| GenBank top hits | e value | %identity | Alignment |
|---|
| AAO73521.1 gag-pol polyprotein [Glycine max] | 7.8e-193 | 51.04 | Show/hide |
Query: VALTSVKSPNSSDWYFDSGCSRHMTGNADFFSELSECKVGSVVFGDGGKGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCN
V TS+++ DWY DSGCSRHMTG +F + C V FGDG KGKIIG G + H GLP L V L++GL ANLISISQLCD+G+ V+F K C
Subjt: VALTSVKSPNSSDWYFDSGCSRHMTGNADFFSELSECKVGSVVFGDGGKGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCN
Query: VLDVQNKVFLSGTRLSDNCYHWDAEVT----LCNLSKVEEARLWHKRLGHLSGATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNISST
V + +++V + G+R DNCY W + T C SK +E R+WH+R GHL + K+ A+ G+P L C EC GKQVK H+ + +T
Subjt: VLDVQNKVFLSGTRLSDNCYHWDAEVT----LCNLSKVEEARLWHKRLGHLSGATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNISST
Query: SHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSRYTWIKFILDKSETFKTCQTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPL
S +LELLH+DLMGPMQ ESLG K YA V VDDFSR+TW+KFI +KSETF+ + L +LQREK+ I +I++DHG EFEN EFC +EGI HEFSA +
Subjt: SHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSRYTWIKFILDKSETFKTCQTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPL
Query: TLQQNGVVERRNRTLQEMAR-------------AEALNTACHIHNRVILRPGTTTTSYELWKGRKPNVK---------------DHRRKWDSKSDRGIFL
T QQNG+VER+NRTLQE AR AEA+NTAC+IHNRV LR GT TT YE+WKGRKP+VK + RRK D KSD GIFL
Subjt: TLQQNGVVERRNRTLQEMAR-------------AEALNTACHIHNRVILRPGTTTTSYELWKGRKPNVK---------------DHRRKWDSKSDRGIFL
Query: GYLANSRAYRVYNQCSKIVMESINVIIDDLG---------------------------------------------RNLTEILMM---------------
GY NSRAYRV+N ++ VMESINV++DDL R+ T I M
Subjt: GYLANSRAYRVYNQCSKIVMESINVIIDDLG---------------------------------------------RNLTEILMM---------------
Query: -KLRFFGIL---------------------FLINQMKEKLLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGET
+ R I+ F IN M+E+L QF+RN+VWELVP+P N+IGTKWIFKNKT+EEG + RNKARLVAQGY+QIEG+DF ET
Subjt: -KLRFFGIL---------------------FLINQMKEKLLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGET
Query: FAPVARLEAIRLLLSYACFWRFKLFQMDVKSAFLNGYLCEEVYVAQPKGFVDPVHEDHVYKLRKALYRLKQAPRACYERLSTYLLQQGYQRGSADQTMFI
FAPVARLE+IRLLL AC +FKL+QMDVKSAFLNGYL EEVYV QPKGF DP H DHVY+L+KALY LKQAPRA YERL+ +L QQGY++G D+T+F+
Subjt: FAPVARLEAIRLLLSYACFWRFKLFQMDVKSAFLNGYLCEEVYVAQPKGFVDPVHEDHVYKLRKALYRLKQAPRACYERLSTYLLQQGYQRGSADQTMFI
Query: YRQGTDFLIIQIYVDGIIFGDTS
+ + +I QIYVD I+FG S
Subjt: YRQGTDFLIIQIYVDGIIFGDTS
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| AAO73527.1 gag-pol polyprotein [Glycine max] | 6.0e-193 | 51.04 | Show/hide |
Query: VALTSVKSPNSSDWYFDSGCSRHMTGNADFFSELSECKVGSVVFGDGGKGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCN
V TS+++ DWY DSGCSRHMTG +F + C V FGDG KGKIIG G + H GLP L V L++GL ANLISISQLCD+G+ V+F K C
Subjt: VALTSVKSPNSSDWYFDSGCSRHMTGNADFFSELSECKVGSVVFGDGGKGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCN
Query: VLDVQNKVFLSGTRLSDNCYHWDAEVT----LCNLSKVEEARLWHKRLGHLSGATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNISST
V + +++V + G+R DNCY W + T C SK +E R+WH+R GHL + K+ A+ G+P L C EC GKQVK H+ + +T
Subjt: VLDVQNKVFLSGTRLSDNCYHWDAEVT----LCNLSKVEEARLWHKRLGHLSGATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNISST
Query: SHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSRYTWIKFILDKSETFKTCQTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPL
S +LELLH+DLMGPMQ ESLG K YA V VDDFSR+TW+ FI +KSETF+ + L +LQREK+ I +I++DHG EFEN F EFC +EGI HEFSA +
Subjt: SHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSRYTWIKFILDKSETFKTCQTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPL
Query: TLQQNGVVERRNRTLQEMAR-------------AEALNTACHIHNRVILRPGTTTTSYELWKGRKPNVK---------------DHRRKWDSKSDRGIFL
T QQNG+VER+NRTLQE AR AEA+NTAC+IHNRV LR GT TT YE+WKGRKP+VK + RRK D KSD GIFL
Subjt: TLQQNGVVERRNRTLQEMAR-------------AEALNTACHIHNRVILRPGTTTTSYELWKGRKPNVK---------------DHRRKWDSKSDRGIFL
Query: GYLANSRAYRVYNQCSKIVMESINVIIDDLG---------------------------------------------RNLTEILMM---------------
