEEAHCITTLR
+ ++EGTSKVKI RLQ +F L+M N C ++ ++I+D K+VRK+LRSLP++FDMKVTAIEEA I +R
Subjt: S-------------SYEGTSKVKIVRLQ----EFLKLQM-----------------NLCCSV-KKISDTKIVRKVLRSLPRKFDMKVTAIEEAHCITTLR
Query: LDELFSSLLTFEMATADRENKKGKGIDFKSTHEGEAAVSD--TEANMDESIALLTKQFINVLRKF-----------------------------------
+DEL SL TFE+ +DR KK K + F S EGE D T+ + ++ LL KQF VL +
Subjt: LDELFSSLLTFEMATADRENKKGKGIDFKSTHEGEAAVSD--TEANMDESIALLTKQFINVLRKF-----------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------KNTNATGTMKIL------IEEVMVILKKRKVTRGF--------------------------------------------
K N T ++K+L ++EV+++ K RG
Subjt: ---------------------KNTNATGTMKIL------IEEVMVILKKRKVTRGF--------------------------------------------
Query: -------SGVGNLEV-----------------------------------------------------HMTGNRSYFTNLKDCVTGHVTFSDGAKGKIMA
G+++ HMTG + + N++ C T +VTF DG+KGKI+
Subjt: -------SGVGNLEV-----------------------------------------------------HMTGNRSYFTNLKDCVTGHVTFSDGAKGKIMA
Query: KGNIDKNNLPRLNDVRYVDGLKANLICISQLCDQGYKVSFDDIGCVVMNKENQICMRGKRQTDNCYHWN-SNTSY--TCHLTRSDQTLSNW---------
G + + LP LN V V GL ANLI ISQLCD+G+ V+F C+V N+++++ M+G R DNCY W TSY TC ++ D+ + W
Subjt: KGNIDKNNLPRLNDVRYVDGLKANLICISQLCDQGYKVSFDDIGCVVMNKENQICMRGKRQTDNCYHWN-SNTSY--TCHLTRSDQTLSNW---------
Query: --------------------------------QKTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEICK
++ + +H+ L+ T+RVL+LLHMDLM PMQ ESLGGKRY VVVDD+SR+TWV F++ K++T E+ K
Subjt: --------------------------------QKTRSTHKSLKECYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEICK
Query: NLCLKLQREKEKKITRIRSDNGKEFDNEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTRT
L L+LQREK+ I RIRSD+G+EF+N FC EGI HEFSA ITPQQNG+VERKNRTLQE ARVM+HAK LP WAEA+NTAC+IHNRVT+R T
Subjt: NLCLKLQREKEKKITRIRSDNGKEFDNEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTRT
Query: TVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVMID----------EED-ETSNMSEARTT
TLYE+WK RKP+VK+FH+FGS CYILADRE R+K D +S+ GIFLGYS NSRAYRVFN+++ +VME+INV++D EED TS + A
Subjt: TVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRVFNNKSVSVMETINVMID----------EED-ETSNMSEARTT
Query: STVE-VSKADNPSDDLGKNLEKPSKEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALKDE--------
+ E +D+ +D+ N+ +P K T+ ++K HP IIGDP+ G+ T+ +E +++V + C+ I+P V AL DE
Subjt: STVE-VSKADNPSDDLGKNLEKPSKEIITKKSELITFAHVKKNHPTSSIIGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALKDE--------
Query: ------RNNIWTLVSKPEGVNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLNGYL
RN +W LV +PEG N+IGTKW+FKNKTNE G +T+NKARLVAQGYTQ+EGVDFDETFAPVARLE+IRLLL ++CI KFKLYQMDVKSAFLNGYL
Subjt: ------RNNIWTLVSKPEGVNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLNGYL
Query: NEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQDFVHNFINIMQSEF
NEEVYV QPKGF D HP HVY+L KALYGLKQAPRAWYERLT +L +GY +G IDKTLF+ +++ L++AQIYVDDI+FGG + + +F+ MQSEF
Subjt: NEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQDFVHNFINIMQSEF
Query: EMSMVGELSCFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLTASRPDISYAVGICARYQAD
EMS+VGEL+ FL +YAK+++KKFG+ A +K T TH+KL ++ G VD LYRS+IGSLLYLTASRPDI+YAVG+CARYQA+
Subjt: EMSMVGELSCFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLTASRPDISYAVGICARYQAD
Query: PRISHLEAVKRIL------------------------------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMKNML
P+ISHL VKRIL +KK+NCVSLST EAEYIA GS C+QL+WMK ML
Subjt: PRISHLEAVKRIL------------------------------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMKNML
Query: HEYGFDQDTMMLYCDNMSAVDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHAGLGVC
EY +QD M LYCDNMSA++ISKNPVQHSRTKHIDIRHH+IR+LV++KVI L H+ + Q+ DIFTK LDAN FE L LG+C
Subjt: HEYGFDQDTMMLYCDNMSAVDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHAGLGVC
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 9.6e-92 | 27.64 | Show/hide |
Query: NWQKTRSTHKSLKE-CYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEICKNLCLKLQREKEKKITRIRSDNGKEFDNEG
N ++ R K LK+ + R L ++H D+ P+ +L K Y ++ VD ++ Y + +K K+D + ++ K + K+ + DNG+E+ +
Subjt: NWQKTRSTHKSLKE-CYTNRVLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEICKNLCLKLQREKEKKITRIRSDNGKEFDNEG
Query: FNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIR--TRTTVTLYELWKERKPNVKYFHVFGSICYI
FC+ +GI + + P TPQ NGV ER RT+ E AR M+ L FW EAV TA ++ NR+ R ++ T YE+W +KP +K+ VFG+ Y+
Subjt: FNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIR--TRTTVTLYELWKERKPNVKYFHVFGSICYI
Query: LADREYRQKWDARSEQGIFLGYSQNS-RAYRVFNNKSVSV-----------------METINVMIDEEDETSNM-------------SEARTTSTVEVSK
+ + K+D +S + IF+GY N + + N K + ET+ + +E E N +E++ ++ K
Subjt: LADREYRQKWDARSEQGIFLGYSQNS-RAYRVFNNKSVSV-----------------METINVMIDEEDETSNM-------------SEARTTSTVEVSK
Query: ADNPSDDLGKNLEKPSKEII-------------------------------------------------TKKSELITFAHVKK---NHPTSS----IIGD
S++ KN S++II + E T H+K+ ++PT + II
Subjt: ADNPSDDLGKNLEKPSKEII-------------------------------------------------TKKSELITFAHVKK---NHPTSS----IIGD
Query: PSAGMQTK-----RKEKIVYLKMVDDLCYTFTIKPSTVDS-ALKDER----------------NNIWTLVSKPEGVNIIGTKWVFKNKTNEAGCVTKNKA
S ++TK +E K+V + F P++ D +D++ NN WT+ +PE NI+ ++WVF K NE G + KA
Subjt: PSAGMQTK-----RKEKIVYLKMVDDLCYTFTIKPSTVDS-ALKDER----------------NNIWTLVSKPEGVNIIGTKWVFKNKTNEAGCVTKNKA
Query: RLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTI
RLVA+G+TQ +D++ETFAPVAR+ + R +L + K++QMDVK+AFLNG L EE+Y+ P+G S + +V KL+KA+YGLKQA R W+E
Subjt: RLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTI
Query: YLRGKGYSRGEIDKTLFIHRES--NQLLVAQIYVDDIIFGGFPQDFVHNFINIMQSEFEMSMVGELSCFL---------------EKYAKDMIKKFGLGQ
L+ + +D+ ++I + N+ + +YVDD++ ++NF + +F M+ + E+ F+ Y K ++ KF +
Subjt: YLRGKGYSRGEIDKTLFIHRES--NQLLVAQIYVDDIIFGGFPQDFVHNFINIMQSEFEMSMVGELSCFL---------------EKYAKDMIKKFGLGQ
Query: AQNKWTLTATHVKL-IRNTDGAEVDHKLYRSIIGSLLY-LTASRPDISYAVGICARYQADPRISHLEAVKRIL---------------------------
T + + + N+D E + RS+IG L+Y + +RPD++ AV I +RY + + +KR+L
Subjt: AQNKWTLTATHVKL-IRNTDGAEVDHKLYRSIIGSLLY-LTASRPDISYAVGICARYQADPRISHLEAVKRIL---------------------------
Query: ------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMKNMLHEYGFD-QDTMMLYCDNMSAVDISKNPVQHSRTKHID
K++N V+ S+ EAEY+A+ + +W+K +L ++ + +Y DN + I+ NP H R KHID
Subjt: ------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMKNMLHEYGFD-QDTMMLYCDNMSAVDISKNPVQHSRTKHID
Query: IRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHAGLGV
I++HF RE V+N VI L++I + QL DIFTKPL A F L LG+
