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Pay0016649 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0016649
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionTransducin beta-like protein 2
Genome locationchr01:26389614..26391413
RNA-Seq ExpressionPay0016649
SyntenyPay0016649
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0032012 - regulation of ARF protein signal transduction (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0005829 - cytosol (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005085 - guanyl-nucleotide exchange factor activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR001208 - MCM domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051331.1 transducin beta-like protein 2 [Cucumis melo var. makuwa]2.2e-1158.44Show/hide
Query:  MGDSGVVKS-LFKHIIN-------------------------DQNKKHHPLDFNTLKGHEDSATGLCFSSDGSNLTT
        MGDSGV KS L KHIIN                         DQNKKHHPLD NTLKGH DS+TGLCFSSDGSNL T
Subjt:  MGDSGVVKS-LFKHIIN-------------------------DQNKKHHPLDFNTLKGHEDSATGLCFSSDGSNLTT
TYK23884.1 putative tRNA pseudouridine synthase Pus10 [Cucumis melo var. makuwa]2.6e-1762.07Show/hide
Query:  EIRGDLHICLMGDSGVVKS-LFKHIIN-------------------------DQNKKHHPLDFNTLKGHEDSATGLCFSSDGSNLTT
        +IRGDLHICLMGDSGV KS L KHIIN                         DQNKKHHPLD NTLKGH DS+TGLCFSSDGSNL T
Subjt:  EIRGDLHICLMGDSGVVKS-LFKHIIN-------------------------DQNKKHHPLDFNTLKGHEDSATGLCFSSDGSNLTT
XP_004133912.1 transducin beta-like protein 2 [Cucumis sativus]3.8e-0888.57Show/hide
Query:  DQNKKHHPLDFNTLKGHEDSATGLCFSSDGSNLTT
        DQNKKHHPLD NTLKGH DS TGLCFSSDGSNL T
Subjt:  DQNKKHHPLDFNTLKGHEDSATGLCFSSDGSNLTT
XP_004134717.2 uncharacterized protein LOC101207805 [Cucumis sativus]2.2e-0858.57Show/hide
Query:  LHGEKLVGSKPNKVKNNVKPQMAINSVANQAKRTSIQSEIRGDLHICLMGDSGVVKSLFKHIINDQNKKH
        L GEKLVGSKPNKVKNNVKPQMAINSVANQ K++SI SEI       +  DS    ++    I +  KKH
Subjt:  LHGEKLVGSKPNKVKNNVKPQMAINSVANQAKRTSIQSEIRGDLHICLMGDSGVVKSLFKHIINDQNKKH
XP_008439876.1 PREDICTED: uncharacterized protein LOC103484532 [Cucumis melo]1.5e-0961.43Show/hide
Query:  LHGEKLVGSKPNKVKNNVKPQMAINSVANQAKRTSIQSEIRGDLHICLMGDSGVVKSLFKHIINDQNKKH
        L GEKLVGSKPNKVKNNVKPQMAINSVANQAKRTSI SE+       +  DS    ++    I +  KKH
Subjt:  LHGEKLVGSKPNKVKNNVKPQMAINSVANQAKRTSIQSEIRGDLHICLMGDSGVVKSLFKHIINDQNKKH
TrEMBL top hitse value%identityAlignment
A0A0A0KNA8 Uncharacterized protein1.1e-0858.57Show/hide
Query:  LHGEKLVGSKPNKVKNNVKPQMAINSVANQAKRTSIQSEIRGDLHICLMGDSGVVKSLFKHIINDQNKKH
        L GEKLVGSKPNKVKNNVKPQMAINSVANQ K++SI SEI       +  DS    ++    I +  KKH
Subjt:  LHGEKLVGSKPNKVKNNVKPQMAINSVANQAKRTSIQSEIRGDLHICLMGDSGVVKSLFKHIINDQNKKH
A0A1S3B0I3 uncharacterized protein LOC1034845327.5e-1061.43Show/hide
Query:  LHGEKLVGSKPNKVKNNVKPQMAINSVANQAKRTSIQSEIRGDLHICLMGDSGVVKSLFKHIINDQNKKH
        L GEKLVGSKPNKVKNNVKPQMAINSVANQAKRTSI SE+       +  DS    ++    I +  KKH
Subjt:  LHGEKLVGSKPNKVKNNVKPQMAINSVANQAKRTSIQSEIRGDLHICLMGDSGVVKSLFKHIINDQNKKH
A0A5A7UCQ4 Transducin beta-like protein 21.0e-1158.44Show/hide
Query:  MGDSGVVKS-LFKHIIN-------------------------DQNKKHHPLDFNTLKGHEDSATGLCFSSDGSNLTT
        MGDSGV KS L KHIIN                         DQNKKHHPLD NTLKGH DS+TGLCFSSDGSNL T
Subjt:  MGDSGVVKS-LFKHIIN-------------------------DQNKKHHPLDFNTLKGHEDSATGLCFSSDGSNLTT