GY NSRAYRV+N ++ VMESINV++DDL R+ T I M
Subjt: GYLANSRAYRVYNQCSKIVMESINVIIDDLG---------------------------------------------RNLTEILMM---------------
Query: -KLRFFGIL---------------------FLINQMKEKLLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGET
+ R I+ F IN M+E+L QF+RN+VWELVP+P N+IGTKWIFKNKT+EEG + RNKARLVAQGY+QIEG+DF ET
Subjt: -KLRFFGIL---------------------FLINQMKEKLLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGET
Query: FAPVARLEAIRLLLSYACFWRFKLFQMDVKSAFLNGYLCEEVYVAQPKGFVDPVHEDHVYKLRKALYRLKQAPRACYERLSTYLLQQGYQRGSADQTMFI
FAPVARLE+IRLLL AC +FKL+QMDVKSAFLNGYL EEVYV QPKGF DP H DHVY+L+KALY LKQAPRA YERL+ +L QQGY++G D+T+F+
Subjt: FAPVARLEAIRLLLSYACFWRFKLFQMDVKSAFLNGYLCEEVYVAQPKGFVDPVHEDHVYKLRKALYRLKQAPRACYERLSTYLLQQGYQRGSADQTMFI
Query: YRQGTDFLIIQIYVDGIIFGDTS
+ + +I QIYVD I+FG S
Subjt: YRQGTDFLIIQIYVDGIIFGDTS
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| KAA0040705.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.6e-198 | 57.46 | Show/hide |
Query: MALISVCTMNDEE----NVQTHDQLES---KNLTNDTAN-RKIEDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARM-------
MALIS+C MNDEE N QTHD ES K LT+ + +K EDQE+ILQQQERIQDLVEENQSFLSSIVTLK EL ETKHQFEELLKFARM
Subjt: MALISVCTMNDEE----NVQTHDQLES---KNLTNDTAN-RKIEDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARM-------
Query: ----------------------DTPVRKTVFIREGTLQNSPTNKEQGKGTEITSMPVKSPNKRTQNCKVALTSVKSPNSSDWYFDSGCSRHMTGNADFFS
D PVR T+FIREG + + G +I+ ++CKVA+TSVKSPNS DWYFDSGCSRHMTGNADFFS
Subjt: ----------------------DTPVRKTVFIREGTLQNSPTNKEQGKGTEITSMPVKSPNKRTQNCKVALTSVKSPNSSDWYFDSGCSRHMTGNADFFS
Query: ELSECKVGSVVFGDGGKGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCNVLDVQNKVFLSGTRLSDNCYHWDAEVTLCNLS
ELSECKVGSVVFGDGGKGKIIGKGTINH GLPFLLDV+L+QGL+ANL+SISQLCDQGYQVS +KDR NVLD QNKVF S TR+SDNCYHWDAEV LCNLS
Subjt: ELSECKVGSVVFGDGGKGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCNVLDVQNKVFLSGTRLSDNCYHWDAEVTLCNLS
Query: KVEEARLWHKRLGHLSGATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNISSTSHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSRY
KV+EA LWHKRLGHL G TI KVTK DAIIGLPP SF SL+SC EC AGKQVKSVHKP
Subjt: KVEEARLWHKRLGHLSGATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNISSTSHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSRY
Query: TWIKFILDKSETFKTCQTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPLTLQQNGVVERRNRTLQEMARAEALNTACHIHNRVIL
TCQTLFTQLQREKNT IG+I+TDHG EFEN++F EFCDNE E S LT + + +M+
Subjt: TWIKFILDKSETFKTCQTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPLTLQQNGVVERRNRTLQEMARAEALNTACHIHNRVIL
Query: RPGTTTTSYELWKGRK-PNVKDHRRKWDSKSDRGIFLGYLANSRAYRVYNQCSKIVMESINVIIDDLGRNLTEILMMKLRFFGILFLINQMKEKLLQFER
P T+ E+ +G + H +W S +S +++ II D+ + I K R + N E+LLQFER
Subjt: RPGTTTTSYELWKGRK-PNVKDHRRKWDSKSDRGIFLGYLANSRAYRVYNQCSKIVMESINVIIDDLGRNLTEILMMKLRFFGILFLINQMKEKLLQFER
Query: NQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGETFAPVARLEAIRLLLSYACFWRFKLFQMDVKSAFLNGYLCEEVYVA
NQVWELVPKPP+ANIIGTKWIFK KT E+GRVIRN+ARLVAQGYSQIEGLD ETFA VARLEAIRLLLSYA F RFKLF MDVKSAFLNGYL EEVYVA
Subjt: NQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGETFAPVARLEAIRLLLSYACFWRFKLFQMDVKSAFLNGYLCEEVYVA
Query: QPKGFVDPVHEDHVYKLRKALYRLKQAPRAC
+PKGFVD VH DHVYKL+KALY LKQA RAC
Subjt: QPKGFVDPVHEDHVYKLRKALYRLKQAPRAC
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| KAA0048721.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.0e-232 | 64.66 | Show/hide |
Query: LKFARMDTPVRKTVFIREGTLQNSPTNKEQGKGTEITSMPVKSPNKRTQNCKVALTSVKSPNSSDWYFDSGCSRHMTGNADFFSELSECKVGSVVFGDGG
L+F DTPVRKTVFIREGTLQNSPTN EQGK +NCKVALTSVKSPNS DWYFDSGCSRHMTGNADFFSELSECK GSVVF DGG
Subjt: LKFARMDTPVRKTVFIREGTLQNSPTNKEQGKGTEITSMPVKSPNKRTQNCKVALTSVKSPNSSDWYFDSGCSRHMTGNADFFSELSECKVGSVVFGDGG
Query: KGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCNVLDVQNKVFLSGTRLSDNCYHWDAEVTLCNLSKVEEARLWHKRLGHLS
KGKIIGKGTIN GLPFLLDVRL+QGL+ANLIS SQLCDQGY+V+F+KDRCNVLD QNKVFLSGTRLSDNCYHWDAEVTLCNLSKVEEA LWHKRLGHL
