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Pay0016443 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0016443
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionF-box protein At4g02733
Genome locationchr01:30374944..30377014
RNA-Seq ExpressionPay0016443
SyntenyPay0016443
Gene Ontology termsGO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064067.1 F-box protein SKIP17-like isoform X1 [Cucumis melo var. makuwa]4.1e-3895.51Show/hide
Query:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAG
        MGTYLLEAGKRSAR RATKHNSVV ALPPDLTIKVFSMLDAQSL FATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNA VSTMIHRAG
Subjt:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAG
KAA0064069.1 F-box protein SKIP17-like isoform X1 [Cucumis melo var. makuwa]4.7e-4296.81Show/hide
Query:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGKLPSI
        MGTYLLEAGKRSAR RATKHNSVVSALPPDLTIKVFSMLDAQSL FATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGKLPS+
Subjt:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGKLPSI
XP_008451348.1 PREDICTED: F-box protein SKIP17-like isoform X1 [Cucumis melo]4.1e-3895.51Show/hide
Query:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAG
        MGTYLLEAGKRSAR RATKHNSVV ALPPDLTIKVFSMLDAQSL FATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNA VSTMIHRAG
Subjt:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAG
XP_008451350.2 PREDICTED: F-box protein At4g02733 [Cucumis melo]2.3e-44100Show/hide
Query:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGKLPSIS
        MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGKLPSIS
Subjt:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGKLPSIS
XP_011659301.1 F-box protein SKIP17 isoform X1 [Cucumis sativus]4.1e-3895.51Show/hide
Query:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAG
        MGTYLLEAGKRSAR RATKHNSVV ALPPDLTIKVFSMLDAQSL FATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNA VSTMIHRAG
Subjt:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAG
TrEMBL top hitse value%identityAlignment
A0A0A0K5N7 F-box domain-containing protein2.0e-3895.51Show/hide
Query:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAG
        MGTYLLEAGKRSAR RATKHNSVV ALPPDLTIKVFSMLDAQSL FATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNA VSTMIHRAG
Subjt:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAG
A0A1S3BSD3 F-box protein At4g027331.1e-44100Show/hide
Query:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGKLPSIS
        MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGKLPSIS
Subjt:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGKLPSIS
A0A5A7VAN6 F-box protein SKIP17-like isoform X12.0e-3895.51Show/hide
Query:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAG
        MGTYLLEAGKRSAR RATKHNSVV ALPPDLTIKVFSMLDAQSL FATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNA VSTMIHRAG
Subjt:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAG
A0A5D3DRJ0 F-box protein SKIP17-like isoform X12.0e-3895.51Show/hide
Query:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAG
        MGTYLLEAGKRSAR RATKHNSVV ALPPDLTIKVFSMLDAQSL FATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNA VSTMIHRAG
Subjt:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAG
A0A5D3DRR3 F-box protein SKIP17-like isoform X12.3e-4296.81Show/hide
Query:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGKLPSI
        MGTYLLEAGKRSAR RATKHNSVVSALPPDLTIKVFSMLDAQSL FATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGKLPS+
Subjt:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGKLPSI
