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Pay0016728 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0016728
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr01:5045361..5047114
RNA-Seq ExpressionPay0016728
SyntenyPay0016728
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059585.1 uncharacterized protein E6C27_scaffold54G00040 [Cucumis melo var. makuwa]3.4e-4975.86Show/hide
Query:  GVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQARMSEAFDKHVKPRSFQVGDLVLVVRRPIIITRHTGN
        GVTPYSLVYGVEA+L LERE PSLRMV++EGLTT+D+VKLRLQELEALD+KRLEAQQ LECYQARMS+AFDKHVKPRSFQVGDLVL VRRPII TRHTGN
Subjt:  GVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQARMSEAFDKHVKPRSFQVGDLVLVVRRPIIITRHTGN

Query:  EFTPKSNKYYIVNLRKEHPKSSIKTDYKLAQSMENFLRSFMLNLV
        +FTPK +  YIV  ++ +   + K   KLAQS  NFLR+FMLN+V
Subjt:  EFTPKSNKYYIVNLRKEHPKSSIKTDYKLAQSMENFLRSFMLNLV

XP_008462121.1 PREDICTED: uncharacterized protein LOC103500550 [Cucumis melo]3.2e-95100Show/hide
Query:  MEPWTMFFDGVAQRSGAVVGIVFISPKKHVLSYSFTLGVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQ
        MEPWTMFFDGVAQRSGAVVGIVFISPKKHVLSYSFTLGVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQ
Subjt:  MEPWTMFFDGVAQRSGAVVGIVFISPKKHVLSYSFTLGVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQ

Query:  ARMSEAFDKHVKPRSFQVGDLVLVVRRPIIITRHTGNEFTPKSNKYYIVNLRKEHPKSSIKTDYKLAQSMENFLRSFMLNLVM
        ARMSEAFDKHVKPRSFQVGDLVLVVRRPIIITRHTGNEFTPKSNKYYIVNLRKEHPKSSIKTDYKLAQSMENFLRSFMLNLVM
Subjt:  ARMSEAFDKHVKPRSFQVGDLVLVVRRPIIITRHTGNEFTPKSNKYYIVNLRKEHPKSSIKTDYKLAQSMENFLRSFMLNLVM

XP_031737372.1 uncharacterized protein LOC116402244 [Cucumis sativus]1.8e-0529.71Show/hide
Query:  MEPWTMFFDGVAQRSGAVVGIVFISPKKHVLSYSFTLGVTPYSLVYGVEAVLPLERETPSLRMVIKEGLT---TEDDVKLRLQELEALDKKRLEAQQELE
        MEPWTM+FDG A+RSGA  GIV ISP+KH+L YSF L     + V   +A++        L++ ++ G++      D KL + +L      + E  +   
Subjt:  MEPWTMFFDGVAQRSGAVVGIVFISPKKHVLSYSFTLGVTPYSLVYGVEAVLPLERETPSLRMVIKEGLT---TEDDVKLRLQELEALDKKRLEAQQELE

Query:  CYQARMSEAFD----KHV----KPRSFQVGDLVLVVRRPIIITRHTGNEFTPKSNKYYIVNLRKEHPKSSIKTDY
         Y  ++ E FD    +HV      R+  + +L   +  P  +T +      P   ++ I  +R E  + ++ T Y
Subjt:  CYQARMSEAFD----KHV----KPRSFQVGDLVLVVRRPIIITRHTGNEFTPKSNKYYIVNLRKEHPKSSIKTDY

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.5e-4486.61Show/hide
Query:  GVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQARMSEAFDKHVKPRSFQVGDLVLVVRRPIIITRHTGN
        GVTPYSLVYGVEAVLPLERE PSLRM ++EGLTTED+VKLRLQELEALD+KRLEAQQ LECYQARMS+AFDKHVKPRSFQVGDLVL VRRPII TRHTGN
Subjt:  GVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQARMSEAFDKHVKPRSFQVGDLVLVVRRPIIITRHTGN

Query:  EFTPKSNKYYIV
        +FTPK +  YIV
Subjt:  EFTPKSNKYYIV

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.8e-0529.71Show/hide
Query:  MEPWTMFFDGVAQRSGAVVGIVFISPKKHVLSYSFTLGVTPYSLVYGVEAVLPLERETPSLRMVIKEGLT---TEDDVKLRLQELEALDKKRLEAQQELE
        MEPWTM+FDG A+RSGA  GIV ISP+KH+L YSF L     + V   +A++        L++ ++ G++      D KL + +L      + E  +   
Subjt:  MEPWTMFFDGVAQRSGAVVGIVFISPKKHVLSYSFTLGVTPYSLVYGVEAVLPLERETPSLRMVIKEGLT---TEDDVKLRLQELEALDKKRLEAQQELE