Subjt: KGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCNVLDVQNKVFLSGTRLSDNCYHWDAEVTLCNLSKVEEARLWHKRLGHLS
Query: GATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNISSTSHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSRYTWIKFILDKSETFKTC
GATISKV K +AIIGLPPLSF SLESCSEC AGKQVKSVHKPVNIS TSHILELLHIDLM PMQTESLGRK YAVVCVDDFSRYTWIKFIL+K ETFKTC
Subjt: GATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNISSTSHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSRYTWIKFILDKSETFKTC
Query: QTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPLTLQQNGVVERRNRTLQEMAR-------------AEALNTACHIHNRVILRPG
QTL TQLQREKNT IG+I+T+HG EFEN+HFAEFCDNEGIFHEFSA LT Q+NGVVE+RN+TLQEMAR AEALNTACHIHNRVILRP
Subjt: QTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPLTLQQNGVVERRNRTLQEMAR-------------AEALNTACHIHNRVILRPG
Query: TTTTSYELWKGRKPNVK---------------DHRRKWDSKSDRGIFLGYLANSRAYRVYNQCSKIVMESINVIIDDLG----RNL--------------
TTTTSYELWKGRKPNVK DHRRKWDSKSDRGIFLGY AN+RAYRVYNQ +KIV+ESINVIIDDLG RNL
Subjt: TTTTSYELWKGRKPNVK---------------DHRRKWDSKSDRGIFLGYLANSRAYRVYNQCSKIVMESINVIIDDLG----RNL--------------
Query: ------------TEILMMKLRF-------------------------------------------------------------------FGIL-------
E + F GI+
Subjt: ------------TEILMMKLRF-------------------------------------------------------------------FGIL-------
Query: ---------------------------FLINQMKEKLLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGETFA
LI M+E+LLQFERNQVWELVPK PYANIIGTKWIFKNKTDEEGRVI NKARLVAQGYSQIEG + F+
Subjt: ---------------------------FLINQMKEKLLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGETFA
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| KAA0059225.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 0.0e+00 | 77.03 | Show/hide |
Query: MALISVCTMNDEENVQTHDQLESKNLTNDTANRKIEDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARM---------------
MALISVCTMNDEENVQTHDQLESKNLTNDTANRKIEDQEVILQQQERIQDLVEENQSFLSSIVTLKEELA+TKHQFEELLKFARM
Subjt: MALISVCTMNDEENVQTHDQLESKNLTNDTANRKIEDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARM---------------
Query: --------------DTPVRKTVFIREGTLQNSPTNKEQGKGTEITSMPVK---SPNK------RTQNCKVALTSVKSPNSSDWYFDSGCSRHMTGNADFF
DTPVRKTVFIREGTLQNSPTN EQGKGTEITSMP K SP +NCKVALTSVKSPNSSDWYFDSGCSRHMTGNADFF
Subjt: --------------DTPVRKTVFIREGTLQNSPTNKEQGKGTEITSMPVK---SPNK------RTQNCKVALTSVKSPNSSDWYFDSGCSRHMTGNADFF
Query: SELSECKVGSVVFGDGGKGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCNVLDVQNKVFLSGTRLSDNCYHWDAEVTLCNL
SELSECKVGSVVFGDGGKGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCNVLDVQNKVFLSGTRLSDNCYHWDAEVTLCNL
Subjt: SELSECKVGSVVFGDGGKGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCNVLDVQNKVFLSGTRLSDNCYHWDAEVTLCNL
Query: SKVEEARLWHKRLGHLSGATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNISSTSHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSR
SKVEEARLWHKRLGHLSGATISKVTKVDAIIGLPPL+FLSLESCSECTAGKQVKSVHKPVNISSTSHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSR
Subjt: SKVEEARLWHKRLGHLSGATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNISSTSHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSR
Query: YTWIKFILDKSETFKTCQTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPLTLQQNGVVERRNRTLQEMARAEALNTACHIHNRVI
YTWIKFILDK ETFKTCQTLFTQLQREKNT IGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPLTLQQNGV AEALNTACHIHNRVI
Subjt: YTWIKFILDKSETFKTCQTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPLTLQQNGVVERRNRTLQEMARAEALNTACHIHNRVI
Query: LRPGTTTTSYELWKGRKPNVK---------------DHRRKWDSKSDRGIFLGYLANSRAYRVYNQCSKIVMESINVIIDDLGR---------NLTEILM
LRPGTTTTSYELWKGRKPNVK DHRRKWDSKSDRGIFLGYLANSRAYRVYNQCSKIVMESINVIIDDL N T L
Subjt: LRPGTTTTSYELWKGRKPNVK---------------DHRRKWDSKSDRGIFLGYLANSRAYRVYNQCSKIVMESINVIIDDLGR---------NLTEILM
Query: MKLRFFGI------------------------------------------------------LFLINQ--------------------------------
L I F+I
Subjt: MKLRFFGI------------------------------------------------------LFLINQ--------------------------------
Query: -------------MKEKLLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGETFAPVARLEAIRLLLSYACFWRF
++E+LLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGETFAPVARLEAIRLLLSYACFWRF
Subjt: -------------MKEKLLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGETFAPVARLEAIRLLLSYACFWRF
Query: KLFQMDVKSAFLNGYLCEEVYVAQPKGFVDPVHEDHVYKLRKALYRLKQAPRACYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIIQIYVDGIIFGDT
KLFQMDVKSAFLNGYLCEEVYVAQPKGFVDPVHEDHVYKLRKALYRLKQAPRA YERLSTYLLQQGYQRGSADQTMFIYRQGT+FLI+QIYVDGIIFGDT
Subjt: KLFQMDVKSAFLNGYLCEEVYVAQPKGFVDPVHEDHVYKLRKALYRLKQAPRACYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIIQIYVDGIIFGDT
Query: S
S
Subjt: S
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TGY4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.9e-199 | 57.46 | Show/hide |
Query: MALISVCTMNDEE----NVQTHDQLES---KNLTNDTAN-RKIEDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARM-------
MALIS+C MNDEE N QTHD ES K LT+ + +K EDQE+ILQQQERIQDLVEENQSFLSSIVTLK EL ETKHQFEELLKFARM
Subjt: MALISVCTMNDEE----NVQTHDQLES---KNLTNDTAN-RKIEDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARM-------
Query: ----------------------DTPVRKTVFIREGTLQNSPTNKEQGKGTEITSMPVKSPNKRTQNCKVALTSVKSPNSSDWYFDSGCSRHMTGNADFFS
D PVR T+FIREG + + G +I+ ++CKVA+TSVKSPNS DWYFDSGCSRHMTGNADFFS
Subjt: ----------------------DTPVRKTVFIREGTLQNSPTNKEQGKGTEITSMPVKSPNKRTQNCKVALTSVKSPNSSDWYFDSGCSRHMTGNADFFS
Query: ELSECKVGSVVFGDGGKGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCNVLDVQNKVFLSGTRLSDNCYHWDAEVTLCNLS
ELSECKVGSVVFGDGGKGKIIGKGTINH GLPFLLDV+L+QGL+ANL+SISQLCDQGYQVS +KDR NVLD QNKVF S TR+SDNCYHWDAEV LCNLS
Subjt: ELSECKVGSVVFGDGGKGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCNVLDVQNKVFLSGTRLSDNCYHWDAEVTLCNLS
Query: KVEEARLWHKRLGHLSGATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNISSTSHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSRY
KV+EA LWHKRLGHL G TI KVTK DAIIGLPP SF SL+SC EC AGKQVKSVHKP
Subjt: KVEEARLWHKRLGHLSGATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNISSTSHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSRY
Query: TWIKFILDKSETFKTCQTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPLTLQQNGVVERRNRTLQEMARAEALNTACHIHNRVIL
TCQTLFTQLQREKNT IG+I+TDHG EFEN++F EFCDNE E S LT + + +M+
Subjt: TWIKFILDKSETFKTCQTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPLTLQQNGVVERRNRTLQEMARAEALNTACHIHNRVIL
Query: RPGTTTTSYELWKGRK-PNVKDHRRKWDSKSDRGIFLGYLANSRAYRVYNQCSKIVMESINVIIDDLGRNLTEILMMKLRFFGILFLINQMKEKLLQFER
P T+ E+ +G + H +W S +S +++ II D+ + I K R + N E+LLQFER
Subjt: RPGTTTTSYELWKGRK-PNVKDHRRKWDSKSDRGIFLGYLANSRAYRVYNQCSKIVMESINVIIDDLGRNLTEILMMKLRFFGILFLINQMKEKLLQFER
Query: NQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGETFAPVARLEAIRLLLSYACFWRFKLFQMDVKSAFLNGYLCEEVYVA
NQVWELVPKPP+ANIIGTKWIFK KT E+GRVIRN+ARLVAQGYSQIEGLD ETFA VARLEAIRLLLSYA F RFKLF MDVKSAFLNGYL EEVYVA
Subjt: NQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGETFAPVARLEAIRLLLSYACFWRFKLFQMDVKSAFLNGYLCEEVYVA
Query: QPKGFVDPVHEDHVYKLRKALYRLKQAPRAC
+PKGFVD VH DHVYKL+KALY LKQA RAC
Subjt: QPKGFVDPVHEDHVYKLRKALYRLKQAPRAC
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| A0A5A7V046 Gag-pol polyprotein | 0.0e+00 | 77.03 | Show/hide |
Query: MALISVCTMNDEENVQTHDQLESKNLTNDTANRKIEDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARM---------------
MALISVCTMNDEENVQTHDQLESKNLTNDTANRKIEDQEVILQQQERIQDLVEENQSFLSSIVTLKEELA+TKHQFEELLKFARM
Subjt: MALISVCTMNDEENVQTHDQLESKNLTNDTANRKIEDQEVILQQQERIQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARM---------------
Query: --------------DTPVRKTVFIREGTLQNSPTNKEQGKGTEITSMPVK---SPNK------RTQNCKVALTSVKSPNSSDWYFDSGCSRHMTGNADFF
DTPVRKTVFIREGTLQNSPTN EQGKGTEITSMP K SP +NCKVALTSVKSPNSSDWYFDSGCSRHMTGNADFF
Subjt: --------------DTPVRKTVFIREGTLQNSPTNKEQGKGTEITSMPVK---SPNK------RTQNCKVALTSVKSPNSSDWYFDSGCSRHMTGNADFF
Query: SELSECKVGSVVFGDGGKGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCNVLDVQNKVFLSGTRLSDNCYHWDAEVTLCNL
SELSECKVGSVVFGDGGKGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCNVLDVQNKVFLSGTRLSDNCYHWDAEVTLCNL
Subjt: SELSECKVGSVVFGDGGKGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCNVLDVQNKVFLSGTRLSDNCYHWDAEVTLCNL
Query: SKVEEARLWHKRLGHLSGATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNISSTSHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSR
SKVEEARLWHKRLGHLSGATISKVTKVDAIIGLPPL+FLSLESCSECTAGKQVKSVHKPVNISSTSHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSR
Subjt: SKVEEARLWHKRLGHLSGATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNISSTSHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSR
Query: YTWIKFILDKSETFKTCQTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPLTLQQNGVVERRNRTLQEMARAEALNTACHIHNRVI
YTWIKFILDK ETFKTCQTLFTQLQREKNT IGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPLTLQQNGV AEALNTACHIHNRVI
Subjt: YTWIKFILDKSETFKTCQTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPLTLQQNGVVERRNRTLQEMARAEALNTACHIHNRVI
Query: LRPGTTTTSYELWKGRKPNVK---------------DHRRKWDSKSDRGIFLGYLANSRAYRVYNQCSKIVMESINVIIDDLGR---------NLTEILM
LRPGTTTTSYELWKGRKPNVK DHRRKWDSKSDRGIFLGYLANSRAYRVYNQCSKIVMESINVIIDDL N T L
Subjt: LRPGTTTTSYELWKGRKPNVK---------------DHRRKWDSKSDRGIFLGYLANSRAYRVYNQCSKIVMESINVIIDDLGR---------NLTEILM
Query: MKLRFFGI------------------------------------------------------LFLINQ--------------------------------
L I F+I
Subjt: MKLRFFGI------------------------------------------------------LFLINQ--------------------------------
Query: -------------MKEKLLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGETFAPVARLEAIRLLLSYACFWRF
++E+LLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGETFAPVARLEAIRLLLSYACFWRF
Subjt: -------------MKEKLLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGETFAPVARLEAIRLLLSYACFWRF
Query: KLFQMDVKSAFLNGYLCEEVYVAQPKGFVDPVHEDHVYKLRKALYRLKQAPRACYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIIQIYVDGIIFGDT
KLFQMDVKSAFLNGYLCEEVYVAQPKGFVDPVHEDHVYKLRKALYRLKQAPRA YERLSTYLLQQGYQRGSADQTMFIYRQGT+FLI+QIYVDGIIFGDT
Subjt: KLFQMDVKSAFLNGYLCEEVYVAQPKGFVDPVHEDHVYKLRKALYRLKQAPRACYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIIQIYVDGIIFGDT
Query: S
S
Subjt: S
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| A0A5D3C9Q6 Gag-pol polyprotein | 4.9e-233 | 64.66 | Show/hide |
Query: LKFARMDTPVRKTVFIREGTLQNSPTNKEQGKGTEITSMPVKSPNKRTQNCKVALTSVKSPNSSDWYFDSGCSRHMTGNADFFSELSECKVGSVVFGDGG
L+F DTPVRKTVFIREGTLQNSPTN EQGK +NCKVALTSVKSPNS DWYFDSGCSRHMTGNADFFSELSECK GSVVF DGG
Subjt: LKFARMDTPVRKTVFIREGTLQNSPTNKEQGKGTEITSMPVKSPNKRTQNCKVALTSVKSPNSSDWYFDSGCSRHMTGNADFFSELSECKVGSVVFGDGG
Query: KGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCNVLDVQNKVFLSGTRLSDNCYHWDAEVTLCNLSKVEEARLWHKRLGHLS
KGKIIGKGTIN GLPFLLDVRL+QGL+ANLIS SQLCDQGY+V+F+KDRCNVLD QNKVFLSGTRLSDNCYHWDAEVTLCNLSKVEEA LWHKRLGHL
Subjt: KGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCNVLDVQNKVFLSGTRLSDNCYHWDAEVTLCNLSKVEEARLWHKRLGHLS
Query: GATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNISSTSHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSRYTWIKFILDKSETFKTC
GATISKV K +AIIGLPPLSF SLESCSEC AGKQVKSVHKPVNIS TSHILELLHIDLM PMQTESLGRK YAVVCVDDFSRYTWIKFIL+K ETFKTC
Subjt: GATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNISSTSHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSRYTWIKFILDKSETFKTC
Query: QTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPLTLQQNGVVERRNRTLQEMAR-------------AEALNTACHIHNRVILRPG
QTL TQLQREKNT IG+I+T+HG EFEN+HFAEFCDNEGIFHEFSA LT Q+NGVVE+RN+TLQEMAR AEALNTACHIHNRVILRP
Subjt: QTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPLTLQQNGVVERRNRTLQEMAR-------------AEALNTACHIHNRVILRPG
Query: TTTTSYELWKGRKPNVK---------------DHRRKWDSKSDRGIFLGYLANSRAYRVYNQCSKIVMESINVIIDDLG----RNL--------------
TTTTSYELWKGRKPNVK DHRRKWDSKSDRGIFLGY AN+RAYRVYNQ +KIV+ESINVIIDDLG RNL
Subjt: TTTTSYELWKGRKPNVK---------------DHRRKWDSKSDRGIFLGYLANSRAYRVYNQCSKIVMESINVIIDDLG----RNL--------------