Subjt: IRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHAGLGV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.1e-111 | 30.02 | Show/hide |
Query: VLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEICKNLCLKLQREKEKKITRIRSDNGKEFDNEGFNSFCLLEGIHHEFSAPITP
+L L++ D+ PM+ ES+GG +Y + +DD SR WV+ LK K ++ + ++RE +K+ R+RSDNG E+ + F +C GI HE + P TP
Subjt: VLKLLHMDLMRPMQTESLGGKRYVLVVVDDYSRYTWVFFLKGKTDTVEICKNLCLKLQREKEKKITRIRSDNGKEFDNEGFNSFCLLEGIHHEFSAPITP
Query: QQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTRTTVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGY
Q NGV ER NRT+ E R M+ LP FW EAV TAC++ NR +W ++ + + VFG + +E R K D +S IF+GY
Subjt: QQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTRTTVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGY
Query: SQNSRAYRVFNNKSVSVMETINVMIDEED--ETSNMSEARTTSTV-----------EVSKADNPSDDLGKNLEKPSKEIITKKSELITFAHVKKNHPTSS
YR+++ V+ + +V+ E + ++MSE + + A++ +D++ + E+P + + ++ E + + HPT
Subjt: SQNSRAYRVFNNKSVSVMETINVMIDEED--ETSNMSEARTTSTV-----------EVSKADNPSDDLGKNLEKPSKEIITKKSELITFAHVKKNHPTSS
Query: ------IIGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALKD-----------------ERNNIWTLVSKPEGVNIIGTKWVFKNKTNEAGCV
+ ++++R Y+ + DD +P ++ L ++N + LV P+G + KWVFK K + +
Subjt: ------IIGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALKD-----------------ERNNIWTLVSKPEGVNIIGTKWVFKNKTNEAGCV
Query: TKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAWY
+ KARLV +G+ Q +G+DFDE F+PV ++ +IR +L ++ ++ Q+DVK+AFL+G L EE+Y+ QP+GF + V KL+K+LYGLKQAPR WY
Subjt: TKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAWY
Query: ERLTIYLRGKGYSRGEIDKTLFIHRES-NQLLVAQIYVDDIIFGGFPQDFVHNFINIMQSEFEMSMVGELSCFL-----------------EKYAKDMIK
+ +++ + Y + D ++ R S N ++ +YVDD++ G + + + F+M +G L EKY + +++
Subjt: ERLTIYLRGKGYSRGEIDKTLFIHRES-NQLLVAQIYVDDIIFGGFPQDFVHNFINIMQSEFEMSMVGELSCFL-----------------EKYAKDMIK
Query: KFGLGQAQNKWTLTATHVKLIRNTDGAEVDHK------LYRSIIGSLLY-LTASRPDISYAVGICARYQADPRISHLEAVKRIL----------------
+F + A+ T A H+KL + V+ K Y S +GSL+Y + +RPDI++AVG+ +R+ +P H EAVK IL
Subjt: KFGLGQAQNKWTLTATHVKLIRNTDGAEVDHK------LYRSIIGSLLY-LTASRPDISYAVGICARYQADPRISHLEAVKRIL----------------
Query: -------------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMKNMLHEYGFDQDTMMLYCDNMSAVDISKNPVQHS
+K + CV+LST EAEYIA ++IW+K L E G Q ++YCD+ SA+D+SKN + H+
Subjt: -------------------------------------NKKRNCVSLSTVEAEYIAVGSGCTQLIWMKNMLHEYGFDQDTMMLYCDNMSAVDISKNPVQHS
Query: RTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFE
RTKHID+R+H+IRE+V+++ +++ I +N D+ TK + N FE
Subjt: RTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFE
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.5e-23 | 31.72 | Show/hide |
Query: MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQDF
MDV +AFLN ++E +YV QP GFV+ +P +V++L +YGLKQAP W E + L+ G+ R E + L+ S+ + +YVDD++
Subjt: MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQDF
Query: VHNFINIMQSEFEMSMVGELSCFL------------EKYAKDMIKKFGLGQAQNKWTLTATHV----KLIRNTDGAEVDHKLYRSIIGSLLY-LTASRPD
+ + M +G++ FL +D I K N + LT T + L T D Y+SI+G LL+ RPD
Subjt: VHNFINIMQSEFEMSMVGELSCFL------------EKYAKDMIKKFGLGQAQNKWTLTATHV----KLIRNTDGAEVDHKLYRSIIGSLLY-LTASRPD