SwissProt top hitse value%identityAlignment
Q0WRC9 F-box protein SKIP172.6e-1954.44Show/hide
Query:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGK
        + + LL++ +R  R RA+ HNS   +LPP+LTIKVFSMLD +S+  A   C+MF+KCAMD  CYS+IDLTT +   +   VSTMI+RAGK
Subjt:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGK
Q2V3L6 F-box protein At4g027332.5e-1750Show/hide
Query:  LLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGK
        LL++ KR ++ RAT HNS+   LP +LT+KVFSM+D +SL  A+A C+MF+ CAMDP CY +IDLT     V++  + T+++R+GK
Subjt:  LLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGK
Q9SY03 F-box protein At4g027601.5e-1956.67Show/hide
Query:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGK
        + + L ++ KR  R RAT  NS    L P+LTIKVFSMLD +SL  A+A C+MF+KCAMD  CYS+IDLTT +  V+N  V  MIHRAGK
Subjt:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGK
Arabidopsis top hitse value%identityAlignment
AT4G02733.1 F-box family protein1.7e-1850Show/hide
Query:  LLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGK
        LL++ KR ++ RAT HNS+   LP +LT+KVFSM+D +SL  A+A C+MF+ CAMDP CY +IDLT     V++  + T+++R+GK
Subjt:  LLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGK
AT4G02740.1 F-box/RNI-like superfamily protein1.9e-2054.44Show/hide
Query:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGK
        + + LL++ +R  R RA+ HNS   +LPP+LTIKVFSMLD +S+  A   C+MF+KCAMD  CYS+IDLTT +   +   VSTMI+RAGK
Subjt:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGK
AT4G02760.1 RNI-like superfamily protein1.1e-2056.67Show/hide
Query:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGK
        + + L ++ KR  R RAT  NS    L P+LTIKVFSMLD +SL  A+A C+MF+KCAMD  CYS+IDLTT +  V+N  V  MIHRAGK
Subjt:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGK
AT4G02760.2 RNI-like superfamily protein1.1e-2056.67Show/hide
Query:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGK
        + + L ++ KR  R RAT  NS    L P+LTIKVFSMLD +SL  A+A C+MF+KCAMD  CYS+IDLTT +  V+N  V  MIHRAGK
Subjt:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGK
AT4G02760.3 RNI-like superfamily protein1.1e-2056.67Show/hide
Query:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGK
        + + L ++ KR  R RAT  NS    L P+LTIKVFSMLD +SL  A+A C+MF+KCAMD  CYS+IDLTT +  V+N  V  MIHRAGK
Subjt:  MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCACCTACTTGCTCGAAGCTGGTAAACGTTCTGCTAGGATACGAGCTACTAAGCATAACTCTGTCGTTTCGGCTCTTCCTCCTGACCTCACCATCAAAGTTTTTTC
CATGCTTGACGCACAGAGCCTTTTCTTTGCAACAGCTACTTGTTCGATGTTTCACAAGTGTGCAATGGATCCTTCTTGCTATTCCAACATTGACTTAACAACAGTTTCTC
CAAGAGTTAATAATGCAGCAGTTTCTACAATGATTCACCGTGCTGGAAAACTCCCTTCAATCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCACCTACTTGCTCGAAGCTGGTAAACGTTCTGCTAGGATACGAGCTACTAAGCATAACTCTGTCGTTTCGGCTCTTCCTCCTGACCTCACCATCAAAGTTTTTTC
CATGCTTGACGCACAGAGCCTTTTCTTTGCAACAGCTACTTGTTCGATGTTTCACAAGTGTGCAATGGATCCTTCTTGCTATTCCAACATTGACTTAACAACAGTTTCTC
CAAGAGTTAATAATGCAGCAGTTTCTACAATGATTCACCGTGCTGGAAAACTCCCTTCAATCTCTTAAGCTTGGTATAGTTCCTGGCCCAACTTCATCCCCAGGTTCTTG
CCAACCGTTGGTTTACAATGTCAGTAGCTTTTCATGGAATGACAAAAGATCCAGACAAGGGAAGAAGTCATCAGTACTCACAAGATCATGCTTAAGCCCTTTGGGTGGGG
CCAGTACTCTTGGGATGCTCTTAAAAATGCTGCATCTTTACAACATTGAAAGACTGGATAGTCCATCACTTCGTGCTGCATTATCTGCTTGCCCATCTCTCCTTTATCTG
GAAATTGTGGGCCTGTAAGTTTCTTTAGTTGACCAATTTTGTGGTTTTCTAATAATTTAAGCTGGAATATACTGTTTTTGTTTAAAAATGTTGATACTGGTGAACTGTAA
TACAAGGACTAAGATTTCTTCAACTCTTGTCCTGATGTGTCTCACCTTTTCTTTTGATATCACCG
Protein sequenceShow/hide protein sequence
MGTYLLEAGKRSARIRATKHNSVVSALPPDLTIKVFSMLDAQSLFFATATCSMFHKCAMDPSCYSNIDLTTVSPRVNNAAVSTMIHRAGKLPSIS