Query: ------------TEILMMKLRF-------------------------------------------------------------------FGIL-------
E + F GI+
Subjt: ------------TEILMMKLRF-------------------------------------------------------------------FGIL-------
Query: ---------------------------FLINQMKEKLLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGETFA
LI M+E+LLQFERNQVWELVPK PYANIIGTKWIFKNKTDEEGRVI NKARLVAQGYSQIEG + F+
Subjt: ---------------------------FLINQMKEKLLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGETFA
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| Q84VH8 Gag-pol polyprotein | 2.9e-193 | 51.04 | Show/hide |
Query: VALTSVKSPNSSDWYFDSGCSRHMTGNADFFSELSECKVGSVVFGDGGKGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCN
V TS+++ DWY DSGCSRHMTG +F + C V FGDG KGKIIG G + H GLP L V L++GL ANLISISQLCD+G+ V+F K C
Subjt: VALTSVKSPNSSDWYFDSGCSRHMTGNADFFSELSECKVGSVVFGDGGKGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCN
Query: VLDVQNKVFLSGTRLSDNCYHWDAEVT----LCNLSKVEEARLWHKRLGHLSGATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNISST
V + +++V + G+R DNCY W + T C SK +E R+WH+R GHL + K+ A+ G+P L C EC GKQVK H+ + +T
Subjt: VLDVQNKVFLSGTRLSDNCYHWDAEVT----LCNLSKVEEARLWHKRLGHLSGATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNISST
Query: SHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSRYTWIKFILDKSETFKTCQTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPL
S +LELLH+DLMGPMQ ESLG K YA V VDDFSR+TW+ FI +KSETF+ + L +LQREK+ I +I++DHG EFEN F EFC +EGI HEFSA +
Subjt: SHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSRYTWIKFILDKSETFKTCQTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPL
Query: TLQQNGVVERRNRTLQEMAR-------------AEALNTACHIHNRVILRPGTTTTSYELWKGRKPNVK---------------DHRRKWDSKSDRGIFL
T QQNG+VER+NRTLQE AR AEA+NTAC+IHNRV LR GT TT YE+WKGRKP+VK + RRK D KSD GIFL
Subjt: TLQQNGVVERRNRTLQEMAR-------------AEALNTACHIHNRVILRPGTTTTSYELWKGRKPNVK---------------DHRRKWDSKSDRGIFL
Query: GYLANSRAYRVYNQCSKIVMESINVIIDDLG---------------------------------------------RNLTEILMM---------------
GY NSRAYRV+N ++ VMESINV++DDL R+ T I M
Subjt: GYLANSRAYRVYNQCSKIVMESINVIIDDLG---------------------------------------------RNLTEILMM---------------
Query: -KLRFFGIL---------------------FLINQMKEKLLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGET
+ R I+ F IN M+E+L QF+RN+VWELVP+P N+IGTKWIFKNKT+EEG + RNKARLVAQGY+QIEG+DF ET
Subjt: -KLRFFGIL---------------------FLINQMKEKLLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGET
Query: FAPVARLEAIRLLLSYACFWRFKLFQMDVKSAFLNGYLCEEVYVAQPKGFVDPVHEDHVYKLRKALYRLKQAPRACYERLSTYLLQQGYQRGSADQTMFI
FAPVARLE+IRLLL AC +FKL+QMDVKSAFLNGYL EEVYV QPKGF DP H DHVY+L+KALY LKQAPRA YERL+ +L QQGY++G D+T+F+
Subjt: FAPVARLEAIRLLLSYACFWRFKLFQMDVKSAFLNGYLCEEVYVAQPKGFVDPVHEDHVYKLRKALYRLKQAPRACYERLSTYLLQQGYQRGSADQTMFI
Query: YRQGTDFLIIQIYVDGIIFGDTS
+ + +I QIYVD I+FG S
Subjt: YRQGTDFLIIQIYVDGIIFGDTS
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| Q84VI4 Gag-pol polyprotein | 3.8e-193 | 51.04 | Show/hide |
Query: VALTSVKSPNSSDWYFDSGCSRHMTGNADFFSELSECKVGSVVFGDGGKGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCN
V TS+++ DWY DSGCSRHMTG +F + C V FGDG KGKIIG G + H GLP L V L++GL ANLISISQLCD+G+ V+F K C
Subjt: VALTSVKSPNSSDWYFDSGCSRHMTGNADFFSELSECKVGSVVFGDGGKGKIIGKGTINHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCN
Query: VLDVQNKVFLSGTRLSDNCYHWDAEVT----LCNLSKVEEARLWHKRLGHLSGATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNISST
V + +++V + G+R DNCY W + T C SK +E R+WH+R GHL + K+ A+ G+P L C EC GKQVK H+ + +T
Subjt: VLDVQNKVFLSGTRLSDNCYHWDAEVT----LCNLSKVEEARLWHKRLGHLSGATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNISST
Query: SHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSRYTWIKFILDKSETFKTCQTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPL
S +LELLH+DLMGPMQ ESLG K YA V VDDFSR+TW+KFI +KSETF+ + L +LQREK+ I +I++DHG EFEN EFC +EGI HEFSA +
