; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0016596 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0016596
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr02:14062039..14063517
RNA-Seq ExpressionPay0016596
SyntenyPay0016596
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037745.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]9.0e-21579.27Show/hide
Query:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLN
        MNDELQALEK HTWDYVDLPPGKRPI CKWIYKIKTHSDGTIE YKARLVAKGY QEYGIDYEETFAP                       MDVKNAFLN
Subjt:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLN

Query:  GTLSEEVYMKPPPGTSSPLHK-------------APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQH
        GTLSEEVYMKPPPGTSSP HK             APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQH
Subjt:  GTLSEEVYMKPPPGTSSPLHK-------------APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQH

Query:  FEMKDLGSLNYFLGLEVSRCSD----------------------------------------------DLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMA
        FEMKDLGSLNYFLGLEVSR SD                                               LY+QLVG LIYLTVTRPDIAYAVHIVSQFMA
Subjt:  FEMKDLGSLNYFLGLEVSRCSD----------------------------------------------DLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMA

Query:  APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWL
        APRTIHFTAVLRILRY+KGTLGHGLQFSSQSSLVL GYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVS SSTESEYR LAD TAELLWLRWL
Subjt:  APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWL

Query:  VADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP
        +ADMGVPQQ PTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLS+TLLLQ +STTEQPADIFTKALPSTRFNQ+RTKLKLTATLPP
Subjt:  VADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP

KAA0041601.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]9.0e-21579.27Show/hide
Query:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLN
        MNDELQALEK HTWDYVDLPPGKRPI CKWIYKIKTHSDGTIE YKARLVAKGY QEYGIDYEETFAP                       MDVKNAFLN
Subjt:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLN

Query:  GTLSEEVYMKPPPGTSSPLHK-------------APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQH
        GTLSEEVYMKPPPGTSSP HK             APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQH
Subjt:  GTLSEEVYMKPPPGTSSPLHK-------------APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQH

Query:  FEMKDLGSLNYFLGLEVSRCSD----------------------------------------------DLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMA
        FEMKDLGSLNYFLGLEVSR SD                                               LY+QLVG LIYLTVTRPDIAYAVHIVSQFMA
Subjt:  FEMKDLGSLNYFLGLEVSRCSD----------------------------------------------DLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMA

Query:  APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWL
        APRTIHFTAVLRILRY+KGTLGHGLQFSSQSSLVL GYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVS SSTESEYR LAD TAELLWLRWL
Subjt:  APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWL

Query:  VADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP
        +ADMGVPQQ PTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLS+TLLLQ +STTEQPADIFTKALPSTRFNQ+RTKLKLTATLPP
Subjt:  VADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP

KAA0050089.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.4e-22382.75Show/hide
Query:  QALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLNGTLSE
        +ALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP                       MDVKNAFLNGTLSE
Subjt:  QALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLNGTLSE

Query:  EVYMKPPPGTSSPLHK-------------APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKD
        EVYMKPPPGTSSPLHK             APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKD
Subjt:  EVYMKPPPGTSSPLHK-------------APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKD

Query:  LGSLNYFLGLEVSRCSDD----------------------------------------------LYQQLVGRLIYLTVTRPDIAYAVHIVSQFMAAPRTI
        LGSLNYFLGLEVSRCSD+                                              LYQQLVGRLIYLTVTRPDIAYAVHIVSQFMAAPRTI
Subjt:  LGSLNYFLGLEVSRCSDD----------------------------------------------LYQQLVGRLIYLTVTRPDIAYAVHIVSQFMAAPRTI

Query:  HFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWLVADMG
        HFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWLVADMG
Subjt:  HFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWLVADMG

Query:  VPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP
        VPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP
Subjt:  VPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP

KAA0057482.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.5e-21479.47Show/hide
Query:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLN
        MNDELQALEKTHTWDYVDLPPGKRPI CKWIYKIKTHSDGTIE YKARLVAKGY QEYGIDYEETFAP                       +DVKNAFLN
Subjt:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLN

Query:  GTLSEEVYMKPPPGTSSPLHK-------------APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQH
        GTLSEEVYMKPPPGTSSP HK             APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDP AISDLQHYLGQH
Subjt:  GTLSEEVYMKPPPGTSSPLHK-------------APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQH

Query:  FEMKDLGSLNYFLGLEVSRCSD----------------------------------------------DLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMA
        FEMKDLGSLNYFLG EVSR SD                                               LY+QLVG LIYLTVTRPDIAY VHIVSQFMA
Subjt:  FEMKDLGSLNYFLGLEVSRCSD----------------------------------------------DLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMA

Query:  APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWL
        APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVL GYSDADW GDPTDRRSTTGYCFYLGDSLISWRSKKQSVVS SSTESEYR LADTTAELLWLRWL
Subjt:  APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWL

Query:  VADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP
        +ADMGVPQQ PTLL+CDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP
Subjt:  VADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP

TYK04714.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.6e-21479.07Show/hide
Query:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLN
        MNDELQALEK HTWDYVDLPPGKRPI CKWIYKIKTHSDGTIE YKARLVAKGY QEYGIDYEETFAP                       MDVKNAFLN
Subjt:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLN

Query:  GTLSEEVYMKPPPGTSSPLHK-------------APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQH
        GTLSEEVYMKPPPGTSSP HK             APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQH
Subjt:  GTLSEEVYMKPPPGTSSPLHK-------------APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQH

Query:  FEMKDLGSLNYFLGLEVSRCSD----------------------------------------------DLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMA
        FEMKDLGSLNYFLGLEVSR SD                                               LY+QLVG LIYLTVTRPDIAYAVHIVSQFMA
Subjt:  FEMKDLGSLNYFLGLEVSRCSD----------------------------------------------DLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMA

Query:  APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWL
        APRTIHFTAVLRILRY+KGTLGHGLQFSSQSSLVL GYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVS SSTESEYR LAD TAELLWLRWL
Subjt:  APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWL

Query:  VADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP
        +ADMGVPQQ PTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLS+TLLLQ +STTEQPADIFTKALPSTRFNQ+RTKLKLTA+LPP
Subjt:  VADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP

TrEMBL top hitse value%identityAlignment
A0A5A7T8F2 Retrovirus-related Pol polyprotein from transposon TNT 1-944.4e-21579.27Show/hide
Query:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLN
        MNDELQALEK HTWDYVDLPPGKRPI CKWIYKIKTHSDGTIE YKARLVAKGY QEYGIDYEETFAP                       MDVKNAFLN
Subjt:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLN

Query:  GTLSEEVYMKPPPGTSSPLHK-------------APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQH
        GTLSEEVYMKPPPGTSSP HK             APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQH
Subjt:  GTLSEEVYMKPPPGTSSPLHK-------------APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQH

Query:  FEMKDLGSLNYFLGLEVSRCSD----------------------------------------------DLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMA
        FEMKDLGSLNYFLGLEVSR SD                                               LY+QLVG LIYLTVTRPDIAYAVHIVSQFMA
Subjt:  FEMKDLGSLNYFLGLEVSRCSD----------------------------------------------DLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMA

Query:  APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWL
        APRTIHFTAVLRILRY+KGTLGHGLQFSSQSSLVL GYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVS SSTESEYR LAD TAELLWLRWL
Subjt:  APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWL

Query:  VADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP
        +ADMGVPQQ PTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLS+TLLLQ +STTEQPADIFTKALPSTRFNQ+RTKLKLTATLPP
Subjt:  VADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP

A0A5A7U9B9 Putative mitochondrial protein6.7e-22482.75Show/hide
Query:  QALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLNGTLSE
        +ALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP                       MDVKNAFLNGTLSE
Subjt:  QALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLNGTLSE

Query:  EVYMKPPPGTSSPLHK-------------APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKD
        EVYMKPPPGTSSPLHK             APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKD
Subjt:  EVYMKPPPGTSSPLHK-------------APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKD

Query:  LGSLNYFLGLEVSRCSDD----------------------------------------------LYQQLVGRLIYLTVTRPDIAYAVHIVSQFMAAPRTI
        LGSLNYFLGLEVSRCSD+                                              LYQQLVGRLIYLTVTRPDIAYAVHIVSQFMAAPRTI
Subjt:  LGSLNYFLGLEVSRCSDD----------------------------------------------LYQQLVGRLIYLTVTRPDIAYAVHIVSQFMAAPRTI

Query:  HFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWLVADMG
        HFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWLVADMG
Subjt:  HFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWLVADMG

Query:  VPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP
        VPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP
Subjt:  VPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP

A0A5A7UNP5 Putative mitochondrial protein7.4e-21579.47Show/hide
Query:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLN
        MNDELQALEKTHTWDYVDLPPGKRPI CKWIYKIKTHSDGTIE YKARLVAKGY QEYGIDYEETFAP                       +DVKNAFLN
Subjt:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLN

Query:  GTLSEEVYMKPPPGTSSPLHK-------------APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQH
        GTLSEEVYMKPPPGTSSP HK             APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDP AISDLQHYLGQH
Subjt:  GTLSEEVYMKPPPGTSSPLHK-------------APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQH

Query:  FEMKDLGSLNYFLGLEVSRCSD----------------------------------------------DLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMA
        FEMKDLGSLNYFLG EVSR SD                                               LY+QLVG LIYLTVTRPDIAY VHIVSQFMA
Subjt:  FEMKDLGSLNYFLGLEVSRCSD----------------------------------------------DLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMA

Query:  APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWL
        APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVL GYSDADW GDPTDRRSTTGYCFYLGDSLISWRSKKQSVVS SSTESEYR LADTTAELLWLRWL
Subjt:  APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWL

Query:  VADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP
        +ADMGVPQQ PTLL+CDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP
Subjt:  VADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP

A0A5A7VIT8 Retrovirus-related Pol polyprotein from transposon TNT 1-944.4e-21579.27Show/hide
Query:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLN
        MNDELQALEK HTWDYVDLPPGKRPI CKWIYKIKTHSDGTIE YKARLVAKGY QEYGIDYEETFAP                       MDVKNAFLN
Subjt:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLN

Query:  GTLSEEVYMKPPPGTSSPLHK-------------APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQH
        GTLSEEVYMKPPPGTSSP HK             APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQH
Subjt:  GTLSEEVYMKPPPGTSSPLHK-------------APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQH

Query:  FEMKDLGSLNYFLGLEVSRCSD----------------------------------------------DLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMA
        FEMKDLGSLNYFLGLEVSR SD                                               LY+QLVG LIYLTVTRPDIAYAVHIVSQFMA
Subjt:  FEMKDLGSLNYFLGLEVSRCSD----------------------------------------------DLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMA

Query:  APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWL
        APRTIHFTAVLRILRY+KGTLGHGLQFSSQSSLVL GYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVS SSTESEYR LAD TAELLWLRWL
Subjt:  APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWL

Query:  VADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP
        +ADMGVPQQ PTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLS+TLLLQ +STTEQPADIFTKALPSTRFNQ+RTKLKLTATLPP
Subjt:  VADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP

A0A5D3C0D7 Retrovirus-related Pol polyprotein from transposon TNT 1-941.3e-21479.07Show/hide
Query:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLN
        MNDELQALEK HTWDYVDLPPGKRPI CKWIYKIKTHSDGTIE YKARLVAKGY QEYGIDYEETFAP                       MDVKNAFLN
Subjt:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLN

Query:  GTLSEEVYMKPPPGTSSPLHK-------------APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQH
        GTLSEEVYMKPPPGTSSP HK             APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQH
Subjt:  GTLSEEVYMKPPPGTSSPLHK-------------APRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQH

Query:  FEMKDLGSLNYFLGLEVSRCSD----------------------------------------------DLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMA
        FEMKDLGSLNYFLGLEVSR SD                                               LY+QLVG LIYLTVTRPDIAYAVHIVSQFMA
Subjt:  FEMKDLGSLNYFLGLEVSRCSD----------------------------------------------DLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMA

Query:  APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWL
        APRTIHFTAVLRILRY+KGTLGHGLQFSSQSSLVL GYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVS SSTESEYR LAD TAELLWLRWL
Subjt:  APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWL

Query:  VADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP
        +ADMGVPQQ PTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLS+TLLLQ +STTEQPADIFTKALPSTRFNQ+RTKLKLTA+LPP
Subjt:  VADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP

SwissProt top hitse value%identityAlignment
P04146 Copia protein5.2e-7233.4Show/hide
Query:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLN
        +N EL A +  +TW     P  K  +  +W++ +K +  G    YKARLVA+G+ Q+Y IDYEETFAP                       MDVK AFLN
Subjt:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLN

Query:  GTLSEEVYMKPPPGTSS-------------PLHKAPRAWFATFSSTITQLGFTSSPHDTALF--TRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLG
        GTL EE+YM+ P G S               L +A R WF  F   + +  F +S  D  ++   +      + +LLYVDD++I   D   +++ + YL 
Subjt:  GTLSEEVYMKPPPGTSS-------------PLHKAPRAWFATFSSTITQLGFTSSPHDTALF--TRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLG

Query:  QHFEMKDLGSLNYFLGLEVSRCSDDLY---------------------------------------------QQLVGRLIYLTV-TRPDIAYAVHIVSQF
        + F M DL  + +F+G+ +    D +Y                                             + L+G L+Y+ + TRPD+  AV+I+S++
Subjt:  QHFEMKDLGSLNYFLGLEVSRCSDDLY---------------------------------------------QQLVGRLIYLTV-TRPDIAYAVHIVSQF

Query:  MAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSL--VLFGYSDADWAGDPTDRRSTTGYCFYLGD-SLISWRSKKQSVVSHSSTESEYRTLADTTAELL
         +   +  +  + R+LRY+KGT+   L F    +    + GY D+DWAG   DR+STTGY F + D +LI W +K+Q+ V+ SSTE+EY  L +   E L
Subjt:  MAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSL--VLFGYSDADWAGDPTDRRSTTGYCFYLGD-SLISWRSKKQSVVSHSSTESEYRTLADTTAELL

Query:  WLRWLVADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKL
        WL++L+  + +  ++P  ++ DN+  I IA+N   H+R KHI+   HF R  + +N + L+ + T  Q ADIFTK LP+ RF +LR KL L
Subjt:  WLRWLVADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.8e-7534.97Show/hide
Query:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLN
        M +E+++L+K  T+  V+LP GKRP+ CKW++K+K   D  +  YKARLV KG+ Q+ GID++E F+P                       +DVK AFL+
Subjt:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLN

Query:  GTLSEEVYMKPPPG---------------TSSPLHKAPRAWFATFSSTITQLGFTSSPHDTAL-FTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYL
        G L EE+YM+ P G               +   L +APR W+  F S +    +  +  D  + F R +    ++LLLYVDDM+I G D   I+ L+  L
Subjt:  GTLSEEVYMKPPPG---------------TSSPLHKAPRAWFATFSSTITQLGFTSSPHDTAL-FTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYL

Query:  GQHFEMKDLGSLNYFLGLEVSR--------------------------------------------CSDDL----------YQQLVGRLIYLTV-TRPDI
         + F+MKDLG     LG+++ R                                            C   +          Y   VG L+Y  V TRPDI
Subjt:  GQHFEMKDLGSLNYFLGLEVSR--------------------------------------------CSDDL----------YQQLVGRLIYLTV-TRPDI

Query:  AYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLA
        A+AV +VS+F+  P   H+ AV  ILRY++GT G  L F   S  +L GY+DAD AGD  +R+S+TGY F      ISW+SK Q  V+ S+TE+EY    
Subjt:  AYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLA

Query:  DTTAELLWLRWLVADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRF
        +T  E++WL+  + ++G+  Q   +++CD++SAI ++ N ++H RTKHI+   H+IR  +   +L +  +ST E PAD+ TK +P  +F
Subjt:  DTTAELLWLRWLVADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRF

P92519 Uncharacterized mitochondrial protein AtMg008103.2e-3739.91Show/hide
Query:  LLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDDL---------------------------------------------YQQ
        LLLYVDD+++TG+    ++ L   L   F MKDLG ++YFLG+++      L                                             ++ 
Subjt:  LLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDDL---------------------------------------------YQQ

Query:  LVGRLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQS
        +VG L YLT+TRPDI+YAV+IV Q M  P    F  + R+LRY+KGT+ HGL     S L +  + D+DWAG  + RRSTTG+C +LG ++ISW +K+Q 
Subjt:  LVGRLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQS

Query:  VVSHSSTESEYRTLADTTAELLW
         VS SSTE+EYR LA T AEL W
Subjt:  VVSHSSTESEYRTLADTTAELLW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.2e-8939.27Show/hide
Query:  MNDELQALEKTHTWDYVDLPPGKRPI-SCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFL
        M  E+ A    HTWD V  PP    I  C+WI+  K +SDG++  YKARLVAKGY Q  G+DY ETF+P                       +DV NAFL
Subjt:  MNDELQALEKTHTWDYVDLPPGKRPI-SCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFL

Query:  NGTLSEEVYMKPPPGTSSP---------------LHKAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYL
         GTL+++VYM  PPG                   L +APRAW+    + +  +GF +S  DT+LF     + IV +L+YVDD++ITGNDP  + +    L
Subjt:  NGTLSEEVYMKPPPGTSSP---------------LHKAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYL

Query:  GQHFEMKDLGSLNYFLGLEVSRCSDDL----------------------------------------------YQQLVGRLIYLTVTRPDIAYAVHIVSQ
         Q F +KD   L+YFLG+E  R    L                                              Y+ +VG L YL  TRPDI+YAV+ +SQ
Subjt:  GQHFEMKDLGSLNYFLGLEVSRCSDDL----------------------------------------------YQQLVGRLIYLTVTRPDIAYAVHIVSQ

Query:  FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWL
        FM  P   H  A+ RILRY+ GT  HG+     ++L L  YSDADWAGD  D  ST GY  YLG   ISW SKKQ  V  SSTE+EYR++A+T++E+ W+
Subjt:  FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWL

Query:  RWLVADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLP
          L+ ++G+    P +++CDN  A  +  N VFH R KHI  D HFIR+ + S  L +  VST +Q AD  TK L  T F    +K+ +T   P
Subjt:  RWLVADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLP

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.2e-8638.06Show/hide
Query:  MNDELQALEKTHTWDYVDLPPGKRPI-SCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFL
        M  E+ A    HTWD V  PP    I  C+WI+  K +SDG++  YKARLVAKGY Q  G+DY ETF+P                       +DV NAFL
Subjt:  MNDELQALEKTHTWDYVDLPPGKRPI-SCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFL

Query:  NGTLSEEVYMKPPPGTSSP---------------LHKAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYL
         GTL++EVYM  PPG                   L +APRAW+    + +  +GF +S  DT+LF     + I+ +L+YVDD++ITGND   +      L
Subjt:  NGTLSEEVYMKPPPGTSSP---------------LHKAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYL

Query:  GQHFEMKDLGSLNYFLGLEVSRCSDDL----------------------------------------------YQQLVGRLIYLTVTRPDIAYAVHIVSQ
         Q F +K+   L+YFLG+E  R    L                                              Y+ +VG L YL  TRPD++YAV+ +SQ
Subjt:  GQHFEMKDLGSLNYFLGLEVSRCSDDL----------------------------------------------YQQLVGRLIYLTVTRPDIAYAVHIVSQ

Query:  FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWL
        +M  P   H+ A+ R+LRY+ GT  HG+     ++L L  YSDADWAGD  D  ST GY  YLG   ISW SKKQ  V  SSTE+EYR++A+T++EL W+
Subjt:  FMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWL

Query:  RWLVADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLP
          L+ ++G+    P +++CDN  A  +  N VFH R KHI  D HFIR+ + S  L +  VST +Q AD  TK L    F     K+ +    P
Subjt:  RWLVADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLP

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.3e-9943.68Show/hide
Query:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLN
        M+DE+ A+E THTW+   LPP K+PI CKW+YKIK +SDGTIE YKARLVAKGY Q+ GID+ ETF+P                       +D+ NAFLN
Subjt:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAP-----------------------MDVKNAFLN

Query:  GTLSEEVYMKPPPGTSS-------------------PLHKAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQ
        G L EE+YMK PPG ++                    L +A R WF  FS T+   GF  S  D   F + T    + +L+YVDD+II  N+  A+ +L+
Subjt:  GTLSEEVYMKPPPGTSS-------------------PLHKAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQ

Query:  HYLGQHFEMKDLGSLNYFLGLEVSRCSDDL----------------------------------------------YQQLVGRLIYLTVTRPDIAYAVHI
          L   F+++DLG L YFLGLE++R +  +                                              Y++L+GRL+YL +TR DI++AV+ 
Subjt:  HYLGQHFEMKDLGSLNYFLGLEVSRCSDDL----------------------------------------------YQQLVGRLIYLTVTRPDIAYAVHI

Query:  VSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAEL
        +SQF  APR  H  AV++IL YIKGT+G GL +SSQ+ + L  +SDA +      RRST GYC +LG SLISW+SKKQ VVS SS E+EYR L+  T E+
Subjt:  VSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAEL

Query:  LWLRWLVADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIR
        +WL     ++ +P   PTLL CDN +AI IA N VFHERTKHIE+DCH +R
Subjt:  LWLRWLVADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIR

ATMG00240.1 Gag-Pol-related retrotransposon family protein7.5e-1850.63Show/hide
Query:  IYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYC
        +YLT+TRPD+ +AV+ +SQF +A RT    AV ++L Y+KGT+G GL +S+ S L L  ++D+DWA  P  RRS TG+C
Subjt:  IYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYC

ATMG00810.1 DNA/RNA polymerases superfamily protein2.2e-3839.91Show/hide
Query:  LLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDDL---------------------------------------------YQQ
        LLLYVDD+++TG+    ++ L   L   F MKDLG ++YFLG+++      L                                             ++ 
Subjt:  LLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDDL---------------------------------------------YQQ

Query:  LVGRLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQS
        +VG L YLT+TRPDI+YAV+IV Q M  P    F  + R+LRY+KGT+ HGL     S L +  + D+DWAG  + RRSTTG+C +LG ++ISW +K+Q 
Subjt:  LVGRLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQS

Query:  VVSHSSTESEYRTLADTTAELLW
         VS SSTE+EYR LA T AEL W
Subjt:  VVSHSSTESEYRTLADTTAELLW

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)4.6e-1549.28Show/hide
Query:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAPM
        M +EL AL +  TW  V  P  +  + CKW++K K HSDGT++  KARLVAKG+ QE GI + ET++P+
Subjt:  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAPM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGATGAATTACAGGCTCTTGAAAAGACGCACACTTGGGACTATGTTGACTTACCTCCTGGTAAAAGACCCATTAGCTGTAAGTGGATCTACAAAATCAAGACTCA
CTCTGATGGTACTATTGAGCATTATAAGGCTCGTCTTGTAGCAAAAGGGTATTTCCAAGAATATGGTATTGACTATGAAGAAACATTTGCTCCTATGGATGTAAAAAATG
CTTTTCTTAATGGGACTCTTTCTGAAGAAGTCTATATGAAGCCACCTCCTGGTACTTCTTCTCCTCTTCACAAGGCTCCACGAGCTTGGTTTGCCACATTTAGCTCTACC
ATCACTCAACTTGGTTTTACTTCTAGTCCTCATGACACTGCACTCTTTACTCGCCACACACCCCAGGGTATTGTTCTTCTTCTTCTCTATGTTGATGACATGATTATCAC
TGGTAATGATCCACATGCCATATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAGACCTTGGATCTCTCAACTACTTTCTTGGCCTTGAAGTCTCTCGAT
GCTCGGACGATCTGTATCAGCAACTCGTTGGCCGTCTCATCTATCTAACAGTGACTCGTCCAGACATTGCATATGCTGTTCACATTGTTAGCCAATTTATGGCTGCTCCT
CGAACCATCCACTTTACTGCCGTACTACGTATCCTTCGCTATATCAAGGGAACTTTGGGGCATGGACTTCAATTTTCTTCTCAATCCTCTCTCGTATTATTTGGCTATTC
TGATGCAGATTGGGCTGGGGATCCCACTGATCGGCGTTCTACAACAGGCTACTGCTTCTACTTAGGCGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCT
CTCATTCTAGTACTGAATCAGAATATCGCACTCTTGCTGATACTACCGCCGAACTTTTATGGCTTCGTTGGCTTGTTGCTGATATGGGTGTTCCCCAGCAGAGTCCCACT
CTCCTTCATTGTGATAATCGTAGTGCCATCCAAATTGCCCACAATGATGTTTTCCATGAGCGTACAAAGCACATCGAAAATGATTGTCACTTCATTCGTCATCATCTCTT
GAGTAACACACTTCTTTTGCAACCTGTATCTACCACTGAGCAACCAGCTGATATCTTCACCAAAGCCTTACCATCTACTCGCTTCAATCAATTGCGTACCAAACTCAAGC
TGACAGCTACTCTACCACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGATGAATTACAGGCTCTTGAAAAGACGCACACTTGGGACTATGTTGACTTACCTCCTGGTAAAAGACCCATTAGCTGTAAGTGGATCTACAAAATCAAGACTCA
CTCTGATGGTACTATTGAGCATTATAAGGCTCGTCTTGTAGCAAAAGGGTATTTCCAAGAATATGGTATTGACTATGAAGAAACATTTGCTCCTATGGATGTAAAAAATG
CTTTTCTTAATGGGACTCTTTCTGAAGAAGTCTATATGAAGCCACCTCCTGGTACTTCTTCTCCTCTTCACAAGGCTCCACGAGCTTGGTTTGCCACATTTAGCTCTACC
ATCACTCAACTTGGTTTTACTTCTAGTCCTCATGACACTGCACTCTTTACTCGCCACACACCCCAGGGTATTGTTCTTCTTCTTCTCTATGTTGATGACATGATTATCAC
TGGTAATGATCCACATGCCATATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAGACCTTGGATCTCTCAACTACTTTCTTGGCCTTGAAGTCTCTCGAT
GCTCGGACGATCTGTATCAGCAACTCGTTGGCCGTCTCATCTATCTAACAGTGACTCGTCCAGACATTGCATATGCTGTTCACATTGTTAGCCAATTTATGGCTGCTCCT
CGAACCATCCACTTTACTGCCGTACTACGTATCCTTCGCTATATCAAGGGAACTTTGGGGCATGGACTTCAATTTTCTTCTCAATCCTCTCTCGTATTATTTGGCTATTC
TGATGCAGATTGGGCTGGGGATCCCACTGATCGGCGTTCTACAACAGGCTACTGCTTCTACTTAGGCGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCT
CTCATTCTAGTACTGAATCAGAATATCGCACTCTTGCTGATACTACCGCCGAACTTTTATGGCTTCGTTGGCTTGTTGCTGATATGGGTGTTCCCCAGCAGAGTCCCACT
CTCCTTCATTGTGATAATCGTAGTGCCATCCAAATTGCCCACAATGATGTTTTCCATGAGCGTACAAAGCACATCGAAAATGATTGTCACTTCATTCGTCATCATCTCTT
GAGTAACACACTTCTTTTGCAACCTGTATCTACCACTGAGCAACCAGCTGATATCTTCACCAAAGCCTTACCATCTACTCGCTTCAATCAATTGCGTACCAAACTCAAGC
TGACAGCTACTCTACCACCTTGA
Protein sequenceShow/hide protein sequence
MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAPMDVKNAFLNGTLSEEVYMKPPPGTSSPLHKAPRAWFATFSST
ITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDDLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMAAP
RTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWLVADMGVPQQSPT
LLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP