; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0016585 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0016585
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionEukaryotic translation initiation factor 3 subunit M
Genome locationchr05:7489111..7490778
RNA-Seq ExpressionPay0016585
SyntenyPay0016585
Gene Ontology termsGO:0001732 - formation of cytoplasmic translation initiation complex (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016282 - eukaryotic 43S preinitiation complex (cellular component)
GO:0033290 - eukaryotic 48S preinitiation complex (cellular component)
GO:0071541 - eukaryotic translation initiation factor 3 complex, eIF3m (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsIPR000717 - Proteasome component (PCI) domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039431.1 eukaryotic translation initiation factor 3 subunit M [Cucumis melo var. makuwa]2.0e-5176.92Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGV---------TC---------
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIK           TC         
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGV---------TC---------

Query:  --VLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV---------RYEWDLL
          VLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV         +++W+ L
Subjt:  --VLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV---------RYEWDLL

KAA0053298.1 eukaryotic translation initiation factor 3 subunit M-like isoform X2 [Cucumis melo var. makuwa]1.9e-57100Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIV
        AITSKLIDCKMDQMNEVVIV
Subjt:  AITSKLIDCKMDQMNEVVIV

TYK00620.1 eukaryotic translation initiation factor 3 subunit M [Cucumis melo var. makuwa]4.4e-5183.82Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIK        LQINDDEVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIV---------RYEWDLL
        AITSKLIDCKMDQMNEVVIV         +++W+ L
Subjt:  AITSKLIDCKMDQMNEVVIV---------RYEWDLL

XP_008467080.1 PREDICTED: eukaryotic translation initiation factor 3 subunit M-like isoform X2 [Cucumis melo]1.9e-57100Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIV
        AITSKLIDCKMDQMNEVVIV
Subjt:  AITSKLIDCKMDQMNEVVIV

XP_016903699.1 PREDICTED: eukaryotic translation initiation factor 3 subunit M-like isoform X1 [Cucumis melo]1.7e-5899.18Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIVRY
        AITSKLIDCKMDQMNEVVIVR+
Subjt:  AITSKLIDCKMDQMNEVVIVRY

TrEMBL top hitse value%identityAlignment
A0A1S3CSW1 eukaryotic translation initiation factor 3 subunit M-like isoform X29.0e-58100Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIV
        AITSKLIDCKMDQMNEVVIV
Subjt:  AITSKLIDCKMDQMNEVVIV

A0A1S4E653 eukaryotic translation initiation factor 3 subunit M-like isoform X18.1e-5999.18Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIVRY
        AITSKLIDCKMDQMNEVVIVR+
Subjt:  AITSKLIDCKMDQMNEVVIVRY

A0A5A7TCS8 Eukaryotic translation initiation factor 3 subunit M9.6e-5276.92Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGV---------TC---------
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIK           TC         
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGV---------TC---------

Query:  --VLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV---------RYEWDLL
          VLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV         +++W+ L
Subjt:  --VLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV---------RYEWDLL

A0A5A7UE08 Eukaryotic translation initiation factor 3 subunit M-like isoform X29.0e-58100Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIV
        AITSKLIDCKMDQMNEVVIV
Subjt:  AITSKLIDCKMDQMNEVVIV

A0A5D3BNN4 Eukaryotic translation initiation factor 3 subunit M2.1e-5183.82Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIK        LQINDDEVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIV---------RYEWDLL
        AITSKLIDCKMDQMNEVVIV         +++W+ L
Subjt:  AITSKLIDCKMDQMNEVVIV---------RYEWDLL

SwissProt top hitse value%identityAlignment
B3NRC6 Eukaryotic translation initiation factor 3 subunit M3.9e-1035.58Show/hide
Query:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQM
        L++ LL IF++++L AY++F   +   + S GL HE  + KMRLL+ + L  +        L K        LQIN+DEVE +V++ + +KL+  ++DQ 
Subjt:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQM

Query:  NEVV
        N  V
Subjt:  NEVV

B4HR14 Eukaryotic translation initiation factor 3 subunit M2.3e-1035.58Show/hide
Query:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQM
        L++ LL IF++++L AY++F   +   + S GL HE  + KMRLL+ + L  +        L K        LQIN+DEVE +V++ + +KL+  ++DQ 
Subjt:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQM

Query:  NEVV
        N+ V
Subjt:  NEVV

B4QFD2 Eukaryotic translation initiation factor 3 subunit M2.3e-1035.58Show/hide
Query:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQM
        L++ LL IF++++L AY++F   +   + S GL HE  + KMRLL+ + L  +        L K        LQIN+DEVE +V++ + +KL+  ++DQ 
Subjt:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQM

Query:  NEVV
        N+ V
Subjt:  NEVV

Q54KZ8 Eukaryotic translation initiation factor 3 subunit M2.5e-2042.62Show/hide
Query:  MPAVGQLEKD--AKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWV
        +PAV  LE    +  SL Y+L+KIF T++LD++++FQ  N + L + GL ++DC+ K+RLLSL  L ++E +++PY+LI        +LQI+++EVE+WV
Subjt:  MPAVGQLEKD--AKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWV

Query:  VKAITSKLIDCKMDQMNEVVIV
        + A+   L+D K+DQ+N +V V
Subjt:  VKAITSKLIDCKMDQMNEVVIV

Q7JVI3 Eukaryotic translation initiation factor 3 subunit M2.3e-1035.58Show/hide
Query:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQM
        L++ LL IF++++L AY++F   +   + S GL HE  + KMRLL+ + L  +        L K        LQIN+DEVE +V++ + +KL+  ++DQ 
Subjt:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQM

Query:  NEVV
        N+ V
Subjt:  NEVV

Arabidopsis top hitse value%identityAlignment
AT3G02200.1 Proteasome component (PCI) domain protein1.5e-4169.42Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
        +PAV QLEKDAKY+ VYQLLKIFLTQRL+AY EFQ ANS  L+SYGL +EDC+ KMRLLSLVDL S+ES +IPY  IK        LQ+N+ +VELW+VK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIVR
        AIT+KLI+CKMDQMN+V+IVR
Subjt:  AITSKLIDCKMDQMNEVVIVR

AT3G02200.2 Proteasome component (PCI) domain protein7.6e-4169.17Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
        +PAV QLEKDAKY+ VYQLLKIFLTQRL+AY EFQ ANS  L+SYGL +EDC+ KMRLLSLVDL S+ES +IPY  IK        LQ+N+ +VELW+VK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIV
        AIT+KLI+CKMDQMN+V+IV
Subjt:  AITSKLIDCKMDQMNEVVIV

AT5G15610.1 Proteasome component (PCI) domain protein6.2e-4370.87Show/hide
Query:  PAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKA
        PAV QLEKD   + VYQLLKIFLTQRLDAYMEFQ ANS  L++YGLV EDC+AKMRLLSLVDL S++S +IPYA IK        LQ+ND+EVELWVVKA
Subjt:  PAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKA

Query:  ITSKLIDCKMDQMNEVVIVRYEWDLLL
        IT+KL+ CKMDQMN+VVIVR   +LLL
Subjt:  ITSKLIDCKMDQMNEVVIVRYEWDLLL

AT5G15610.2 Proteasome component (PCI) domain protein1.5e-4172.27Show/hide
Query:  PAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKA
        PAV QLEKD   + VYQLLKIFLTQRLDAYMEFQ ANS  L++YGLV EDC+AKMRLLSLVDL S++S +IPYA IK        LQ+ND+EVELWVVKA
Subjt:  PAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKA

Query:  ITSKLIDCKMDQMNEVVIV
        IT+KL+ CKMDQMN+VVIV
Subjt:  ITSKLIDCKMDQMNEVVIV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGCTGTAGGGCAACTGGAGAAGGATGCCAAATATTCATTGGTTTATCAGCTTCTGAAGATTTTTTTGACCCAGAGATTGGATGCTTACATGGAATTTCAAGCTGC
AAATTCTTCTTTATTGAAAAGCTATGGTCTCGTCCATGAAGATTGCATTGCAAAGATGAGGTTATTATCATTGGTAGATCTTGGCTCAAATGAATCTGCCCGTATTCCAT
ATGCTCTCATCAAGGGTGTTACTTGTGTGTTACTTGTGCTTCAGATCAATGATGATGAGGTCGAACTGTGGGTCGTGAAGGCCATTACGTCCAAATTGATTGACTGCAAA
ATGGACCAGATGAACGAAGTTGTGATTGTGAGATATGAATGGGATTTATTGTTGCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGCTGTAGGGCAACTGGAGAAGGATGCCAAATATTCATTGGTTTATCAGCTTCTGAAGATTTTTTTGACCCAGAGATTGGATGCTTACATGGAATTTCAAGCTGC
AAATTCTTCTTTATTGAAAAGCTATGGTCTCGTCCATGAAGATTGCATTGCAAAGATGAGGTTATTATCATTGGTAGATCTTGGCTCAAATGAATCTGCCCGTATTCCAT
ATGCTCTCATCAAGGGTGTTACTTGTGTGTTACTTGTGCTTCAGATCAATGATGATGAGGTCGAACTGTGGGTCGTGAAGGCCATTACGTCCAAATTGATTGACTGCAAA
ATGGACCAGATGAACGAAGTTGTGATTGTGAGATATGAATGGGATTTATTGTTGCTTTAA
Protein sequenceShow/hide protein sequence
MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCK
MDQMNEVVIVRYEWDLLLL