Subjt: SHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSRYTWIKFILDKSETFKTCQTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPL
Query: TLQQNGVVERRNRTLQEMAR-------------AEALNTACHIHNRVILRPGTTTTSYELWKGRKPNVK---------------DHRRKWDSKSDRGIFL
T QQNG+VER+NRTLQE AR AEA+NTAC+IHNRV LR GT TT YE+WKGRKP+VK + RRK D KSD GIFL
Subjt: TLQQNGVVERRNRTLQEMAR-------------AEALNTACHIHNRVILRPGTTTTSYELWKGRKPNVK---------------DHRRKWDSKSDRGIFL
Query: GYLANSRAYRVYNQCSKIVMESINVIIDDLG---------------------------------------------RNLTEILMM---------------
GY NSRAYRV+N ++ VMESINV++DDL R+ T I M
Subjt: GYLANSRAYRVYNQCSKIVMESINVIIDDLG---------------------------------------------RNLTEILMM---------------
Query: -KLRFFGIL---------------------FLINQMKEKLLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGET
+ R I+ F IN M+E+L QF+RN+VWELVP+P N+IGTKWIFKNKT+EEG + RNKARLVAQGY+QIEG+DF ET
Subjt: -KLRFFGIL---------------------FLINQMKEKLLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGET
Query: FAPVARLEAIRLLLSYACFWRFKLFQMDVKSAFLNGYLCEEVYVAQPKGFVDPVHEDHVYKLRKALYRLKQAPRACYERLSTYLLQQGYQRGSADQTMFI
FAPVARLE+IRLLL AC +FKL+QMDVKSAFLNGYL EEVYV QPKGF DP H DHVY+L+KALY LKQAPRA YERL+ +L QQGY++G D+T+F+
Subjt: FAPVARLEAIRLLLSYACFWRFKLFQMDVKSAFLNGYLCEEVYVAQPKGFVDPVHEDHVYKLRKALYRLKQAPRACYERLSTYLLQQGYQRGSADQTMFI
Query: YRQGTDFLIIQIYVDGIIFGDTS
+ + +I QIYVD I+FG S
Subjt: YRQGTDFLIIQIYVDGIIFGDTS
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 6.8e-30 | 40 | Show/hide |
Query: NQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGETFAPVARLEAIRLLLSYACFWRFKLFQMDVKSAFLNGYLCEEVYVA
N W + +P NI+ ++W+F K +E G IR KARLVA+G++Q +D+ ETFAPVAR+ + R +LS + K+ QMDVK+AFLNG L EE+Y+
Subjt: NQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGETFAPVARLEAIRLLLSYACFWRFKLFQMDVKSAFLNGYLCEEVYVA
Query: QPKGFVDPVHEDHVYKLRKALYRLKQAPRACYERLSTYLLQQGYQRGSADQTMFIYRQG--TDFLIIQIYVDGII
P+G + D+V KL KA+Y LKQA R +E L + + S D+ ++I +G + + + +YVD ++
Subjt: QPKGFVDPVHEDHVYKLRKALYRLKQAPRACYERLSTYLLQQGYQRGSADQTMFIYRQG--TDFLIIQIYVDGII
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.4e-64 | 26.65 | Show/hide |
Query: SDWYFDSGCSRHMTGNADFFSELSECKVGSVVFGDGGKGKIIGKGTI----NHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCNVLDVQNK
S+W D+ S H T D F G+V G+ KI G G I N L DVR + L NLIS L GY+ F + + +
Subjt: SDWYFDSGCSRHMTGNADFFSELSECKVGSVVFGDGGKGKIIGKGTI----NHSGLPFLLDVRLIQGLAANLISISQLCDQGYQVSFNKDRCNVLDVQNK
Query: VFLSGTRLSDNCYHWDAEVTLCNLSKVEE---ARLWHKRLGHLSGATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNISSTSHILELLH
+ ++ Y +AE+ L+ ++ LWHKR+GH+S + + K I +++ C C GKQ + V + +IL+L++
Subjt: VFLSGTRLSDNCYHWDAEVTLCNLSKVEE---ARLWHKRLGHLSGATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNISSTSHILELLH
Query: IDLMGPMQTESLGRKWYAVVCVDDFSRYTWIKFILDKSETFKTCQTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPLTLQQNGVV
D+ GPM+ ES+G Y V +DD SR W+ + K + F+ Q ++RE + ++++D+G E+ ++ F E+C + GI HE + P T Q NGV
Subjt: IDLMGPMQTESLGRKWYAVVCVDDFSRYTWIKFILDKSETFKTCQTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFSAPLTLQQNGVV
Query: ERRNRTLQEMARA-------------EALNTACHIHNRVILRPGTTTTSYELWKGRKPNV---------------KDHRRKWDSKSDRGIFLGYLANSRA
ER NRT+ E R+ EA+ TAC++ NR P +W ++ + K+ R K D KS IF+GY
Subjt: ERRNRTLQEMARA-------------EALNTACHIHNRVILRPGTTTTSYELWKGRKPNV---------------KDHRRKWDSKSDRGIFLGYLANSRA
Query: YRVYNQCSKIVMESINVI-------------------------------------------IDDLGRNLTEIL---------------------------
YR+++ K V+ S +V+ + + G E++
Subjt: YRVYNQCSKIVMESINVI-------------------------------------------IDDLGRNLTEIL---------------------------
Query: ------MMKLRFFGILF-----------------------LINQMKEKLLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQ
+ R+ + L+ M+E++ ++N ++LV P + KW+FK K D + +++R KARLV +G+ Q
Subjt: ------MMKLRFFGILF-----------------------LINQMKEKLLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQ
Query: IEGLDFGETFAPVARLEAIRLLLSYACFWRFKLFQMDVKSAFLNGYLCEEVYVAQPKGFVDPVHEDHVYKLRKALYRLKQAPRACYERLSTYLLQQGYQR