A0A5A7UDX2 Tetratricopeptide repeat-like superfamily protein, putative isoform 17.5e-1061.43Show/hide
Query:  LHGEKLVGSKPNKVKNNVKPQMAINSVANQAKRTSIQSEIRGDLHICLMGDSGVVKSLFKHIINDQNKKH
        L GEKLVGSKPNKVKNNVKPQMAINSVANQAKRTSI SE+       +  DS    ++    I +  KKH
Subjt:  LHGEKLVGSKPNKVKNNVKPQMAINSVANQAKRTSIQSEIRGDLHICLMGDSGVVKSLFKHIINDQNKKH
A0A5D3DJR6 DNA replication licensing factor MCM71.3e-1762.07Show/hide
Query:  EIRGDLHICLMGDSGVVKS-LFKHIIN-------------------------DQNKKHHPLDFNTLKGHEDSATGLCFSSDGSNLTT
        +IRGDLHICLMGDSGV KS L KHIIN                         DQNKKHHPLD NTLKGH DS+TGLCFSSDGSNL T
Subjt:  EIRGDLHICLMGDSGVVKS-LFKHIIN-------------------------DQNKKHHPLDFNTLKGHEDSATGLCFSSDGSNLTT
SwissProt top hitse value%identityAlignment
B8BMI1 DNA replication licensing factor MCM73.5e-0451.02Show/hide
Query:  NVKPQMAINSVANQAKRTSIQSEIRGDLHICLMGDSGVVKS-LFKHIIN
        +VK  + +  V    ++ +   +IRGDLHICLMGD GV KS L KHIIN
Subjt:  NVKPQMAINSVANQAKRTSIQSEIRGDLHICLMGDSGVVKS-LFKHIIN
Q2QNM1 DNA replication licensing factor MCM73.5e-0451.02Show/hide
Query:  NVKPQMAINSVANQAKRTSIQSEIRGDLHICLMGDSGVVKS-LFKHIIN
        +VK  + +  V    ++ +   +IRGDLHICLMGD GV KS L KHIIN
Subjt:  NVKPQMAINSVANQAKRTSIQSEIRGDLHICLMGDSGVVKS-LFKHIIN
Arabidopsis top hitse value%identityAlignment
AT4G00090.1 Transducin/WD40 repeat-like superfamily protein7.4e-1074.29Show/hide
Query:  DQNKKHHPLDFNTLKGHEDSATGLCFSSDGSNLTT
        +QNK+HHPLD NTLKGH D+ TGLCFSSDG +L T
Subjt:  DQNKKHHPLDFNTLKGHEDSATGLCFSSDGSNLTT
AT4G02060.1 Minichromosome maintenance (MCM2/3/5) family protein7.1e-0577.78Show/hide
Query:  EIRGDLHICLMGDSGVVKS-LFKHIIN
        +IRGD+HICLMGD GV KS L KHIIN
Subjt:  EIRGDLHICLMGDSGVVKS-LFKHIIN
AT4G02060.2 Minichromosome maintenance (MCM2/3/5) family protein7.1e-0577.78Show/hide
Query:  EIRGDLHICLMGDSGVVKS-LFKHIIN
        +IRGD+HICLMGD GV KS L KHIIN
Subjt:  EIRGDLHICLMGDSGVVKS-LFKHIIN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCAACACCAAAGCTTTTGCATGGAGAAAAGTTGGTTGGTTCTAAGCCTAACAAAGTGAAAAACAATGTTAAGCCACAAATGGCAATCAATTCGGTTGCCAATCA
AGCTAAAAGGACCTCAATACAGTCTGAAATTAGAGGAGACTTGCATATTTGTTTGATGGGTGATTCTGGAGTTGTCAAGAGTCTTTTTAAGCACATCATCAATGATCAAA
ACAAGAAACATCACCCGTTAGATTTCAATACACTGAAAGGTCATGAAGATTCTGCCACTGGATTATGCTTCTCCTCAGATGGAAGTAATCTGACGACTGGTAACTTGGTT
AATCCTACTATATCAAACTTTTGTTCACTTGATATTACCTTTTGCTGTTGTTGCTTATATGCTTTGACGAAAGGGAAATATAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCAACACCAAAGCTTTTGCATGGAGAAAAGTTGGTTGGTTCTAAGCCTAACAAAGTGAAAAACAATGTTAAGCCACAAATGGCAATCAATTCGGTTGCCAATCA
AGCTAAAAGGACCTCAATACAGTCTGAAATTAGAGGAGACTTGCATATTTGTTTGATGGGTGATTCTGGAGTTGTCAAGAGTCTTTTTAAGCACATCATCAATGATCAAA
ACAAGAAACATCACCCGTTAGATTTCAATACACTGAAAGGTCATGAAGATTCTGCCACTGGATTATGCTTCTCCTCAGATGGAAGTAATCTGACGACTGGTAACTTGGTT
AATCCTACTATATCAAACTTTTGTTCACTTGATATTACCTTTTGCTGTTGTTGCTTATATGCTTTGACGAAAGGGAAATATAGATAACTAAAGTCATAATGTGAATATTG
CCTCTACCTACATTTTATTTGCGCTCATGGCTGAAGAATTTTTAATTGAAACTCTCTCTGTAAAATCATTTTCCAAGCAATAATTTTATGTGTTGCTGATTTTTTTGTTA
AATAAAGGTGATGGTTGGAGGCTGTAAAATTCAATGAAAGAAAAATATATTTAGTGTATTGTGTTTGATAAGTTACATACTAAATAAATTATTAAGGTATTACGACACAT
AAAATAGAAAAGTCTATAAAATTTGAATGAGATCCAAACAAGAAAATATATATGATTGGCCAAGAACTTGATTAAAAGCTAAAGTATCTTAAAGAGTTGGTTACGGC
Protein sequenceShow/hide protein sequence
MEATPKLLHGEKLVGSKPNKVKNNVKPQMAINSVANQAKRTSIQSEIRGDLHICLMGDSGVVKSLFKHIINDQNKKHHPLDFNTLKGHEDSATGLCFSSDGSNLTTGNLV
NPTISNFCSLDITFCCCCLYALTKGKYR