Query: ISYAVGICARYQADPRISHLEAVKRIL
ISY V + +R+ +PR HLE+ +R+L
Subjt: ISYAVGICARYQADPRISHLEAVKRIL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.9e-88 | 26.76 | Show/hide |
Query: VTFSDGAKGKIMAKGNIDKNNLPR---LNDVRYVDGLKANLICISQLCD-QGYKVSFDDIGCVVMNKENQICMRGKRQTDNCYHWNSNTSYTCHL---TR
V +DG+ I G+ + R L+++ YV + NLI + +LC+ G V F V + + + + D Y W +S L
Subjt: VTFSDGAKGKIMAKGNIDKNNLPR---LNDVRYVDGLKANLICISQLCD-QGYKVSFDDIGCVVMNKENQICMRGKRQTDNCYHWNSNTSYTCHL---TR
Query: SDQTLSNWQK---------------------TRSTHK--SLKECYTNRVLKL----LHMDLMRPMQ----------TESLGGKRYVLVVVDDYSRYTWVF
S T S+W +HK S +C N+ K+ ++ RP++ S RY ++ VD ++RYTW++
Subjt: SDQTLSNWQK---------------------TRSTHK--SLKECYTNRVLKL----LHMDLMRPMQ----------TESLGGKRYVLVVVDDYSRYTWVF
Query: FLKGKTDTVEICKNLCLKLQREKEKKITRIRSDNGKEFDNEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTA
LK K+ E L+ + +I SDNG EF + GI H S P TP+ NG+ ERK+R + E ++ ++P +W A A
Subjt: FLKGKTDTVEICKNLCLKLQREKEKKITRIRSDNGKEFDNEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAVNTA
Query: CHIHNRVTIRTRTTVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAY--------RVFNNKSV----------SVMET
++ NR+ + ++ PN VFG CY + K D +S Q +FLGYS AY R++ ++ V + + T
Subjt: CHIHNRVTIRTRTTVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAY--------RVFNNKSV----------SVMET
Query: INVMIDEEDETSNMSEARTT--------------------------------STVEVSKAD---------------------------------------
++ + ++ E+S + TT S V S D
Subjt: INVMIDEEDETSNMSEARTT--------------------------------STVEVSKAD---------------------------------------
Query: ----NPSDD----LGKNLEKPSKEIITKKSELITFAHVKKNHPT--SSIIGDP----------------SAGMQTKRKEKIVYLKMVDDLCYTFTI--KP
NP+++ L ++L P++ + S T A PT S +I P + M T+ K I+ L + +P
Subjt: ----NPSDD----LGKNLEKPSKEIITKKSELITFAHVKKNHPT--SSIIGDP----------------SAGMQTKRKEKIVYLKMVDDLCYTFTI--KP
Query: STVDSALKDER--------------NNIWTLVSKPEG-VNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCI
T ALKDER N+ W LV P V I+G +W+F K N G + + KARLVA+GY Q G+D+ ETF+PV + +IR++L ++
Subjt: STVDSALKDER--------------NNIWTLVSKPEG-VNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCI
Query: QKFKLYQMDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIF
+ + + Q+DV +AFL G L ++VY++QP GF+D + P +V KL KALYGLKQAPRAWY L YL G+ D +LF+ + ++ +YVDDI+
Subjt: QKFKLYQMDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIF
Query: GGFPQDFVHNFINIMQSEFEMSMVGELSCFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLT
G +HN ++ + F + EL FL +Y D++ + + A+ T A KL + D YR I+GSL YL
Subjt: GGFPQDFVHNFINIMQSEFEMSMVGELSCFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLT
Query: ASRPDISYAVGICARYQADPRISHLEAVKRILN------------KKRNCVSL------------------------------------------STVEA
+RPDISYAV +++ P HL+A+KRIL KK N +SL S+ EA
Subjt: ASRPDISYAVGICARYQADPRISHLEAVKRILN------------KKRNCVSL------------------------------------------STVEA
Query: EYIAVGSGCTQLIWMKNMLHEYGFD-QDTMMLYCDNMSAVDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHA
EY +V + +++ W+ ++L E G ++YCDN+ A + NPV HSR KHI I +HFIR V++ +R+ H+ ++ QL D TKPL +F+ +
Subjt: EYIAVGSGCTQLIWMKNMLHEYGFD-QDTMMLYCDNMSAVDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDANSFEYLHA
Query: GLGVCR
+GV R
Subjt: GLGVCR
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.2e-87 | 26.3 | Show/hide |
Query: VTFSDGAKGKIMAKGNIDKNNLPR---LNDVRYVDGLKANLICISQLCDQG-YKVSFDDIGCVVMNKENQICMRGKRQTDNCYHWNSNTSYTCHLTR---
V +DG+ I G+ R LN V YV + NLI + +LC+ V F V + + + + D Y W +S +
Subjt: VTFSDGAKGKIMAKGNIDKNNLPR---LNDVRYVDGLKANLICISQLCDQG-YKVSFDDIGCVVMNKENQICMRGKRQTDNCYHWNSNTSYTCHLTR---
Query: SDQTLSNWQK---------------------TRSTHK--SLKECYTNRVLKL----LHMDLMRPMQ----------TESLGGKRYVLVVVDDYSRYTWVF
S T S+W +HK S +C+ N+ K+ + +P++ S+ RY ++ VD ++RYTW++
Subjt: SDQTLSNWQK---------------------TRSTHK--SLKECYTNRVLKL----LHMDLMRPMQ----------TESLGGKRYVLVVVDDYSRYTWVF
Query: FLKGKT---DTVEICKNLCLKLQREKEKKITRIRSDNGKEFDNEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAV
LK K+ DT I K+L ++ + +I + SDNG EF + GI H S P TP+ NG+ ERK+R + EM ++ ++P +W A
Subjt: FLKGKT---DTVEICKNLCLKLQREKEKKITRIRSDNGKEFDNEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAV
Query: NTACHIHNRVTIRTRTTVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAY--------RVFNNKSVSVME------TI
+ A ++ NR+ + ++ + PN + VFG CY R K + +S+Q F+GYS AY R++ ++ V E T
Subjt: NTACHIHNRVTIRTRTTVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAY--------RVFNNKSVSVME------TI
Query: NVMIDEEDETSNMSEARTTS-----------------------------------TVEVSKADNPSDDLGK-----------------------------
N + E + S S T +VS ++ PS +
Subjt: NVMIDEEDETSNMSEARTTS-----------------------------------TVEVSKADNPSDDLGK-----------------------------
Query: -------NLEKPSKEIITKKSEL----ITFAHV--------KKNHPTSSIIGDP---------------------SAGMQTKRKEKIVYLKMVDDLCYTF
N PS + S L I+ H+ + N P+SS P + M T+ K+ I K Y
Subjt: -------NLEKPSKEIITKKSEL----ITFAHV--------KKNHPTSSIIGDP---------------------SAGMQTKRKEKIVYLKMVDDLCYTF
Query: TI----KPSTVDSALKDER--------------NNIWTLV-SKPEGVNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIR
++ +P T A+KD+R N+ W LV P V I+G +W+F K N G + + KARLVA+GY Q G+D+ ETF+PV + +IR
Subjt: TI----KPSTVDSALKDER--------------NNIWTLV-SKPEGVNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIR
Query: LLLDISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQ
++L ++ + + + Q+DV +AFL G L +EVY++QP GFVD + P +V +L KA+YGLKQAPRAWY L YL G+ D +LF+ + ++
Subjt: LLLDISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQ
Query: IYVDDIIFGGFPQDFVHNFINIMQSEFEMSMVGELSCFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSI
+YVDDI+ G + + ++ + F + +L FL +Y D++ + + A+ T AT KL ++ D YR I
Subjt: IYVDDIIFGGFPQDFVHNFINIMQSEFEMSMVGELSCFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSI
Query: IGSLLYLTASRPDISYAVGICARYQADPRISHLEAVKRILN------------KKRNCVSL---------------------------------------
+GSL YL +RPD+SYAV ++Y P H A+KR+L KK N +SL
Subjt: IGSLLYLTASRPDISYAVGICARYQADPRISHLEAVKRILN------------KKRNCVSL---------------------------------------
Query: ---STVEAEYIAVGSGCTQLIWMKNMLHEYGFD-QDTMMLYCDNMSAVDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDA
S+ EAEY +V + ++L W+ ++L E G ++YCDN+ A + NPV HSR KHI + +HFIR V++ +R+ H+ ++ QL D TKPL
Subjt: ---STVEAEYIAVGSGCTQLIWMKNMLHEYGFD-QDTMMLYCDNMSAVDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIHSNLQLVDIFTKPLDA
Query: NSFEYLHAGLGVCR
+F+ +GV +
Subjt: NSFEYLHAGLGVCR