+G+DF E F+PV ++ +IR +LS A ++ Q+DVK+AFL+G L EE+Y+ QP+GF + V KL K+LY LKQAPR Y + +++ Q Y +
Subjt: IEGLDFGETFAPVARLEAIRLLLSYACFWRFKLFQMDVKSAFLNGYLCEEVYVAQPKGFVDPVHEDHVYKLRKALYRLKQAPRACYERLSTYLLQQGYQR
Query: GSADQTMFIYR-QGTDFLIIQIYVDGII
+D ++ R +F+I+ +YVD ++
Subjt: GSADQTMFIYR-QGTDFLIIQIYVDGII
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 8.0e-15 | 40.68 | Show/hide |
Query: MKEKLLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGETFAPVARLEAIRLLLSYA--------CFWRFKL-FQ
M+E+L RN+ W LVP P NI+G KW+FK K +G + R KARLVA+G+ Q EG+ F ET++PV R IR +L+ A W FK+ F
Subjt: MKEKLLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGETFAPVARLEAIRLLLSYA--------CFWRFKL-FQ
Query: MDVKSAFLNGYLCEEVYV
M + F ++C + V
Subjt: MDVKSAFLNGYLCEEVYV
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.0e-38 | 45.4 | Show/hide |
Query: NQVWELVPKPP-YANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGETFAPVARLEAIRLLLSYACFWRFKLFQMDVKSAFLNGYLCEEVYV
N W+LVP PP + I+G +WIF K + +G + R KARLVA+GY+Q GLD+ ETF+PV + +IR++L A + + Q+DV +AFL G L ++VY+
Subjt: NQVWELVPKPP-YANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQIEGLDFGETFAPVARLEAIRLLLSYACFWRFKLFQMDVKSAFLNGYLCEEVYV
Query: AQPKGFVDPVHEDHVYKLRKALYRLKQAPRACYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIIQIYVDGII
+QP GF+D ++V KLRKALY LKQAPRA Y L YLL G+ +D ++F+ ++G + + +YVD I+
Subjt: AQPKGFVDPVHEDHVYKLRKALYRLKQAPRACYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIIQIYVDGII
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.7e-41 | 23.91 | Show/hide |
Query: SVKSP-NSSDWYFDSGCSRHMTGNADFFSELSECKVG-SVVFGDGGKGKIIGKGTINHSGLPFLLD---VRLIQGLAANLISISQLCDQG-YQVSFNKDR
+V SP N+++W DSG + H+T + + S G V+ DG I G+ + LD V + + NLIS+ +LC+ V F
Subjt: SVKSP-NSSDWYFDSGCSRHMTGNADFFSELSECKVG-SVVFGDGGKGKIIGKGTINHSGLPFLLD---VRLIQGLAANLISISQLCDQG-YQVSFNKDR
Query: CNVLDVQNKVFLSGTRLSDNCYHW---DAEVTLCNLSKVEEA--RLWHKRLGHLSGATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNI
V D+ V L + D Y W ++ S +A WH RLGH S A ++ V ++ L P L SCS+C K K I
Subjt: CNVLDVQNKVFLSGTRLSDNCYHW---DAEVTLCNLSKVEEA--RLWHKRLGHLSGATISKVTKVDAIIGLPPLSFLSLESCSECTAGKQVKSVHKPVNI
Query: SSTSHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSRYTWIKFILDKSETFKTCQTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFS
+S S LE ++ D+ S+ Y V+ VD F+RYTW+ + KS+ T + ++ T IG + +D+G EF ++ GI H S
Subjt: SSTSHILELLHIDLMGPMQTESLGRKWYAVVCVDDFSRYTWIKFILDKSETFKTCQTLFTQLQREKNTSIGQIQTDHGHEFENQHFAEFCDNEGIFHEFS
Query: APLTLQQNGVVERRNRTLQEMARA-------------EALNTACHIHNRVILRPGTTTTSYELWKGRKPNVKD---------------HRRKWDSKSDRG
P T + NG+ ER++R + EM A + A ++ NR+ + ++ G+ PN + +R K + KS +
Subjt: APLTLQQNGVVERRNRTLQEMARA-------------EALNTACHIHNRVILRPGTTTTSYELWKGRKPNVKD---------------HRRKWDSKSDRG
Query: IFLGYLANSRAYRVYNQCSKIVMESINVIIDD--------------------------------------------LGRNL---------------TEIL
F+GY AY + + + S +V D+ LG +L T++
Subjt: IFLGYLANSRAYRVYNQCSKIVMESINVIIDD--------------------------------------------LGRNL---------------TEIL
Query: MMKLRFFGI-------------------------------------------------------------------------------------------
L I
Subjt: MMKLRFFGI-------------------------------------------------------------------------------------------
Query: ----LFLIN---------------------------------------------------QMKEKLLQFERNQVWELV-PKPPYANIIGTKWIFKNKTDE
+ +N M ++ N W+LV P PP I+G +WIF K +
Subjt: ----LFLIN---------------------------------------------------QMKEKLLQFERNQVWELV-PKPPYANIIGTKWIFKNKTDE
Query: EGRVIRNKARLVAQGYSQIEGLDFGETFAPVARLEAIRLLLSYACFWRFKLFQMDVKSAFLNGYLCEEVYVAQPKGFVDPVHEDHVYKLRKALYRLKQAP
+G + R KARLVA+GY+Q GLD+ ETF+PV + +IR++L A + + Q+DV +AFL G L +EVY++QP GFVD D+V +LRKA+Y LKQAP
Subjt: EGRVIRNKARLVAQGYSQIEGLDFGETFAPVARLEAIRLLLSYACFWRFKLFQMDVKSAFLNGYLCEEVYVAQPKGFVDPVHEDHVYKLRKALYRLKQAP
Query: RACYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIIQIYVDGII
RA Y L TYLL G+ +D ++F+ ++G + + +YVD I+
Subjt: RACYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIIQIYVDGII
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