Query:  CYQARMSEAFD----KHV----KPRSFQVGDLVLVVRRPIIITRHTGNEFTPKSNKYYIVNLRKEHPKSSIKTDY
         Y  ++ E FD    +HV      R+  + +L   +  P  +T +      P   ++ I  +R E  + ++ T Y
Subjt:  CYQARMSEAFD----KHV----KPRSFQVGDLVLVVRRPIIITRHTGNEFTPKSNKYYIVNLRKEHPKSSIKTDY

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.5e-4486.61Show/hide
Query:  GVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQARMSEAFDKHVKPRSFQVGDLVLVVRRPIIITRHTGN
        GVTPYSLVYGVEAVLPLERE PSLRM ++EGLTTED+VKLRLQELEALD+KRLEAQQ LECYQARMS+AFDKHVKPRSFQVGDLVL VRRPII TRHTGN
Subjt:  GVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQARMSEAFDKHVKPRSFQVGDLVLVVRRPIIITRHTGN

Query:  EFTPKSNKYYIV
        +FTPK +  YIV
Subjt:  EFTPKSNKYYIV

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]1.8e-0529.71Show/hide
Query:  MEPWTMFFDGVAQRSGAVVGIVFISPKKHVLSYSFTLGVTPYSLVYGVEAVLPLERETPSLRMVIKEGLT---TEDDVKLRLQELEALDKKRLEAQQELE
        MEPWTM+FDG A+RSGA  GIV ISP+KH+L YSF L     + V   +A++        L++ ++ G++      D KL + +L      + E  +   
Subjt:  MEPWTMFFDGVAQRSGAVVGIVFISPKKHVLSYSFTLGVTPYSLVYGVEAVLPLERETPSLRMVIKEGLT---TEDDVKLRLQELEALDKKRLEAQQELE

Query:  CYQARMSEAFD----KHV----KPRSFQVGDLVLVVRRPIIITRHTGNEFTPKSNKYYIVNLRKEHPKSSIKTDY
         Y  ++ E FD    +HV      R+  + +L   +  P  +T +      P   ++ I  +R E  + ++ T Y
Subjt:  CYQARMSEAFD----KHV----KPRSFQVGDLVLVVRRPIIITRHTGNEFTPKSNKYYIVNLRKEHPKSSIKTDY

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]1.5e-4486.61Show/hide
Query:  GVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQARMSEAFDKHVKPRSFQVGDLVLVVRRPIIITRHTGN
        GVTPYSLVYGVEAVLPLERE PSLRM ++EGLTTED+VKLRLQELEALD+KRLEAQQ LECYQARMS+AFDKHVKPRSFQVGDLVL VRRPII TRHTGN
Subjt:  GVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQARMSEAFDKHVKPRSFQVGDLVLVVRRPIIITRHTGN

Query:  EFTPKSNKYYIV
        +FTPK +  YIV
Subjt:  EFTPKSNKYYIV

TrEMBL top hitse value%identityAlignment
A0A1S3CG93 uncharacterized protein LOC1035005501.5e-95100Show/hide
Query:  MEPWTMFFDGVAQRSGAVVGIVFISPKKHVLSYSFTLGVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQ
        MEPWTMFFDGVAQRSGAVVGIVFISPKKHVLSYSFTLGVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQ
Subjt:  MEPWTMFFDGVAQRSGAVVGIVFISPKKHVLSYSFTLGVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQ

Query:  ARMSEAFDKHVKPRSFQVGDLVLVVRRPIIITRHTGNEFTPKSNKYYIVNLRKEHPKSSIKTDYKLAQSMENFLRSFMLNLVM
        ARMSEAFDKHVKPRSFQVGDLVLVVRRPIIITRHTGNEFTPKSNKYYIVNLRKEHPKSSIKTDYKLAQSMENFLRSFMLNLVM
Subjt:  ARMSEAFDKHVKPRSFQVGDLVLVVRRPIIITRHTGNEFTPKSNKYYIVNLRKEHPKSSIKTDYKLAQSMENFLRSFMLNLVM

A0A5A7V172 Uncharacterized protein1.7e-4975.86Show/hide
Query:  GVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQARMSEAFDKHVKPRSFQVGDLVLVVRRPIIITRHTGN
        GVTPYSLVYGVEA+L LERE PSLRMV++EGLTT+D+VKLRLQELEALD+KRLEAQQ LECYQARMS+AFDKHVKPRSFQVGDLVL VRRPII TRHTGN
Subjt:  GVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQARMSEAFDKHVKPRSFQVGDLVLVVRRPIIITRHTGN

Query:  EFTPKSNKYYIVNLRKEHPKSSIKTDYKLAQSMENFLRSFMLNLV
        +FTPK +  YIV  ++ +   + K   KLAQS  NFLR+FMLN+V
Subjt:  EFTPKSNKYYIVNLRKEHPKSSIKTDYKLAQSMENFLRSFMLNLV