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.3e-59 | 29.21 | Show/hide |
Query: SNMSEARTTSTVEVSKADNPSDDLGKNLEKPSKEIITKKSELITFAHVKKNHPTSSI-IGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALK-
S+ + ++S++++ PS ++ ++ +PS +++ + H +S+ I D S + ++ + + +V C +PST + A +
Subjt: SNMSEARTTSTVEVSKADNPSDDLGKNLEKPSKEIITKKSELITFAHVKKNHPTSSI-IGDPSAGMQTKRKEKIVYLKMVDDLCYTFTIKPSTVDSALK-
Query: -------------DERNNIWTLVSKPEGVNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDV
E + W + + P IG KWV+K K N G + + KARLVA+GYTQ EG+DF ETF+PV +L +++L+L IS I F L+Q+D+
Subjt: -------------DERNNIWTLVSKPEGVNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLDISCIQKFKLYQMDV
Query: KSAFLNGYLNEEVYVAQPKGFV----DSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQD
+AFLNG L+EE+Y+ P G+ DS P V L K++YGLKQA R W+ + ++ L G G+ + D T F+ + L +YVDDII
Subjt: KSAFLNGYLNEEVYVAQPKGFV----DSEHPKHVYKLSKALYGLKQAPRAWYERLTIYLRGKGYSRGEIDKTLFIHRESNQLLVAQIYVDDIIFGGFPQD
Query: FVHNFINIMQSEFEMSMVGELSCFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLTASRPDI
V + ++S F++ +G L FL KYA D++ + GL + V ++ G VD K YR +IG L+YL +R DI
Subjt: FVHNFINIMQSEFEMSMVGELSCFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEVDHKLYRSIIGSLLYLTASRPDI
Query: SYAVGICARYQADPRISHLEAVKRIL------------------------------------------------------NKKRNCVSLSTVEAEYIAVG
S+AV +++ PR++H +AV +IL +KK+ VS S+ EAEY A+
Subjt: SYAVGICARYQADPRISHLEAVKRIL------------------------------------------------------NKKRNCVSLSTVEAEYIAVG
Query: SGCTQLIWMKNMLHEYGFD-QDTMMLYCDNMSAVDISKNPVQHSRTKHIDIRHHFIRE
+++W+ E +L+CDN +A+ I+ N V H RTKHI+ H +RE
Subjt: SGCTQLIWMKNMLHEYGFD-QDTMMLYCDNMSAVDISKNPVQHSRTKHIDIRHHFIRE
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| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 5.3e-05 | 30.7 | Show/hide |
Query: NRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTRTTVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRV
NRT+ E R M+ LP F A+A NTA HI N+ E+W + P Y FG + YI D K R+++G + +Y +
Subjt: NRTLQEMARVMIHAKNLPLCFWAEAVNTACHIHNRVTIRTRTTVTLYELWKERKPNVKYFHVFGSICYILADREYRQKWDARSEQGIFLGYSQNSRAYRV
Query: FNNKSVSVMETINV
N+ VS++ TI +
Subjt: FNNKSVSVMETINV
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 4.7e-09 | 31.21 | Show/hide |
Query: IYVDDIIFGGFPQDFVHNFINIMQSEFEMSMVGELSCFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEV-DHKLYRS
+YVDDI+ G ++ I + S F M +G + FL KYA+ ++ G+ K T +KL + A+ D +RS
Subjt: IYVDDIIFGGFPQDFVHNFINIMQSEFEMSMVGELSCFL---------------EKYAKDMIKKFGLGQAQNKWTLTATHVKLIRNTDGAEV-DHKLYRS
Query: IIGSLLYLTASRPDISYAVGICARYQADPRISHLEAVKRIL
I+G+L YLT +RPDISYAV I + +P ++ + +KR+L
Subjt: IIGSLLYLTASRPDISYAVGICARYQADPRISHLEAVKRIL
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 5.7e-15 | 40.8 | Show/hide |
Query: MQTKRKEKIVYLKMVDDLCYTFTIK--PSTVDSALKD--------------ERNNIWTLVSKPEGVNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQV
M T+ K I L L T TIK P +V ALKD RN W LV P NI+G KWVFK K + G + + KARLVA+G+ Q
Subjt: MQTKRKEKIVYLKMVDDLCYTFTIK--PSTVDSALKD--------------ERNNIWTLVSKPEGVNIIGTKWVFKNKTNEAGCVTKNKARLVAQGYTQV
Query: EGVDFDETFAPVARLEAIRLLLDIS
EG+ F ET++PV R IR +L+++
Subjt: EGVDFDETFAPVARLEAIRLLLDIS
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