A0A5A7VE52 Integrase catalytic domain-containing protein1.4e-4384.82Show/hide
Query:  GVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQARMSEAFDKHVKPRSFQVGDLVLVVRRPIIITRHTGN
        GVTPYSLVYGVEAVLPLERE PSLRM ++EGLTTED+VKLRLQ+LEALD+KRLEAQQ LECYQARMS+AF KHVKPRSFQVGDLVL VRRPII TRHTGN
Subjt:  GVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQARMSEAFDKHVKPRSFQVGDLVLVVRRPIIITRHTGN

Query:  EFTPKSNKYYIV
        +FTPK +  YIV
Subjt:  EFTPKSNKYYIV

A0A5D3BQV3 Integrase catalytic domain-containing protein7.3e-4570.63Show/hide
Query:  LGVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQARMSEAFDKHVKPRSFQVGDLVLVVRRPIIITRHTG
        +GVTPYSLVYGVE VLPLERE PSLRM ++EGLTTED+VKLRLQELEALD+KRLEAQQ LECYQ RMS+AFDKHVKPRSFQVGDLVL VRRPII TRHTG
Subjt:  LGVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQARMSEAFDKHVKPRSFQVGDLVLVVRRPIIITRHTG

Query:  NEFTPKSNKYYIVNLRKEHPKSSI--KTDYKLAQSMENFLRSF
        N+FTPK ++ YIV    ++    I  +   K+    E FL+ F
Subjt:  NEFTPKSNKYYIVNLRKEHPKSSI--KTDYKLAQSMENFLRSF

A0A5D3C379 Integrase catalytic domain-containing protein4.7e-4484.07Show/hide
Query:  LGVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQARMSEAFDKHVKPRSFQVGDLVLVVRRPIIITRHTG
        +GVTPYSLVYGVE VLPLERE PSLRM ++EGLTTED+VKLRLQELEALD+KRLEAQQ LECYQARMS+AF KHVKPRSFQVGDLVL VRRPII TRHTG
Subjt:  LGVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQARMSEAFDKHVKPRSFQVGDLVLVVRRPIIITRHTG

Query:  NEFTPKSNKYYIV
        N+FTPK +  YIV
Subjt:  NEFTPKSNKYYIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCCTTGGACCATGTTCTTTGATGGTGTGGCACAAAGAAGTGGAGCTGTTGTCGGTATTGTCTTCATCTCACCTAAGAAACACGTGTTGTCATATAGCTTCACACT
CGGTGTTACACCTTATTCTTTGGTTTACGGAGTAGAAGCAGTACTCCCACTGGAAAGAGAAACTCCATCCTTGAGAATGGTAATTAAAGAAGGGCTAACTACTGAAGACG
ATGTTAAATTACGACTTCAAGAGTTAGAAGCACTTGATAAAAAGAGACTAGAAGCTCAACAAGAACTAGAATGTTATCAAGCACGAATGTCTGAGGCTTTTGACAAACAT
GTAAAGCCCCGGTCATTTCAAGTTGGTGATTTAGTGCTTGTAGTAAGAAGACCTATTATCATAACGAGGCATACGGGGAATGAGTTCACACCTAAATCAAACAAATATTA
CATCGTCAATTTACGAAAGGAGCATCCAAAATCATCGATCAAGACGGATTACAAATTGGCCCAATCAATGGAAAATTTCTTAAGAAGTTTTATGCTTAATTTAGTTATGT
AA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCCTTGGACCATGTTCTTTGATGGTGTGGCACAAAGAAGTGGAGCTGTTGTCGGTATTGTCTTCATCTCACCTAAGAAACACGTGTTGTCATATAGCTTCACACT
CGGTGTTACACCTTATTCTTTGGTTTACGGAGTAGAAGCAGTACTCCCACTGGAAAGAGAAACTCCATCCTTGAGAATGGTAATTAAAGAAGGGCTAACTACTGAAGACG
ATGTTAAATTACGACTTCAAGAGTTAGAAGCACTTGATAAAAAGAGACTAGAAGCTCAACAAGAACTAGAATGTTATCAAGCACGAATGTCTGAGGCTTTTGACAAACAT
GTAAAGCCCCGGTCATTTCAAGTTGGTGATTTAGTGCTTGTAGTAAGAAGACCTATTATCATAACGAGGCATACGGGGAATGAGTTCACACCTAAATCAAACAAATATTA
CATCGTCAATTTACGAAAGGAGCATCCAAAATCATCGATCAAGACGGATTACAAATTGGCCCAATCAATGGAAAATTTCTTAAGAAGTTTTATGCTTAATTTAGTTATGT
AA
Protein sequenceShow/hide protein sequence
MEPWTMFFDGVAQRSGAVVGIVFISPKKHVLSYSFTLGVTPYSLVYGVEAVLPLERETPSLRMVIKEGLTTEDDVKLRLQELEALDKKRLEAQQELECYQARMSEAFDKH
VKPRSFQVGDLVLVVRRPIIITRHTGNEFTPKSNKYYIVNLRKEHPKSSIKTDYKLAQSMENFLRSFMLNLVM